Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.UILT17 Arachis hypogaea HOM05D005645 ORTHO05D007156 8.2e-145 516.9 240 100.0
arahy.Tifrunner.gnm1.ann1.G1675E Arachis hypogaea HOM05D005645 ORTHO05D007156 1.2e-140 503.1 240 97.5
Lalb_Chr06g0163461 Lupinus albus HOM05D005645 ORTHO05D007156 8.1e-76 287.7 244 58.6
Lj1g0011611 Lotus japonicus HOM05D005645 ORTHO05D007156 4.6e-71 271.9 319 47.3
Phvul.007G146000 Phaseolus vulgaris HOM05D005645 ORTHO05D007156 1.3e-70 270.4 238 57.6
GSVIVG01028000001 Vitis vinifera HOM05D005645 ORTHO05D007156 1.9e-69 266.5 248 54.4
Oeu011455.1 Olea europaea HOM05D005645 ORTHO05D007156 2.8e-68 262.7 252 52.8
VMungo0720G2164 Vigna mungo HOM05D005645 ORTHO05D007156 8.1e-68 261.2 235 56.2
TWI23G0499 Tripterygium wilfordii HOM05D005645 ORTHO05D007156 1.1e-67 260.8 336 44.0
Ciclev10021114m.g Citrus clementina HOM05D005645 ORTHO05D007156 1.4e-67 260.4 334 44.0
Cfa005921 Carpinus fangiana HOM05D005645 ORTHO05D007156 2.3e-67 259.6 342 44.7
CSS0005125 Camellia sinensis var. sinensis HOM05D005645 ORTHO05D007156 5.2e-67 258.5 334 43.7
CiPaw.08G095700 Carya illinoinensis HOM05D005645 ORTHO05D007156 6.8e-67 258.1 339 43.1
PGR119G1100 Punica granatum HOM05D005645 ORTHO05D007156 8.9e-67 257.7 332 43.7
arahy.Tifrunner.gnm1.ann1.LF73V2 Arachis hypogaea HOM05D005645 ORTHO05D007156 1.2e-66 257.3 318 45.9
Cpa.g.c27813 Carica papaya HOM05D005645 ORTHO05D007156 2.6e-66 256.1 325 43.1
RcHm_v2.0_Chr6g0293871 Rosa chinensis HOM05D005645 ORTHO05D007156 3.4e-66 255.8 320 43.8
Atru.chr5.1154 Acer truncatum HOM05D005645 ORTHO05D007156 4.4e-66 255.4 329 42.9
Carub.0006s3469 Capsella rubella HOM05D005645 ORTHO05D007156 5.8e-66 255.0 327 42.8
Manes.05G062500 Manihot esculenta HOM05D005645 ORTHO05D007156 7.6e-66 254.6 329 43.8
Lalb_Chr18g0047021 Lupinus albus HOM05D005645 ORTHO05D007156 9.9e-66 254.2 330 45.5
Dinv19699 Davidia involucrata HOM05D005645 ORTHO05D007156 1.7e-65 253.4 340 41.8
Duzib138G1290 Durio zibethinus HOM05D005645 ORTHO05D007156 1.7e-65 253.4 336 42.6
AT4G02440 Arabidopsis thaliana HOM05D005645 ORTHO05D007156 2.9e-65 252.7 341 42.8
COL.COLO4_23354 Corchorus olitorius HOM05D005645 ORTHO05D007156 2.9e-65 252.7 327 43.4
Gohir.A12G130800 Gossypium hirsutum HOM05D005645 ORTHO05D007156 2.9e-65 252.7 333 42.9
Gorai.008G145600 Gossypium raimondii HOM05D005645 ORTHO05D007156 2.9e-65 252.7 333 43.2
VMungo1383G2661 Vigna mungo HOM05D005645 ORTHO05D007156 2.9e-65 252.7 313 46.3
Thecc.01G299500 Theobroma cacao HOM05D005645 ORTHO05D007156 3.8e-65 252.3 333 43.2
Phvul.001G207000 Phaseolus vulgaris HOM05D005645 ORTHO05D007156 6.4e-65 251.5 320 45.0
FAN27G1772 Fragaria x ananassa HOM05D005645 ORTHO05D007156 8.4e-65 251.1 308 44.8
TPR.G9640 Trifolium pratense HOM05D005645 ORTHO05D007156 1.4e-64 250.4 305 45.6
Medtr7g108820 Medicago truncatula HOM05D005645 ORTHO05D007156 1.9e-64 250.0 312 44.6
Medtr8g058520 Medicago truncatula HOM05D005645 ORTHO05D007156 1.9e-64 250.0 312 44.6
AL6G50630 Arabidopsis lyrata HOM05D005645 ORTHO05D007156 2.4e-64 249.6 331 43.2
THA.LOC109115977 Tarenaya hassleriana HOM05D005645 ORTHO05D007156 2.4e-64 249.6 339 43.1
Glyma.02G018450 Glycine max HOM05D005645 ORTHO05D007156 3.2e-64 249.2 242 52.5
MBI19_g25350_MAGBIO Magnolia biondii HOM05D005645 ORTHO05D007156 3.2e-64 249.2 343 42.9
FvH4_2g25611 Fragaria vesca HOM05D005645 ORTHO05D007156 4.1e-64 248.8 310 44.2
Gohir.D08G085100 Gossypium hirsutum HOM05D005645 ORTHO05D007156 4.1e-64 248.8 336 42.9
Sp6g02350 Schrenkiella parvula HOM05D005645 ORTHO05D007156 7.1e-64 248.1 339 41.9
CARHR250710 Cardamine hirsuta HOM05D005645 ORTHO05D007156 9.2e-64 247.7 336 42.3
Lj2P1193T28 Lonicera japonica HOM05D005645 ORTHO05D007156 9.2e-64 247.7 338 42.0
Glyma.03G214300 Glycine max HOM05D005645 ORTHO05D007156 2.1e-63 246.5 324 43.8
Prupe.8G260500 Prunus persica HOM05D005645 ORTHO05D007156 2.1e-63 246.5 331 42.3
Psat3g022200 Pisum sativum HOM05D005645 ORTHO05D007156 2.7e-63 246.1 314 43.9
Migut.D00211 Erythranthe guttata HOM05D005645 ORTHO05D007156 4.6e-63 245.4 333 42.0
Migut.N01502 Erythranthe guttata HOM05D005645 ORTHO05D007156 4.6e-63 245.4 297 43.4
Gorai.004G089600 Gossypium raimondii HOM05D005645 ORTHO05D007156 4.6e-63 245.4 336 42.9
Potri.002G205150 Populus trichocarpa HOM05D005645 ORTHO05D007156 4.6e-63 245.4 331 42.3
QL12p028562 Quercus lobata HOM05D005645 ORTHO05D007156 4.6e-63 245.4 330 41.8
Sabra14G0096600 Salix brachista HOM05D005645 ORTHO05D007156 4.6e-63 245.4 339 41.9
Duzib133G0671 Durio zibethinus HOM05D005645 ORTHO05D007156 6.0e-63 245.0 333 41.1
Gohir.A08G075600 Gossypium hirsutum HOM05D005645 ORTHO05D007156 6.0e-63 245.0 336 42.6
Solyc09g075080.3 Solanum lycopersicum HOM05D005645 ORTHO05D007156 6.0e-63 245.0 327 42.8
EL10Ac7g17501 Beta vulgaris HOM05D005645 ORTHO05D007156 7.8e-63 244.6 339 41.3
CiPaw.07G108000 Carya illinoinensis HOM05D005645 ORTHO05D007156 7.8e-63 244.6 330 42.1
Cc01_g20770 Coffea canephora HOM05D005645 ORTHO05D007156 7.8e-63 244.6 331 41.7
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 7.8e-63 244.6 305 44.3
Rhsim01G0284600 Rhododendron simsii HOM05D005645 ORTHO05D007156 7.8e-63 244.6 347 40.9
Sopen09g029900 Solanum pennellii HOM05D005645 ORTHO05D007156 1.0e-62 244.2 327 42.5
Eucgr.H01116 Eucalyptus grandis HOM05D005645 ORTHO05D007156 1.3e-62 243.8 351 39.9
Hma1.2p1_0491F.1_g164480 Hydrangea macrophylla HOM05D005645 ORTHO05D007156 1.3e-62 243.8 348 41.1
TAR365G0052 Trochodendron aralioides HOM05D005645 ORTHO05D007156 1.7e-62 243.4 331 42.6
Aa31LG5G2090 Aethionema arabicum HOM05D005645 ORTHO05D007156 3.9e-62 242.3 339 40.7
ClCG10G010870 Citrullus lanatus HOM05D005645 ORTHO05D007156 3.9e-62 242.3 338 42.0
Ca_09155_v3 Cicer arietinum L. HOM05D005645 ORTHO05D007156 8.6e-62 241.1 143 75.5
Duzib211G0390 Durio zibethinus HOM05D005645 ORTHO05D007156 8.6e-62 241.1 333 41.7
Lsat_1_v5_gn_8_53521 Lactuca sativa HOM05D005645 ORTHO05D007156 8.6e-62 241.1 340 41.5
CANSAT25G0541 Cannabis sativa HOM05D005645 ORTHO05D007156 1.1e-61 240.7 332 41.0
Potri.014G130000 Populus trichocarpa HOM05D005645 ORTHO05D007156 1.1e-61 240.7 334 41.3
Sabra02G0154200 Salix brachista HOM05D005645 ORTHO05D007156 1.1e-61 240.7 332 41.9
SGA_v2.0_scaffold1G00372 Striga asiatica HOM05D005645 ORTHO05D007156 1.1e-61 240.7 328 40.9
AUR62008638 Chenopodium quinoa HOM05D005645 ORTHO05D007156 1.5e-61 240.4 360 39.7
PGSC0003DMG400011401 Solanum tuberosum HOM05D005645 ORTHO05D007156 1.5e-61 240.4 333 40.8
DCAR_002826 Daucus carota HOM05D005645 ORTHO05D007156 1.9e-61 240.0 344 40.7
Nn4g25798 Nelumbo nucifera HOM05D005645 ORTHO05D007156 1.9e-61 240.0 333 41.1
HPP92_025206 Vanilla planifolia HOM05D005645 ORTHO05D007156 1.9e-61 240.0 322 45.7
CsaV3_4G000750 Cucumis sativus L. HOM05D005645 ORTHO05D007156 3.3e-61 239.2 340 41.5
Aqoxy2G02954 Aquilegia oxysepala HOM05D005645 ORTHO05D007156 9.6e-61 237.7 331 41.1
HanXRQChr04g0118021 Helianthus annuus HOM05D005645 ORTHO05D007156 9.6e-61 237.7 342 40.4
TAR370G0004 Trochodendron aralioides HOM05D005645 ORTHO05D007156 1.2e-60 237.3 334 41.3
Lsat_1_v5_gn_5_191140 Lactuca sativa HOM05D005645 ORTHO05D007156 1.6e-60 236.9 341 39.9
MD03G1287400 Malus domestica HOM05D005645 ORTHO05D007156 1.6e-60 236.9 346 40.2
MD11G1310800 Malus domestica HOM05D005645 ORTHO05D007156 3.6e-60 235.7 351 39.6
Sc09g0004020 Simmondsia chinensis HOM05D005645 ORTHO05D007156 1.4e-59 233.8 320 42.2
AUR62033135 Chenopodium quinoa HOM05D005645 ORTHO05D007156 2.4e-59 233.0 359 39.3
SHI29059 Sapria himalayana HOM05D005645 ORTHO05D007156 2.4e-59 233.0 247 50.2
PSO170G2082 Papaver somniferum HOM05D005645 ORTHO05D007156 5.2e-59 231.9 339 40.4
SGA_v2.0_scaffold2G01399 Striga asiatica HOM05D005645 ORTHO05D007156 5.2e-59 231.9 342 39.8
Sed0022873 Sechium edule HOM05D005645 ORTHO05D007156 8.9e-59 231.1 327 40.7
SalBow3G0280 Salvia bowleyana HOM05D005645 ORTHO05D007156 1.2e-58 230.7 338 39.6
BcaB01g02041 Brassica carinata HOM05D005645 ORTHO05D007156 2.6e-58 229.6 364 38.2
DCAR_018339 Daucus carota HOM05D005645 ORTHO05D007156 3.4e-58 229.2 298 43.3
Nitab4.5_0001879g0020 Nicotiana tabacum HOM05D005645 ORTHO05D007156 3.4e-58 229.2 145 68.3
Nitab4.5_0008207g0010 Nicotiana tabacum HOM05D005645 ORTHO05D007156 7.6e-58 228.0 140 70.0
Peaxi162Scf00001g00452 Petunia axillaris HOM05D005645 ORTHO05D007156 9.9e-58 227.6 140 69.3
CAN.G1628.1 Capsicum annuum HOM05D005645 ORTHO05D007156 1.7e-57 226.9 145 66.2
PSO210G7211 Papaver somniferum HOM05D005645 ORTHO05D007156 2.2e-57 226.5 338 40.2
MELO3C017961.2 Cucumis melo HOM05D005645 ORTHO05D007156 6.4e-57 224.9 145 66.2
BcaNung05002 Brassica carinata HOM05D005645 ORTHO05D007156 4.2e-56 222.2 146 66.4
Sed0014780 Sechium edule HOM05D005645 ORTHO05D007156 7.1e-56 221.5 145 64.8
Actinidia21051 Actinidia chinensis HOM05D005645 ORTHO05D007156 1.6e-55 220.3 316 42.1
CDE11G0431 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 7.8e-55 218.0 142 66.2
C09p01980 Brassica napus HOM05D005645 ORTHO05D007156 1.3e-54 217.2 146 65.8
BcaNung04054 Brassica carinata HOM05D005645 ORTHO05D007156 1.7e-54 216.9 146 65.8
BraA09t35841Z Brassica rapa HOM05D005645 ORTHO05D007156 3.9e-54 215.7 146 65.1
ECA236G0211 Erigeron canadensis HOM05D005645 ORTHO05D007156 3.9e-54 215.7 340 37.9
SMO331G0040 Selaginella moellendorffii HOM05D005645 ORTHO05D007156 5.1e-54 215.3 270 44.8
A09p01900 Brassica napus HOM05D005645 ORTHO05D007156 1.1e-53 214.2 146 64.4
BolC9t53130H Brassica oleracea HOM05D005645 ORTHO05D007156 7.3e-53 211.5 146 64.4
HPP92_018255 Vanilla planifolia HOM05D005645 ORTHO05D007156 3.6e-52 209.1 243 49.0
ATR0796G303 Amborella trichopoda HOM05D005645 ORTHO05D007156 1.1e-51 207.6 143 65.7
FAN15G1997 Fragaria x ananassa HOM05D005645 ORTHO05D007156 5.8e-50 201.8 274 42.3
CAN.G339.1 Capsicum annuum HOM05D005645 ORTHO05D007156 3.8e-49 199.1 132 65.2
Os05g0365000 Oryza sativa ssp. japonica HOM05D005645 ORTHO05D007156 8.4e-49 198.0 329 37.4
SEGI_05916 Sequoiadendron giganteum HOM05D005645 ORTHO05D007156 2.4e-48 196.4 146 58.9
Zm00001eb346660 Zea mays HOM05D005645 ORTHO05D007156 5.4e-48 195.3 155 57.4
Dinv33051 Davidia involucrata HOM05D005645 ORTHO05D007156 2.7e-47 193.0 124 66.9
Mapoly0034s0045 Marchantia polymorpha HOM05D005645 ORTHO05D007156 1.3e-46 190.7 142 62.7
Nn3g21470 Nelumbo nucifera HOM05D005645 ORTHO05D007156 3.0e-46 189.5 276 41.7
AagrBONN_evm.TU.Sc2ySwM_228.5415 Anthoceros agrestis HOM05D005645 ORTHO05D007156 6.7e-46 188.3 144 58.3
Pp3c4_3650 Physcomitrium patens HOM05D005645 ORTHO05D007156 2.1e-44 183.3 149 55.0
CSS0029794 Camellia sinensis var. sinensis HOM05D005645 ORTHO05D007156 2.9e-41 172.9 125 62.4
Pp3c12_6520 Physcomitrium patens HOM05D005645 ORTHO05D007156 4.9e-41 172.2 131 56.5
Actinidia24827 Actinidia chinensis HOM05D005645 ORTHO05D007156 4.8e-36 155.6 266 36.8
MD05G1102300 Malus domestica HOM05D005645 ORTHO05D007156 5.5e-32 142.1 102 59.8
AagrBONN_evm.TU.Sc2ySwM_117.1647 Anthoceros agrestis HOM05D005645 ORTHO05D007156 1.4e-27 127.5 133 45.9
Oeu046686.1 Olea europaea HOM05D005645 ORTHO05D007156 7.2e-16 88.6 172 32.6
TWI59G0946 Tripterygium wilfordii HOM05D005645 ORTHO05D007156 9.7e-13 78.2 124 40.3
CDE05G1077 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 5.0e-09 65.9 116 42.2
Zm00001eb108420 Zea mays HOM05D002394 ORTHO05D002508 9.4e-08 61.6 247 28.3
Haze_04922 Corylus avellana HOM05D005645 ORTHO05D007156 8.0e-07 58.5 101 40.6
Haze_04926 Corylus avellana HOM05D005645 ORTHO05D007156 1.0e-06 58.2 101 40.6


User provided reference genes

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