Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 1.0e-90 336.7 161 100.0
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 5.6e-89 330.9 161 98.8
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 5.2e-71 271.2 161 80.1
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 6.8e-71 270.8 158 81.0
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 8.9e-71 270.4 161 78.9
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 1.1e-68 263.5 161 79.5
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 1.1e-68 263.5 161 78.3
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 1.9e-68 262.7 161 77.6
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 3.2e-68 261.9 158 79.7
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 1.1e-65 253.4 152 80.3
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 1.1e-65 253.4 155 78.7
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 1.9e-65 252.7 158 73.4
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 7.3e-65 250.8 152 78.9
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 2.1e-64 249.2 161 77.6
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 1.4e-63 246.5 160 72.5
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 3.1e-63 245.4 163 74.2
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 4.0e-63 245.0 158 73.4
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 6.9e-63 244.2 159 74.2
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 2.0e-62 242.7 158 72.2
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 2.0e-62 242.7 152 78.3
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 2.0e-62 242.7 152 75.0
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 2.6e-62 242.3 162 77.2
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 8.4e-61 237.3 147 75.5
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 8.4e-61 237.3 150 74.7
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 5.4e-60 234.6 151 72.8
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 5.4e-60 234.6 152 75.7
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 7.1e-60 234.2 154 72.7
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 2.7e-59 232.3 150 75.3
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 4.6e-59 231.5 159 71.1
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 6.0e-59 231.1 153 71.9
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 6.0e-59 231.1 162 69.1
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 1.1e-57 226.9 161 67.7
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 1.5e-57 226.5 159 69.2
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 3.3e-57 225.3 159 69.8
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 3.3e-57 225.3 159 69.8
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 4.3e-57 224.9 145 76.6
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 1.3e-56 223.4 160 69.4
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 1.3e-56 223.4 160 69.4
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 1.6e-56 223.0 160 69.4
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 3.6e-56 221.9 147 72.8
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 6.2e-56 221.1 160 67.5
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 8.1e-56 220.7 145 73.8
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 8.1e-56 220.7 146 72.6
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 8.1e-56 220.7 147 72.1
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 8.1e-56 220.7 147 73.5
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 1.1e-55 220.3 164 65.9
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 1.8e-55 219.5 160 68.1
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 3.1e-55 218.8 146 69.9
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 6.9e-55 217.6 151 69.5
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 3.4e-54 215.3 147 70.7
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 3.4e-54 215.3 147 70.7
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 7.6e-54 214.2 146 68.5
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 2.9e-53 212.2 150 68.0
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 2.9e-53 212.2 147 71.4
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 1.4e-52 209.9 149 69.1
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 1.9e-52 209.5 145 70.3
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 2.7e-51 205.7 141 70.2
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 2.7e-51 205.7 146 67.8
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 1.8e-50 203.0 148 68.9
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 2.3e-50 202.6 146 68.5
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 3.9e-50 201.8 146 67.8
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 8.7e-50 200.7 148 65.5
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 1.1e-49 200.3 151 66.9
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 2.5e-49 199.1 151 66.2
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 7.4e-49 197.6 144 66.0
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 3.4e-46 188.7 144 66.0
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 4.5e-46 188.3 153 61.4
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 4.5e-46 188.3 158 61.4
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 2.2e-45 186.0 159 60.4
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 8.4e-45 184.1 134 67.9
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 4.2e-44 181.8 132 68.2
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 5.5e-44 181.4 147 59.9
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 3.9e-42 175.3 161 57.1
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 1.5e-41 173.3 134 64.9
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 8.4e-37 157.5 109 67.0
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 2.1e-35 152.9 146 53.4
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 3.5e-35 152.1 162 50.6
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 3.5e-35 152.1 162 49.4
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 3.5e-35 152.1 162 49.4
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 4.6e-35 151.8 162 49.4
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 7.9e-35 151.0 162 50.6
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 1.8e-34 149.8 152 52.6
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 1.8e-34 149.8 162 48.8
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 1.8e-34 149.8 162 48.8
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 2.3e-34 149.4 162 49.4
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 3.0e-34 149.1 160 49.4
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 6.7e-34 147.9 162 50.6
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 8.7e-34 147.5 145 51.7
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 5.7e-33 144.8 138 53.6
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 5.0e-29 131.7 138 46.4
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 8.5e-29 131.0 126 52.4
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 1.5e-22 110.2 68 73.5
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 2.6e-22 109.4 97 59.8
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 1.3e-21 107.1 70 72.9
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 2.1e-19 99.8 71 70.4
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 1.8e-18 96.7 62 67.7
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 1.2e-14 84.0 116 38.8
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 5.9e-14 81.6 116 37.9


User provided reference genes

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