Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.UG07JB Arachis hypogaea HOM05D000219 ORTHO05D086492 4.6e-39 164.1 83 100.0
Sp5g32240 Schrenkiella parvula HOM05D000219 ORTHO05D000226 1.3e-12 76.3 94 50.0
Psat5g081480 Pisum sativum HOM05D000219 ORTHO05D000226 1.0e-09 66.6 117 39.3
SGA_v2.0_scaffold25G11155 Striga asiatica HOM05D000219 ORTHO05D000226 1.9e-08 62.4 106 37.7
Lj1g0006254 Lotus japonicus HOM05D000219 ORTHO05D000226 3.2e-08 61.6 114 37.7
MD05G1014600 Malus domestica HOM05D000219 ORTHO05D000226 9.4e-08 60.1 117 36.8
RhsimUnG0133100 Rhododendron simsii HOM05D000219 ORTHO05D000226 9.4e-08 60.1 108 36.1
Sed0010141 Sechium edule HOM05D000219 ORTHO05D000226 1.6e-07 59.3 140 33.6
Haze_17701 Corylus avellana HOM05D000219 ORTHO05D000226 2.7e-07 58.5 102 39.2
Psat5g081280 Pisum sativum HOM05D000219 ORTHO05D000226 3.6e-07 58.2 138 32.6
AL2G37290 Arabidopsis lyrata HOM05D000219 ORTHO05D000226 6.1e-07 57.4 138 32.6
Carub.0002s2400 Capsella rubella HOM05D000219 ORTHO05D000226 6.1e-07 57.4 138 32.6
MELO3C023685.2 Cucumis melo HOM05D000219 ORTHO05D000226 8.0e-07 57.0 138 31.9
Lj1g0014916 Lotus japonicus HOM05D000219 ORTHO05D000226 8.0e-07 57.0 134 33.6
Psat5g080800 Pisum sativum HOM05D000219 ORTHO05D000226 8.0e-07 57.0 138 32.6
TPR.G18767 Trifolium pratense HOM05D000219 ORTHO05D000226 8.0e-07 57.0 138 31.9
AT1G77120 Arabidopsis thaliana HOM05D000219 ORTHO05D000226 1.0e-06 56.6 138 32.6
arahy.Tifrunner.gnm1.ann1.66WYUB Arachis hypogaea HOM05D000219 ORTHO05D000226 1.0e-06 56.6 138 33.3
arahy.Tifrunner.gnm1.ann1.LLG5IK Arachis hypogaea HOM05D000219 ORTHO05D000226 1.0e-06 56.6 138 33.3
BcaC08g47209 Brassica carinata HOM05D000219 ORTHO05D000226 1.0e-06 56.6 138 32.6
BcaNung04778 Brassica carinata HOM05D000219 ORTHO05D000226 1.0e-06 56.6 138 32.6
A07p42690 Brassica napus HOM05D000219 ORTHO05D000226 1.0e-06 56.6 138 32.6
C06p51280 Brassica napus HOM05D000219 ORTHO05D000226 1.0e-06 56.6 138 32.6
BolC6t40149H Brassica oleracea HOM05D000219 ORTHO05D000226 1.0e-06 56.6 138 32.6
BraA07t31791Z Brassica rapa HOM05D000219 ORTHO05D000226 1.0e-06 56.6 138 32.6
RcHm_v2.0_Chr6g0277281 Rosa chinensis HOM05D000219 ORTHO05D000226 1.0e-06 56.6 138 31.9
vmacro12817 Vaccinium macrocarpon HOM05D000219 ORTHO05D000226 1.0e-06 56.6 138 31.9
Aa31LG7G5410 Aethionema arabicum HOM05D000219 ORTHO05D000226 1.4e-06 56.2 138 31.9
Lj7A364G77 Lonicera japonica HOM05D000219 ORTHO05D000226 1.4e-06 56.2 115 33.9
THA.LOC104798873 Tarenaya hassleriana HOM05D000219 ORTHO05D000226 1.4e-06 56.2 138 31.9
THA.LOC104812075 Tarenaya hassleriana HOM05D000219 ORTHO05D000226 1.4e-06 56.2 138 31.9
vmacro12866 Vaccinium macrocarpon HOM05D000219 ORTHO05D000226 1.4e-06 56.2 138 31.2
A07p28080 Brassica napus HOM05D000219 ORTHO05D000226 1.8e-06 55.8 138 32.6
BraA07t30453Z Brassica rapa HOM05D000219 ORTHO05D000226 1.8e-06 55.8 138 32.6
AUR62026788 Chenopodium quinoa HOM05D000219 ORTHO05D000226 1.8e-06 55.8 138 31.2
Eucgr.I00224 Eucalyptus grandis HOM05D000219 ORTHO05D000226 1.8e-06 55.8 138 31.2
FAN15G0805 Fragaria x ananassa HOM05D000219 ORTHO05D000226 1.8e-06 55.8 133 32.3
BcaNung04686 Brassica carinata HOM05D000219 ORTHO05D000226 2.3e-06 55.5 138 31.9
C06p31450 Brassica napus HOM05D000219 ORTHO05D000226 2.3e-06 55.5 138 31.9
BolC6t38278H Brassica oleracea HOM05D000219 ORTHO05D000226 2.3e-06 55.5 138 31.9
Thhalv10018716m.g Eutrema salsugineum HOM05D000219 ORTHO05D000226 2.3e-06 55.5 138 31.9
FvH4_2g14750 Fragaria vesca HOM05D000219 ORTHO05D000226 2.3e-06 55.5 138 31.2
FAN06G3718 Fragaria x ananassa HOM05D000219 ORTHO05D000226 2.3e-06 55.5 138 31.2
FAN24G3500 Fragaria x ananassa HOM05D000219 ORTHO05D000226 2.3e-06 55.5 138 31.2
Glyma.04G240800 Glycine max HOM05D000219 ORTHO05D000226 2.3e-06 55.5 138 31.9
Medtr3g089977 Medicago truncatula HOM05D000219 ORTHO05D000226 2.3e-06 55.5 138 31.9
RcHm_v2.0_Chr1g0331561 Rosa chinensis HOM05D000219 ORTHO05D000226 2.3e-06 55.5 138 31.2
Atru.chr4.853 Acer truncatum HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 31.2
Ah.05g167520 Amaranthus hybridus HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 31.2
Cfa018367 Carpinus fangiana HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 31.9
AUR62013484 Chenopodium quinoa HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 31.2
Haze_17702 Corylus avellana HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 31.9
CsaV3_7G024950 Cucumis sativus L. HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 31.2
Hma1.2p1_0528F.1_g173090 Hydrangea macrophylla HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 30.4
Medtr3g089940 Medicago truncatula HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 31.9
Medtr3g089970 Medicago truncatula HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 31.9
Phvul.009G134700 Phaseolus vulgaris HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 31.2
Potri.005G060000 Populus trichocarpa HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 31.2
Prupe.8G018300 Prunus persica HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 31.2
QL02p025396 Quercus lobata HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 31.2
THA.LOC104806844 Tarenaya hassleriana HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 31.2
VMungo1309G1804 Vigna mungo HOM05D000219 ORTHO05D000226 3.0e-06 55.1 138 31.2
Cfa018368 Carpinus fangiana HOM05D000219 ORTHO05D000226 4.0e-06 54.7 134 31.3
CsaV3_7G024990 Cucumis sativus L. HOM05D000219 ORTHO05D000226 4.0e-06 54.7 138 31.2
Dinv24336 Davidia involucrata HOM05D000219 ORTHO05D005852 4.0e-06 54.7 138 31.2
MD05G1013400 Malus domestica HOM05D000219 ORTHO05D000226 4.0e-06 54.7 138 31.2
MD10G1014500 Malus domestica HOM05D000219 ORTHO05D000226 4.0e-06 54.7 138 31.2
PGR042G1798 Punica granatum HOM05D000219 ORTHO05D000226 4.0e-06 54.7 138 31.2
Sabra07G0088800 Salix brachista HOM05D000219 ORTHO05D000226 4.0e-06 54.7 138 31.2
Thecc.08G144200 Theobroma cacao HOM05D000219 ORTHO05D000226 4.0e-06 54.7 138 31.2
TWI32G1133 Tripterygium wilfordii HOM05D000219 ORTHO05D000226 4.0e-06 54.7 146 30.8
BcaB02g07096 Brassica carinata HOM05D000219 ORTHO05D000226 5.2e-06 54.3 137 31.4
Manes.02G174800 Manihot esculenta HOM05D000219 ORTHO05D000226 5.2e-06 54.3 138 31.2
Manes.18G087401 Manihot esculenta HOM05D000219 ORTHO05D000226 5.2e-06 54.3 138 31.2
PSO541G3124 Papaver somniferum HOM05D000219 ORTHO05D000226 5.2e-06 54.3 138 31.2
Peaxi162Scf00263g00219 Petunia axillaris HOM05D000219 ORTHO05D000226 5.2e-06 54.3 128 31.2
QL02p025444 Quercus lobata HOM05D000219 ORTHO05D000226 5.2e-06 54.3 138 30.4
QL11p027207 Quercus lobata HOM05D000219 ORTHO05D000226 5.2e-06 54.3 138 31.2
QL11p027283 Quercus lobata HOM05D000219 ORTHO05D000226 5.2e-06 54.3 138 31.2
vmacro00891 Vaccinium macrocarpon HOM05D000219 ORTHO05D000226 5.2e-06 54.3 102 37.3
CiPaw.15G021800 Carya illinoinensis HOM05D000219 ORTHO05D004649 6.8e-06 53.9 138 31.2
Psat5g081320 Pisum sativum HOM05D000219 ORTHO05D000226 6.8e-06 53.9 138 31.2
Prupe.8G018400 Prunus persica HOM05D000219 ORTHO05D000226 6.8e-06 53.9 138 30.4
Ciclev10001382m.g Citrus clementina HOM05D000219 ORTHO05D000226 8.8e-06 53.5 138 30.4
Lj4A848G69 Lonicera japonica HOM05D000219 ORTHO05D000226 8.8e-06 53.5 115 33.9
Lj1g0016695 Lotus japonicus HOM05D000219 ORTHO05D000226 8.8e-06 53.5 138 30.4
Potri.007G108401 Populus trichocarpa HOM05D000219 ORTHO05D000226 8.8e-06 53.5 138 30.4
Potri.007G108601 Populus trichocarpa HOM05D000219 ORTHO05D000226 8.8e-06 53.5 138 30.4
Prupe.8G018600 Prunus persica HOM05D000219 ORTHO05D000226 8.8e-06 53.5 138 29.7
QL02p025407 Quercus lobata HOM05D000219 ORTHO05D000226 8.8e-06 53.5 138 31.2
QL02p025418 Quercus lobata HOM05D000219 ORTHO05D000226 8.8e-06 53.5 138 31.2
QL11p027189 Quercus lobata HOM05D000219 ORTHO05D000226 8.8e-06 53.5 138 29.7
Sed0021475 Sechium edule HOM05D000219 ORTHO05D000226 8.8e-06 53.5 138 30.4
TWI53G1919 Tripterygium wilfordii HOM05D000219 ORTHO05D000226 8.8e-06 53.5 138 31.2


User provided reference genes

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