Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.UB6WN3 Arachis hypogaea HOM05D007782 ORTHO05D009833 3.3e-33 144.4 71 100.0
arahy.Tifrunner.gnm1.ann1.WVD97E Arachis hypogaea HOM05D007782 ORTHO05D009833 9.5e-33 142.9 71 98.6
Lalb_Chr09g0332651 Lupinus albus HOM05D007782 ORTHO05D009833 9.2e-20 99.8 66 69.7
Phvul.002G295900 Phaseolus vulgaris HOM05D007782 ORTHO05D009833 1.7e-18 95.5 64 70.3
Prupe.5G114300 Prunus persica HOM05D007782 ORTHO05D009833 1.7e-18 95.5 71 69.0
Ca_17498_v3 Cicer arietinum L. HOM05D007782 ORTHO05D009833 3.9e-18 94.4 64 70.3
Glyma.08G021000 Glycine max HOM05D007782 ORTHO05D009833 1.9e-17 92.0 60 73.3
Lj4g0009467 Lotus japonicus HOM05D007782 ORTHO05D009833 4.3e-17 90.9 56 75.0
Psat7g027800 Pisum sativum HOM05D007782 ORTHO05D009833 7.3e-17 90.1 65 69.2
Lalb_Chr05g0224281 Lupinus albus HOM05D007782 ORTHO05D009833 9.5e-17 89.7 62 69.4
Thecc.03G292200 Theobroma cacao HOM05D007782 ORTHO05D009833 1.2e-16 89.4 62 71.0
MD06G1100800 Malus domestica HOM05D007782 ORTHO05D009833 2.1e-16 88.6 66 63.6
Haze_08681 Corylus avellana HOM05D007782 ORTHO05D009833 3.6e-16 87.8 71 60.6
FAN04G1669 Fragaria x ananassa HOM05D007782 ORTHO05D009833 6.2e-16 87.0 71 60.6
RcHm_v2.0_Chr7g0195561 Rosa chinensis HOM05D007782 ORTHO05D009833 1.1e-15 86.3 71 59.2
TPR.G3446 Trifolium pratense HOM05D007782 ORTHO05D009833 1.4e-15 85.9 65 67.7
Cfa012852 Carpinus fangiana HOM05D007782 ORTHO05D009833 1.8e-15 85.5 71 59.2
ClCG01G002060 Citrullus lanatus HOM05D007782 ORTHO05D009833 2.3e-15 85.1 60 70.0
CsaV3_5G002190 Cucumis sativus L. HOM05D007782 ORTHO05D009833 3.1e-15 84.7 60 68.3
Sed0001446 Sechium edule HOM05D007782 ORTHO05D009833 3.1e-15 84.7 62 66.1
CiPaw.12G085400 Carya illinoinensis HOM05D007782 ORTHO05D009833 4.0e-15 84.3 71 59.2
Ciclev10023213m.g Citrus clementina HOM05D007782 ORTHO05D009833 4.0e-15 84.3 59 66.1
MELO3C005735.2 Cucumis melo HOM05D007782 ORTHO05D009833 6.8e-15 83.6 60 66.7
FAN08G0568 Fragaria x ananassa HOM05D007782 ORTHO05D009833 8.9e-15 83.2 71 57.7
QL02p031553 Quercus lobata HOM05D007782 ORTHO05D009833 1.5e-14 82.4 72 58.3
Cc08_g15700 Coffea canephora HOM05D007782 ORTHO05D009833 2.0e-14 82.0 60 65.0
GSVIVG01019488001 Vitis vinifera HOM05D007782 ORTHO05D009833 2.0e-14 82.0 60 66.7
Dinv37557 Davidia involucrata HOM05D007782 ORTHO05D009833 2.6e-14 81.6 64 62.5
Manes.01G046100 Manihot esculenta HOM05D007782 ORTHO05D009833 5.8e-14 80.5 60 66.7
THA.LOC104814903 Tarenaya hassleriana HOM05D007782 ORTHO05D009833 7.5e-14 80.1 63 61.9
Aqoxy7G00161 Aquilegia oxysepala HOM05D007782 ORTHO05D009833 9.9e-14 79.7 58 67.2
COL.COLO4_21276 Corchorus olitorius HOM05D007782 ORTHO05D009833 9.9e-14 79.7 60 63.3
Potri.003G136500 Populus trichocarpa HOM05D007782 ORTHO05D009833 9.9e-14 79.7 60 65.0
Sabra03G0098200 Salix brachista HOM05D007782 ORTHO05D009833 9.9e-14 79.7 60 65.0
Hund14240 Selenicereus undatus HOM05D007782 ORTHO05D009833 1.7e-13 79.0 63 60.3
TAR636G2384 Trochodendron aralioides HOM05D007782 ORTHO05D009833 1.7e-13 79.0 57 64.9
AT4G23760 Arabidopsis thaliana HOM05D007782 ORTHO05D009833 2.9e-13 78.2 50 68.0
CARHR231160 Cardamine hirsuta HOM05D007782 ORTHO05D009833 2.9e-13 78.2 56 62.5
Lsat_1_v5_gn_6_11880 Lactuca sativa HOM05D007782 ORTHO05D009833 4.9e-13 77.4 60 65.0
AL7G29590 Arabidopsis lyrata HOM05D007782 ORTHO05D009833 6.4e-13 77.0 49 71.4
Thhalv10026535m.g Eutrema salsugineum HOM05D007782 ORTHO05D009833 6.4e-13 77.0 50 70.0
HanXRQChr07g0191091 Helianthus annuus HOM05D007782 ORTHO05D009833 6.4e-13 77.0 56 69.6
Actinidia27340 Actinidia chinensis HOM05D007782 ORTHO05D009833 1.1e-12 76.3 60 58.3
Aa31LG6G7000 Aethionema arabicum HOM05D007782 ORTHO05D009833 1.9e-12 75.5 50 68.0
SalBow8G2543 Salvia bowleyana HOM05D007782 ORTHO05D009833 1.9e-12 75.5 61 54.1
Carub.0007s1735 Capsella rubella HOM05D007782 ORTHO05D009833 2.4e-12 75.1 50 68.0
Nn1g01795 Nelumbo nucifera HOM05D007782 ORTHO05D009833 2.4e-12 75.1 60 60.0
Sp7g21730 Schrenkiella parvula HOM05D007782 ORTHO05D009833 2.4e-12 75.1 50 68.0
Migut.E01229 Erythranthe guttata HOM05D007782 ORTHO05D009833 3.2e-12 74.7 61 54.1
Sopen12g028600 Solanum pennellii HOM05D007782 ORTHO05D009833 7.1e-12 73.6 47 68.1
CDE10G0746 Ceratophyllum demersum HOM05D007782 ORTHO05D009833 9.2e-12 73.2 64 53.1
unitig_61.g26273 Utricularia gibba HOM05D007782 ORTHO05D009833 9.2e-12 73.2 61 57.4
Glyma.05G214700 Glycine max HOM05D007782 ORTHO05D009833 1.2e-11 72.8 49 67.3
PGSC0003DMG400004987 Solanum tuberosum HOM05D007782 ORTHO05D009833 1.2e-11 72.8 65 58.5
Sp6g06300 Schrenkiella parvula HOM05D007782 ORTHO05D009833 1.6e-11 72.4 53 56.6
Solyc12g056090.2 Solanum lycopersicum HOM05D007782 ORTHO05D009833 1.6e-11 72.4 65 58.5
A03p54750 Brassica napus HOM05D007782 ORTHO05D009833 2.1e-11 72.0 50 64.0
BraA03t14542Z Brassica rapa HOM05D007782 ORTHO05D009833 2.1e-11 72.0 50 64.0
CDE10G0352 Ceratophyllum demersum HOM05D007782 ORTHO05D009833 2.1e-11 72.0 64 53.1
Thhalv10029109m.g Eutrema salsugineum HOM05D007782 ORTHO05D009833 2.1e-11 72.0 46 65.2
Peaxi162Scf00117g01316 Petunia axillaris HOM05D007782 ORTHO05D009833 2.7e-11 71.6 65 52.3
DCAR_027723 Daucus carota HOM05D007782 ORTHO05D009833 3.5e-11 71.2 62 56.5
BcaNung05927 Brassica carinata HOM05D007782 ORTHO05D009833 4.6e-11 70.9 53 58.5
Eucgr.E00835 Eucalyptus grandis HOM05D007782 ORTHO05D009833 4.6e-11 70.9 62 56.5
ATR1093G039 Amborella trichopoda HOM05D007782 ORTHO05D009833 7.8e-11 70.1 60 51.7
CARHR255470 Cardamine hirsuta HOM05D007782 ORTHO05D009833 7.8e-11 70.1 66 54.5
AL6G45280 Arabidopsis lyrata HOM05D007782 ORTHO05D009833 1.0e-10 69.7 53 56.6
Atru.chr9.2057 Acer truncatum HOM05D007782 ORTHO05D009833 1.3e-10 69.3 59 57.6
CAN.G2065.2 Capsicum annuum HOM05D007782 ORTHO05D009833 1.3e-10 69.3 47 63.8
C07p53110 Brassica napus HOM05D007782 ORTHO05D009833 2.3e-10 68.6 50 60.0
BolC7t45807H Brassica oleracea HOM05D007782 ORTHO05D009833 2.3e-10 68.6 50 60.0
MBI06_g22402_MAGBIO Magnolia biondii HOM05D007782 ORTHO05D009833 2.3e-10 68.6 60 56.7
Nitab4.5_0002788g0030 Nicotiana tabacum HOM05D007782 ORTHO05D009833 3.0e-10 68.2 45 66.7
FAN18G3918 Fragaria x ananassa HOM05D007782 ORTHO05D009833 5.1e-10 67.4 108 38.9
CAN.G98.14 Capsicum annuum HOM05D007782 ORTHO05D009833 6.6e-10 67.0 44 65.9
Potri.001G094750 Populus trichocarpa HOM05D007782 ORTHO05D009833 6.6e-10 67.0 57 63.2
vmacro11447 Vaccinium macrocarpon HOM05D007782 ORTHO05D009833 1.5e-09 65.9 65 53.8
Rhsim02G0240700 Rhododendron simsii HOM05D007782 ORTHO05D009833 4.3e-09 64.3 60 55.0
PSO135G0862 Papaver somniferum HOM05D007782 ORTHO05D009833 5.6e-09 63.9 67 52.2
BcaNung03194 Brassica carinata HOM05D007782 ORTHO05D009833 2.4e-07 58.5 39 64.1
AagrBONN_evm.TU.Sc2ySwM_362.1714 Anthoceros agrestis HOM05D007782 ORTHO05D009833 3.1e-07 58.2 54 46.3
Os01g0224300 Oryza sativa ssp. japonica HOM05D007782 ORTHO05D009833 3.1e-07 58.2 68 44.1
Medtr8g099240 Medicago truncatula HOM05D007782 ORTHO05D009833 1.5e-06 55.8 42 59.5
FAN13G1351 Fragaria x ananassa HOM05D007782 ORTHO05D009833 4.4e-06 54.3 78 43.6
FAN13G2639 Fragaria x ananassa HOM05D007782 ORTHO05D009833 4.4e-06 54.3 78 43.6


User provided reference genes

Program Settings