Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.UB8UIZ Arachis hypogaea HOM05D006147 ORTHO05D007501 1.2e-255 885.9 448 100.0
arahy.Tifrunner.gnm1.ann1.JUX7JJ Arachis hypogaea HOM05D006147 ORTHO05D007501 4.9e-34 149.8 187 50.8
arahy.Tifrunner.gnm1.ann1.S6V2XE Arachis hypogaea HOM05D006147 ORTHO05D007501 4.9e-34 149.8 187 50.8
Lj3g0027328 Lotus japonicus HOM05D006147 ORTHO05D007501 5.4e-33 146.4 187 50.8
Glyma.11G110000 Glycine max HOM05D006147 ORTHO05D007501 5.6e-30 136.3 120 61.7
Glyma.12G036900 Glycine max HOM05D006147 ORTHO05D007501 5.6e-30 136.3 120 60.8
Ca_20936_v3 Cicer arietinum L. HOM05D006147 ORTHO05D007501 1.6e-29 134.8 181 48.6
Psat7g138880 Pisum sativum HOM05D006147 ORTHO05D007501 2.1e-29 134.4 181 48.6
Phvul.011G038600 Phaseolus vulgaris HOM05D006147 ORTHO05D007501 4.7e-29 133.3 120 60.8
VMungo1127G0575 Vigna mungo HOM05D006147 ORTHO05D007501 8.1e-29 132.5 120 59.2
ECA233G5423 Erigeron canadensis HOM05D006147 ORTHO05D001140 6.8e-28 129.4 112 62.5
TPR.G28159 Trifolium pratense HOM05D006147 ORTHO05D007501 1.2e-27 128.6 187 44.4
FvH4_2g10480 Fragaria vesca HOM05D006147 ORTHO05D007501 1.5e-27 128.3 143 52.4
Lalb_Chr03g0025341 Lupinus albus HOM05D006147 ORTHO05D007501 1.7e-26 124.8 187 42.2
MD10G1062800 Malus domestica HOM05D006147 ORTHO05D007501 1.7e-26 124.8 114 60.5
MD05G1055500 Malus domestica HOM05D006147 ORTHO05D007501 3.8e-26 123.6 114 59.6
FAN27G3378 Fragaria x ananassa HOM05D006147 ORTHO05D007501 4.9e-26 123.2 114 59.6
RcHm_v2.0_Chr6g0267981 Rosa chinensis HOM05D006147 ORTHO05D007501 6.4e-26 122.9 114 58.8
Thecc.02G074800 Theobroma cacao HOM05D006147 ORTHO05D007501 6.4e-26 122.9 187 43.3
TWI31G1450 Tripterygium wilfordii HOM05D006147 ORTHO05D007501 6.4e-26 122.9 114 59.6
Medtr4g072040 Medicago truncatula HOM05D006147 ORTHO05D007501 1.4e-25 121.7 181 44.8
arahy.Tifrunner.gnm1.ann1.B04QBU Arachis hypogaea HOM05D006147 ORTHO05D007501 3.2e-25 120.6 195 43.1
Prupe.8G083600 Prunus persica HOM05D006147 ORTHO05D007501 3.2e-25 120.6 114 58.8
SalBow3G3875 Salvia bowleyana HOM05D006147 ORTHO05D007501 3.2e-25 120.6 110 57.3
CiPaw.05G073500 Carya illinoinensis HOM05D006147 ORTHO05D007501 5.4e-25 119.8 181 45.3
Solyc09g091970.4 Solanum lycopersicum HOM05D006147 ORTHO05D007501 1.2e-24 118.6 107 58.9
PGSC0003DMG402031287 Solanum tuberosum HOM05D006147 ORTHO05D007501 1.2e-24 118.6 107 58.9
Nitab4.5_0001154g0060 Nicotiana tabacum HOM05D006147 ORTHO05D007501 1.6e-24 118.2 110 57.3
Sed0012779 Sechium edule HOM05D006147 ORTHO05D007501 1.6e-24 118.2 181 45.3
Sopen09g034870 Solanum pennellii HOM05D006147 ORTHO05D007501 1.6e-24 118.2 107 57.9
Peaxi162Scf00684g00123 Petunia axillaris HOM05D006147 ORTHO05D007501 2.1e-24 117.9 107 58.9
QL11p046465 Quercus lobata HOM05D006147 ORTHO05D007501 2.7e-24 117.5 181 44.2
Atru.chr5.3146 Acer truncatum HOM05D006147 ORTHO05D007501 4.6e-24 116.7 114 58.8
Cfa005114 Carpinus fangiana HOM05D006147 ORTHO05D007501 6.0e-24 116.3 181 42.5
arahy.Tifrunner.gnm1.ann1.I0NQT8 Arachis hypogaea HOM05D017492 ORTHO05D084729 7.8e-24 115.9 91 65.9
CANSAT11G2690 Cannabis sativa HOM05D006147 ORTHO05D007501 7.8e-24 115.9 177 42.9
CAN.G1635.6 Capsicum annuum HOM05D006147 ORTHO05D007501 1.0e-23 115.5 110 56.4
Manes.04G083100 Manihot esculenta HOM05D006147 ORTHO05D007501 1.0e-23 115.5 181 43.1
COL.COLO4_26048 Corchorus olitorius HOM05D006147 ORTHO05D007501 1.3e-23 115.2 114 56.1
Ciclev10028728m.g Citrus clementina HOM05D006147 ORTHO05D007501 1.7e-23 114.8 183 42.1
Cc02_g16890 Coffea canephora HOM05D006147 ORTHO05D007501 1.7e-23 114.8 102 58.8
THA.LOC104804110 Tarenaya hassleriana HOM05D006147 ORTHO05D007501 1.7e-23 114.8 114 53.5
Potri.009G124800 Populus trichocarpa HOM05D006147 ORTHO05D007501 2.3e-23 114.4 114 55.3
Dinv41999 Davidia involucrata HOM05D006147 ORTHO05D007501 3.0e-23 114.0 114 56.1
Migut.N01278 Erythranthe guttata HOM05D006147 ORTHO05D007501 3.0e-23 114.0 110 54.5
CDE02G0092 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 3.9e-23 113.6 154 45.5
CsaV3_7G000410 Cucumis sativus L. HOM05D006147 ORTHO05D007501 3.9e-23 113.6 181 43.6
CSS0016386 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 5.1e-23 113.2 170 43.5
Duzib248G0035 Durio zibethinus HOM05D006147 ORTHO05D007501 5.1e-23 113.2 114 55.3
Gohir.A03G199400 Gossypium hirsutum HOM05D006147 ORTHO05D007501 5.1e-23 113.2 181 42.5
Actinidia02248 Actinidia chinensis HOM05D006147 ORTHO05D007501 6.6e-23 112.8 181 42.5
AL4G10420 Arabidopsis lyrata HOM05D006147 ORTHO05D007501 6.6e-23 112.8 102 58.8
A04p16060 Brassica napus HOM05D006147 ORTHO05D007501 6.6e-23 112.8 114 55.3
AUR62040654 Chenopodium quinoa HOM05D006147 ORTHO05D007501 6.6e-23 112.8 129 51.2
Gohir.D02G220700 Gossypium hirsutum HOM05D006147 ORTHO05D007501 6.6e-23 112.8 181 42.5
Gorai.005G248600 Gossypium raimondii HOM05D006147 ORTHO05D007501 6.6e-23 112.8 181 42.5
Sabra09G0095800 Salix brachista HOM05D006147 ORTHO05D007501 6.6e-23 112.8 172 43.0
AT2G21280 Arabidopsis thaliana HOM05D006147 ORTHO05D007501 8.7e-23 112.5 120 52.5
C04p50520 Brassica napus HOM05D006147 ORTHO05D007501 8.7e-23 112.5 114 55.3
PGR042G0282 Punica granatum HOM05D006147 ORTHO05D007501 1.1e-22 112.1 114 54.4
Aqoxy6G02357 Aquilegia oxysepala HOM05D006147 ORTHO05D007501 1.5e-22 111.7 181 42.0
CSS0033675 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 1.5e-22 111.7 170 42.9
Carub.0004s0032 Capsella rubella HOM05D006147 ORTHO05D007501 1.5e-22 111.7 102 57.8
MELO3C002785.2 Cucumis melo HOM05D006147 ORTHO05D007501 1.5e-22 111.7 181 43.1
DCAR_003686 Daucus carota HOM05D006147 ORTHO05D007501 1.5e-22 111.7 102 59.8
Sp4g00470 Schrenkiella parvula HOM05D006147 ORTHO05D007501 2.5e-22 110.9 102 56.9
TAR628G0064 Trochodendron aralioides HOM05D006147 ORTHO05D007501 2.5e-22 110.9 183 41.0
Nn6g32256 Nelumbo nucifera HOM05D006147 ORTHO05D007501 3.3e-22 110.5 114 53.5
PSO210G6769 Papaver somniferum HOM05D006147 ORTHO05D007501 3.3e-22 110.5 181 41.4
Cpa.g.sc150.15 Carica papaya HOM05D006147 ORTHO05D007501 4.3e-22 110.2 181 43.1
Thhalv10000221m.g Eutrema salsugineum HOM05D006147 ORTHO05D007501 4.3e-22 110.2 102 57.8
Aa31LG7G15210 Aethionema arabicum HOM05D006147 ORTHO05D007501 7.3e-22 109.4 102 55.9
Oeu055635.1 Olea europaea HOM05D006147 ORTHO05D007501 1.3e-21 108.6 102 55.9
PSO170G3006 Papaver somniferum HOM05D006147 ORTHO05D007501 1.6e-21 108.2 114 52.6
Hund00177 Selenicereus undatus HOM05D006147 ORTHO05D007501 1.6e-21 108.2 114 54.4
CARHR112150 Cardamine hirsuta HOM05D006147 ORTHO05D007501 2.1e-21 107.8 102 56.9
EL10Ac9g21633 Beta vulgaris HOM05D006147 ORTHO05D007501 2.8e-21 107.5 181 40.3
Hund00185 Selenicereus undatus HOM05D006147 ORTHO05D007501 2.8e-21 107.5 114 54.4
BcaC02g08802 Brassica carinata HOM05D006147 ORTHO05D007501 4.8e-21 106.7 114 52.6
BolC4t26650H Brassica oleracea HOM05D006147 ORTHO05D007501 4.8e-21 106.7 114 52.6
Sc18g0005390 Simmondsia chinensis HOM05D006147 ORTHO05D007501 6.2e-21 106.3 181 41.4
AUR62016834 Chenopodium quinoa HOM05D006147 ORTHO05D007501 1.1e-20 105.5 170 41.8
Eucgr.G01732 Eucalyptus grandis HOM05D006147 ORTHO05D007501 1.1e-20 105.5 114 52.6
FAN15G0109 Fragaria x ananassa HOM05D006147 ORTHO05D007501 1.1e-20 105.5 117 53.8
AUR62010384 Chenopodium quinoa HOM05D006147 ORTHO05D007501 5.3e-20 103.2 103 55.3
GSVIVG01024169001 Vitis vinifera HOM05D006147 ORTHO05D007501 9.0e-20 102.4 119 47.1
ATR0149G025 Amborella trichopoda HOM05D006147 ORTHO05D007501 2.0e-19 101.3 110 50.0
Pp3c7_11090 Physcomitrium patens HOM05D006147 ORTHO05D007501 3.4e-19 100.5 100 50.0
Pp3c7_11100 Physcomitrium patens HOM05D006147 ORTHO05D007501 3.4e-19 100.5 100 50.0
arahy.Tifrunner.gnm1.ann1.63XKYH Arachis hypogaea HOM05D006147 ORTHO05D007501 5.8e-19 99.8 63 79.4
Os02g0834700 Oryza sativa ssp. japonica HOM05D006147 ORTHO05D007501 7.6e-19 99.4 112 51.8
HPP92_002502 Vanilla planifolia HOM05D006147 ORTHO05D007501 1.7e-18 98.2 103 53.4
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 2.2e-18 97.8 87 55.2
Rhsim05G0068100 Rhododendron simsii HOM05D006147 ORTHO05D007501 2.9e-18 97.4 181 38.7
vmacro17420 Vaccinium macrocarpon HOM05D006147 ORTHO05D007501 1.4e-17 95.1 134 46.3
Mapoly0021s0030 Marchantia polymorpha HOM05D006147 ORTHO05D007501 5.4e-17 93.2 102 47.1
Zm00001eb259680 Zea mays HOM05D006147 ORTHO05D007501 1.2e-16 92.0 113 47.8
Nitab4.5_0001370g0020 Nicotiana tabacum HOM05D006147 ORTHO05D007501 2.1e-16 91.3 63 69.8
Haze_02237 Corylus avellana HOM05D006147 ORTHO05D007501 4.6e-16 90.1 206 34.5
SMO146G0042 Selaginella moellendorffii HOM05D006147 ORTHO05D007501 1.3e-15 88.6 102 44.1
arahy.Tifrunner.gnm1.ann1.CCWV51 Arachis hypogaea HOM05D017492 ORTHO05D087247 3.9e-15 87.0 80 62.5
unitig_899.g15602 Utricularia gibba HOM05D006147 ORTHO05D007501 5.1e-15 86.7 108 40.7
arahy.Tifrunner.gnm1.ann1.IQMF78 Arachis hypogaea HOM05D017492 ORTHO05D084130 1.5e-14 85.1 68 69.1
arahy.Tifrunner.gnm1.ann1.FL5MRT Arachis hypogaea HOM05D017492 ORTHO05D005320 7.3e-14 82.8 60 75.0
arahy.Tifrunner.gnm1.ann1.J7WFLE Arachis hypogaea HOM05D017492 ORTHO05D086331 7.3e-14 82.8 60 75.0
MELO3C028749.2 Cucumis melo HOM05D006147 ORTHO05D007501 1.3e-13 82.0 98 49.0
arahy.Tifrunner.gnm1.ann1.M3MXAB Arachis hypogaea HOM05D017492 ORTHO05D083372 1.6e-13 81.6 60 73.3
SEGI_01868 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 3.1e-12 77.4 63 58.7
Cre05.g233305 Chlamydomonas reinhardtii HOM05D006147 ORTHO05D007501 6.9e-12 76.3 100 40.0
Lsat_1_v5_gn_8_127980 Lactuca sativa HOM05D006147 ORTHO05D007501 2.9e-10 70.9 89 49.4
MCO05G212 Micromonas commoda HOM05D006147 ORTHO05D007501 6.4e-10 69.7 97 39.2
arahy.Tifrunner.gnm1.ann1.7T6EZL Arachis hypogaea HOM05D006827 ORTHO05D008725 8.4e-10 69.3 96 54.2
arahy.Tifrunner.gnm1.ann1.GV6LK0 Arachis hypogaea HOM05D006827 ORTHO05D008725 8.4e-10 69.3 36 97.2
arahy.Tifrunner.gnm1.ann1.W8AIPN Arachis hypogaea HOM05D006827 ORTHO05D008725 1.4e-09 68.6 38 92.1
arahy.Tifrunner.gnm1.ann1.U5A9T5 Arachis hypogaea HOM05D000321 ORTHO05D000204 3.0e-07 60.8 160 34.4
BcaB08g34979 Brassica carinata HOM05D006147 ORTHO05D007501 5.1e-07 60.1 99 37.4
ClCG02G004540 Citrullus lanatus HOM05D006147 ORTHO05D007501 8.7e-07 59.3 166 31.3
Glyma.15G137900 Glycine max HOM05D006827 ORTHO05D008725 1.5e-06 58.5 39 69.2
arahy.Tifrunner.gnm1.ann1.PBTS15 Arachis hypogaea HOM05D006147 ORTHO05D007501 2.5e-06 57.8 138 36.2
Glyma.09G032900 Glycine max HOM05D001281 ORTHO05D008725 2.5e-06 57.8 39 66.7
PRCOL_00000238 Prasinoderma coloniale HOM05D006147 ORTHO05D007501 2.5e-06 57.8 78 46.2
Phvul.006G120200 Phaseolus vulgaris HOM05D006827 ORTHO05D008725 9.6e-06 55.8 39 64.1


User provided reference genes

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