Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.UDA7AK Arachis hypogaea HOM05D008272 ORTHO05D010429 3.0e-173 611.7 300 100.0
arahy.Tifrunner.gnm1.ann1.MV6CSW Arachis hypogaea HOM05D008272 ORTHO05D010429 7.8e-169 597.0 300 97.7
Lalb_Chr17g0348421 Lupinus albus HOM05D008272 ORTHO05D010429 1.2e-148 530.0 298 86.2
VMungo0647G0594 Vigna mungo HOM05D008272 ORTHO05D010429 1.6e-142 509.6 298 82.6
CiPaw.12G129300 Carya illinoinensis HOM05D008272 ORTHO05D010429 1.2e-137 493.4 298 77.5
Potri.011G138900 Populus trichocarpa HOM05D008272 ORTHO05D010429 6.0e-137 491.1 298 75.5
QL08p010511 Quercus lobata HOM05D008272 ORTHO05D010429 3.0e-136 488.8 298 76.2
Cpa.g.sc97.8 Carica papaya HOM05D008272 ORTHO05D010429 1.5e-135 486.5 299 75.9
Duzib170G0415 Durio zibethinus HOM05D008272 ORTHO05D010429 4.3e-135 485.0 299 74.6
Manes.15G072400 Manihot esculenta HOM05D008272 ORTHO05D010429 5.6e-135 484.6 298 76.5
Eucgr.F03464 Eucalyptus grandis HOM05D008272 ORTHO05D010429 1.2e-132 476.9 299 75.6
ClCG10G005430 Citrullus lanatus HOM05D008272 ORTHO05D010429 5.8e-132 474.6 300 76.0
Thecc.07G038600 Theobroma cacao HOM05D008272 ORTHO05D010429 7.6e-132 474.2 299 73.9
CiPaw.11G188800 Carya illinoinensis HOM05D008272 ORTHO05D010429 9.9e-132 473.8 297 74.7
Ciclev10008983m.g Citrus clementina HOM05D008272 ORTHO05D010429 6.4e-131 471.1 300 71.3
Gohir.D01G066300 Gossypium hirsutum HOM05D008272 ORTHO05D010429 5.4e-130 468.0 304 70.4
GSVIVG01037640001 Vitis vinifera HOM05D008272 ORTHO05D010429 5.4e-130 468.0 317 71.3
MELO3C025383.2 Cucumis melo HOM05D008272 ORTHO05D010429 1.2e-129 466.8 297 74.1
CsaV3_3G005170 Cucumis sativus L. HOM05D008272 ORTHO05D010429 1.3e-128 463.4 297 73.7
Gohir.A01G079200 Gossypium hirsutum HOM05D008272 ORTHO05D010429 5.1e-128 461.5 304 70.7
RcHm_v2.0_Chr5g0039361 Rosa chinensis HOM05D008272 ORTHO05D010429 9.6e-127 457.2 299 72.6
Eucgr.F00768 Eucalyptus grandis HOM05D008272 ORTHO05D010429 1.3e-126 456.8 298 72.8
Hund23252 Selenicereus undatus HOM05D008272 ORTHO05D010429 1.8e-125 453.0 343 65.0
Cc05_g13720 Coffea canephora HOM05D008272 ORTHO05D010429 1.9e-122 443.0 299 69.6
Hund01995 Selenicereus undatus HOM05D008272 ORTHO05D010429 1.1e-119 433.7 265 75.1
Gorai.002G088200 Gossypium raimondii HOM05D008272 ORTHO05D010429 6.2e-118 427.9 304 65.8
Migut.M01769 Erythranthe guttata HOM05D008272 ORTHO05D010429 1.4e-117 426.8 246 80.5
Lj1A872T54 Lonicera japonica HOM05D008272 ORTHO05D010429 6.9e-117 424.5 306 67.3
Haze_09670 Corylus avellana HOM05D008272 ORTHO05D010429 2.0e-116 422.9 298 66.8
Hund14975 Selenicereus undatus HOM05D008272 ORTHO05D010429 5.8e-116 421.4 346 59.8
Hma1.2p1_1162F.1_g262620 Hydrangea macrophylla HOM05D008272 ORTHO05D010429 4.6e-113 411.8 239 79.1
HPP92_011139 Vanilla planifolia HOM05D008272 ORTHO05D010429 2.5e-111 406.0 303 62.7
PGR083G1743 Punica granatum HOM05D008272 ORTHO05D010429 4.3e-111 405.2 296 63.9
EL10Ac4g07813 Beta vulgaris HOM05D008272 ORTHO05D010429 3.7e-110 402.1 288 64.9
FAN24G3338 Fragaria x ananassa HOM05D008272 ORTHO05D010429 6.3e-110 401.4 298 64.8
PGR031G2232 Punica granatum HOM05D008272 ORTHO05D010429 8.2e-110 401.0 301 66.1
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 6.5e-107 391.3 247 72.1
ATR0752G027 Amborella trichopoda HOM05D008272 ORTHO05D010429 1.9e-106 389.8 298 62.8
Duzib213G0361 Durio zibethinus HOM05D008272 ORTHO05D010429 2.1e-105 386.3 249 72.7
VMungo0540G1205 Vigna mungo HOM05D008272 ORTHO05D010429 7.4e-103 377.9 228 79.4
SMO119G0124 Selaginella moellendorffii HOM05D008272 ORTHO05D010429 3.7e-102 375.6 253 67.2
MBI02_g22115_MAGBIO Magnolia biondii HOM05D008272 ORTHO05D010429 1.7e-99 366.7 290 61.7
Os04g0625200 Oryza sativa ssp. japonica HOM05D008272 ORTHO05D010429 7.2e-98 361.3 214 77.6
COL.COLO4_09657 Corchorus olitorius HOM05D008272 ORTHO05D010429 2.0e-92 343.2 190 82.1
Thecc.07G038700 Theobroma cacao HOM05D008272 ORTHO05D010429 2.6e-92 342.8 191 81.7
Nn004s41404 Nelumbo nucifera HOM05D008272 ORTHO05D010429 1.4e-90 337.0 226 72.6
FvH4_2g04690 Fragaria vesca HOM05D008272 ORTHO05D010429 3.5e-76 289.3 298 52.0
Sc16g0006090 Simmondsia chinensis HOM05D008272 ORTHO05D010429 5.9e-76 288.5 246 61.4
MBI16_g12297_MAGBIO Magnolia biondii HOM05D008272 ORTHO05D010429 3.0e-72 276.2 190 70.5
Sc03g0008620 Simmondsia chinensis HOM05D008272 ORTHO05D010429 4.0e-72 275.8 190 67.9
CAN.G337.128 Capsicum annuum HOM05D008272 ORTHO05D010429 3.4e-71 272.7 288 51.0
Sabra11G0124700 Salix brachista HOM05D008272 ORTHO05D010429 1.8e-61 240.4 148 73.0
MD11G1219100 Malus domestica HOM05D008272 ORTHO05D010429 2.8e-57 226.5 298 44.0
Sabra11G0124400 Salix brachista HOM05D008272 ORTHO05D010429 3.7e-54 216.1 141 70.9
unitig_578.g15997 Utricularia gibba HOM05D008272 ORTHO05D010429 1.2e-49 201.1 120 76.7
Phvul.L001633 Phaseolus vulgaris HOM05D008272 ORTHO05D010429 3.1e-48 196.4 116 79.3
Oeu020117.1 Olea europaea HOM05D008272 ORTHO05D010429 6.0e-28 129.0 114 57.0
Cfa020968 Carpinus fangiana HOM05D008272 ORTHO05D010429 2.0e-23 114.0 62 79.0
arahy.Tifrunner.gnm1.ann1.39PYJI Arachis hypogaea HOM05D008272 ORTHO05D010429 2.2e-22 110.5 109 57.8
MD03G1201900 Malus domestica HOM05D008272 ORTHO05D010429 1.3e-17 94.7 58 74.1
ATR0579G167 Amborella trichopoda HOM05D006248 ORTHO05D007896 6.9e-16 89.0 198 31.3
MSTRG.10698 Avicennia marina HOM05D006248 ORTHO05D007896 1.2e-15 88.2 162 34.0
HanXRQChr15g0490751 Helianthus annuus HOM05D006248 ORTHO05D007896 1.2e-15 88.2 184 33.7
Mapoly0168s0025 Marchantia polymorpha HOM05D006248 ORTHO05D007896 1.2e-15 88.2 197 30.5
Gorai.010G113400 Gossypium raimondii HOM05D006248 ORTHO05D007896 2.0e-15 87.4 142 35.9
Lsat_1_v5_gn_2_85220 Lactuca sativa HOM05D006248 ORTHO05D007896 2.0e-15 87.4 192 33.9
PRCOL_00003374 Prasinoderma coloniale HOM05D008272 ORTHO05D010429 2.6e-15 87.0 147 32.7
Lsat_1_v5_gn_4_165100 Lactuca sativa HOM05D006248 ORTHO05D007896 3.4e-15 86.7 195 34.4
Dinv41376 Davidia involucrata HOM05D000122 ORTHO05D000139 4.5e-15 86.3 191 32.5
Gohir.D06G098450 Gossypium hirsutum HOM05D006248 ORTHO05D007896 4.5e-15 86.3 142 35.9
Gohir.A06G097800 Gossypium hirsutum HOM05D006248 ORTHO05D007896 5.8e-15 85.9 142 35.2
PRCOL_00000503 Prasinoderma coloniale HOM05D006248 ORTHO05D007896 5.8e-15 85.9 139 34.5
SGA_v2.0_scaffold347G49562 Striga asiatica HOM05D006248 ORTHO05D007896 5.8e-15 85.9 162 34.6
Manes.14G143900 Manihot esculenta HOM05D006248 ORTHO05D007896 9.9e-15 85.1 138 34.8
PGR102G2393 Punica granatum HOM05D006248 ORTHO05D007896 9.9e-15 85.1 163 31.3
AUR62015459 Chenopodium quinoa HOM05D006248 ORTHO05D007896 1.7e-14 84.3 176 31.8
HanXRQChr14g0448981 Helianthus annuus HOM05D006248 ORTHO05D007896 1.7e-14 84.3 216 29.2
PRCOL_00006194 Prasinoderma coloniale HOM05D006248 ORTHO05D010429 1.7e-14 84.3 150 32.0
SMO367G0591 Selaginella moellendorffii HOM05D006248 ORTHO05D007896 1.7e-14 84.3 145 33.8
CDE11G0689 Ceratophyllum demersum HOM05D006248 ORTHO05D007896 2.2e-14 84.0 177 31.1
ECA238G3803 Erigeron canadensis HOM05D006248 ORTHO05D007896 2.2e-14 84.0 208 29.3
Nitab4.5_0006523g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 2.9e-14 83.6 186 31.7
arahy.Tifrunner.gnm1.ann1.73F3S2 Arachis hypogaea HOM05D006248 ORTHO05D007896 3.8e-14 83.2 198 30.3
Thhalv10025500m.g Eutrema salsugineum HOM05D006248 ORTHO05D007896 3.8e-14 83.2 139 36.0
arahy.Tifrunner.gnm1.ann1.35XGVT Arachis hypogaea HOM05D006248 ORTHO05D007896 4.9e-14 82.8 198 30.3
arahy.Tifrunner.gnm1.ann1.VIT8JQ Arachis hypogaea HOM05D006248 ORTHO05D007896 4.9e-14 82.8 145 34.5
Aa31LG2G19940 Aethionema arabicum HOM05D006248 ORTHO05D007896 6.4e-14 82.4 138 34.1
BcaNung04566 Brassica carinata HOM05D006248 ORTHO05D007896 6.4e-14 82.4 191 29.8
Migut.K00321 Erythranthe guttata HOM05D006248 ORTHO05D007896 6.4e-14 82.4 224 29.0
FAN23G2094 Fragaria x ananassa HOM05D000238 ORTHO05D001043 8.4e-14 82.0 157 33.1
Prupe.7G263300 Prunus persica HOM05D006248 ORTHO05D007896 8.4e-14 82.0 136 35.3
Hund24368 Selenicereus undatus HOM05D006248 ORTHO05D007896 8.4e-14 82.0 184 31.5
Actinidia38318 Actinidia chinensis HOM05D006248 ORTHO05D007896 1.1e-13 81.6 197 30.5
EL10Ac3g05888 Beta vulgaris HOM05D006248 ORTHO05D007896 1.1e-13 81.6 184 31.5
A03p60090 Brassica napus HOM05D006248 ORTHO05D007896 1.1e-13 81.6 134 33.6
BraA03t15055Z Brassica rapa HOM05D006248 ORTHO05D007896 1.1e-13 81.6 134 33.6
Ciclev10008803m.g Citrus clementina HOM05D006248 ORTHO05D007896 1.1e-13 81.6 191 28.8
BcaNung00567 Brassica carinata HOM05D006248 ORTHO05D007896 1.4e-13 81.3 134 33.6
C07p58030 Brassica napus HOM05D002357 ORTHO05D007896 1.4e-13 81.3 134 33.6
BolC7t46261H Brassica oleracea HOM05D006248 ORTHO05D007896 1.4e-13 81.3 134 33.6
MELO3C008959.2 Cucumis melo HOM05D006248 ORTHO05D007896 1.4e-13 81.3 131 34.4
CsaV3_4G030910 Cucumis sativus L. HOM05D006248 ORTHO05D007896 1.4e-13 81.3 131 34.4
Lalb_Chr08g0234181 Lupinus albus HOM05D006248 ORTHO05D007896 1.4e-13 81.3 138 34.8
Sp7g28450 Schrenkiella parvula HOM05D006248 ORTHO05D007896 1.4e-13 81.3 190 30.5
CSS0008954 Camellia sinensis var. sinensis HOM05D006248 ORTHO05D007896 1.9e-13 80.9 124 35.5
PGSC0003DMG402011138 Solanum tuberosum HOM05D006248 ORTHO05D007896 1.9e-13 80.9 212 30.2
TPR.G3534 Trifolium pratense HOM05D006248 ORTHO05D007896 1.9e-13 80.9 250 28.0
CANSAT80G0015 Cannabis sativa HOM05D006248 ORTHO05D007896 2.4e-13 80.5 131 35.1
CANSAT80G1584 Cannabis sativa HOM05D006248 ORTHO05D007896 2.4e-13 80.5 131 35.1
ClCG02G020550 Citrullus lanatus HOM05D006248 ORTHO05D007896 2.4e-13 80.5 131 34.4
CsaV3_2G008470 Cucumis sativus L. HOM05D006248 ORTHO05D007896 2.4e-13 80.5 131 34.4
Duzib168G1034 Durio zibethinus HOM05D006248 ORTHO05D007896 2.4e-13 80.5 131 34.4
Gohir.D05G054900 Gossypium hirsutum HOM05D006248 ORTHO05D007896 2.4e-13 80.5 126 34.9
Lj6g0025769 Lotus japonicus HOM05D006248 ORTHO05D007896 2.4e-13 80.5 210 29.5
Oeu054273.3 Olea europaea HOM05D006248 ORTHO05D007896 2.4e-13 80.5 119 36.1
PSO384G3884 Papaver somniferum HOM05D006248 ORTHO05D007896 2.4e-13 80.5 202 30.2
Sed0021098 Sechium edule HOM05D006248 ORTHO05D007896 2.4e-13 80.5 131 34.4
Cpa.g.sc46.160 Carica papaya HOM05D006248 ORTHO05D007896 3.2e-13 80.1 116 37.9
CiPaw.15G168100 Carya illinoinensis HOM05D006248 ORTHO05D007896 3.2e-13 80.1 184 31.5
Eucgr.C02495 Eucalyptus grandis HOM05D006248 ORTHO05D007896 3.2e-13 80.1 194 30.4
Gohir.A05G053300 Gossypium hirsutum HOM05D006248 ORTHO05D007896 3.2e-13 80.1 126 34.1
Gorai.009G056600 Gossypium raimondii HOM05D006248 ORTHO05D007896 3.2e-13 80.1 126 34.1
Peaxi162Scf00401g00615 Petunia axillaris HOM05D006248 ORTHO05D007896 3.2e-13 80.1 203 29.1
RcHm_v2.0_Chr2g0085591 Rosa chinensis HOM05D006248 ORTHO05D007896 3.2e-13 80.1 157 32.5
SalBow1G5186 Salvia bowleyana HOM05D006248 ORTHO05D007896 3.2e-13 80.1 128 33.6
Sc06g0007960 Simmondsia chinensis HOM05D006248 ORTHO05D007896 3.2e-13 80.1 144 34.7
Ca_03171_v3 Cicer arietinum L. HOM05D006248 ORTHO05D007896 4.2e-13 79.7 145 33.1
FAN26G2974 Fragaria x ananassa HOM05D000238 ORTHO05D007896 4.2e-13 79.7 157 32.5
QL02p093323 Quercus lobata HOM05D006248 ORTHO05D007896 4.2e-13 79.7 189 30.2
Rhsim01G0033000 Rhododendron simsii HOM05D006248 ORTHO05D007896 4.2e-13 79.7 129 33.3
Nitab4.5_0005147g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 5.4e-13 79.3 205 30.7
Thecc.09G029500 Theobroma cacao HOM05D006248 ORTHO05D007896 5.4e-13 79.3 186 31.2
CBR_g21007 Chara braunii HOM05D006248 ORTHO05D007896 7.1e-13 79.0 176 28.4
Cc06_g14900 Coffea canephora HOM05D006248 ORTHO05D007896 7.1e-13 79.0 213 29.6
FvH4_1g00880 Fragaria vesca HOM05D006248 ORTHO05D007896 7.1e-13 79.0 157 32.5
Glyma.12G163500 Glycine max HOM05D006248 ORTHO05D007896 7.1e-13 79.0 196 30.1
Sed0009955 Sechium edule HOM05D006248 ORTHO05D007896 7.1e-13 79.0 191 28.3
AL7G21560 Arabidopsis lyrata HOM05D006248 ORTHO05D007896 9.3e-13 78.6 197 31.5
Carub.0007s0999 Capsella rubella HOM05D006248 ORTHO05D007896 9.3e-13 78.6 193 30.6
CAN.G160.64 Capsicum annuum HOM05D006248 ORTHO05D007896 9.3e-13 78.6 121 36.4
CARHR238450 Cardamine hirsuta HOM05D006248 ORTHO05D007896 9.3e-13 78.6 195 30.3
Haze_19202 Corylus avellana HOM05D006248 ORTHO05D007896 9.3e-13 78.6 191 29.3
DCAR_019396 Daucus carota HOM05D006248 ORTHO05D007896 9.3e-13 78.6 216 28.2
MD15G1144400 Malus domestica HOM05D006248 ORTHO05D007896 9.3e-13 78.6 136 35.3
TWI09G0649 Tripterygium wilfordii HOM05D006248 ORTHO05D007896 9.3e-13 78.6 184 29.9
vmacro16799 Vaccinium macrocarpon HOM05D006248 ORTHO05D007896 9.3e-13 78.6 129 33.3
GSVIVG01023612001 Vitis vinifera HOM05D006248 ORTHO05D007896 9.3e-13 78.6 183 28.4
Cfa020823 Carpinus fangiana HOM05D006248 ORTHO05D007896 1.2e-12 78.2 184 30.4
Solyc07g005580.4 Solanum lycopersicum HOM05D006248 ORTHO05D007896 1.2e-12 78.2 203 29.6
Sopen07g001690 Solanum pennellii HOM05D006248 ORTHO05D007896 1.2e-12 78.2 203 29.6
AT4G30580 Arabidopsis thaliana HOM05D006248 ORTHO05D007896 1.6e-12 77.8 197 31.0
PSO339G1376 Papaver somniferum HOM05D006248 ORTHO05D007896 2.7e-12 77.0 202 29.7
Phvul.007G037000 Phaseolus vulgaris HOM05D006248 ORTHO05D007896 2.7e-12 77.0 147 32.0
Psat1g022520 Pisum sativum HOM05D006248 ORTHO05D007896 2.7e-12 77.0 123 34.1
Atru.chr7.37 Acer truncatum HOM05D006248 ORTHO05D007896 3.5e-12 76.6 184 29.9
unitig_746.g26565 Utricularia gibba HOM05D006248 ORTHO05D007896 3.5e-12 76.6 121 34.7
Medtr5g043620 Medicago truncatula HOM05D006248 ORTHO05D007896 4.6e-12 76.3 130 33.8
Nn7g36251 Nelumbo nucifera HOM05D006248 ORTHO05D007896 4.6e-12 76.3 116 36.2
Aqoxy2G03376 Aquilegia oxysepala HOM05D006248 ORTHO05D007896 6.0e-12 75.9 191 31.4
CiPaw.16G110600 Carya illinoinensis HOM05D006248 ORTHO05D007896 6.0e-12 75.9 116 35.3
Glyma.06G220300 Glycine max HOM05D006248 ORTHO05D007896 6.0e-12 75.9 193 29.5
HPP92_007369 Vanilla planifolia HOM05D006248 ORTHO05D007896 6.0e-12 75.9 214 29.0
Pp3c2_20500 Physcomitrium patens HOM05D006248 ORTHO05D007896 1.0e-11 75.1 229 24.9
THA.LOC104803540 Tarenaya hassleriana HOM05D006248 ORTHO05D007896 1.0e-11 75.1 190 29.5
Duzib187G1891 Durio zibethinus HOM05D006248 ORTHO05D007896 1.3e-11 74.7 184 29.3
Lj7A459G62 Lonicera japonica HOM05D006248 ORTHO05D007896 1.3e-11 74.7 215 28.8
MBI04_g39114_MAGBIO Magnolia biondii HOM05D006248 ORTHO05D007896 1.3e-11 74.7 204 29.4
MCO11G046 Micromonas commoda HOM05D006248 ORTHO05D007896 1.3e-11 74.7 159 28.3
Os10g0497100 Oryza sativa ssp. japonica HOM05D006248 ORTHO05D007896 1.8e-11 74.3 203 27.6
Potri.006G183700 Populus trichocarpa HOM05D006248 ORTHO05D007896 5.1e-11 72.8 116 33.6
TAR374G0826 Trochodendron aralioides HOM05D006248 ORTHO05D007896 1.5e-10 71.2 116 34.5
SHI18557 Sapria himalayana HOM05D006248 ORTHO05D007896 2.5e-10 70.5 126 31.0
Actinidia27193 Actinidia chinensis HOM05D006248 ORTHO05D007896 9.6e-10 68.6 138 31.9
Zm00001eb220920 Zea mays HOM05D006248 ORTHO05D007896 9.6e-10 68.6 138 29.0
Cre09.g398289 Chlamydomonas reinhardtii HOM05D006248 ORTHO05D007896 1.4e-08 64.7 169 27.8
Hma1.2p1_0222F.1_g093600 Hydrangea macrophylla HOM05D006248 ORTHO05D007896 4.0e-08 63.2 210 26.2
Lsat_1_v5_gn_4_121720 Lactuca sativa HOM05D003844 ORTHO05D004534 7.6e-07 58.9 206 25.2
COL.COLO4_18812 Corchorus olitorius HOM05D006248 ORTHO05D007896 1.7e-06 57.8 67 41.8
SMO270G0098 Selaginella moellendorffii HOM05D003518 ORTHO05D005164 6.4e-06 55.8 142 31.0


User provided reference genes

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