Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 6.7e-57 223.8 113 100.0
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 5.0e-28 127.9 69 88.4
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 1.1e-27 126.7 71 88.7
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 4.3e-27 124.8 84 79.8
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 1.4e-25 119.8 71 83.1
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.4e-25 119.8 71 84.5
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 2.3e-25 119.0 71 84.5
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 4.0e-25 118.2 71 83.1
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 6.8e-25 117.5 71 81.7
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 8.9e-25 117.1 67 80.6
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 1.5e-24 116.3 71 81.7
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 4.4e-24 114.8 71 80.3
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 7.5e-24 114.0 71 80.3
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 7.5e-24 114.0 71 80.3
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 1.3e-23 113.2 71 78.9
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 1.3e-23 113.2 74 74.3
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 4.9e-23 111.3 71 77.5
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 6.4e-23 110.9 71 77.5
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 6.4e-23 110.9 71 77.5
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 1.1e-22 110.2 71 78.9
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 1.1e-22 110.2 69 72.5
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.4e-22 109.8 71 78.9
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 1.8e-22 109.4 71 77.5
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 3.2e-22 108.6 71 76.1
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 4.1e-22 108.2 71 76.1
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 5.4e-22 107.8 69 76.8
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 5.4e-22 107.8 67 80.6
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 5.4e-22 107.8 71 73.2
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 7.0e-22 107.5 71 76.1
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 7.0e-22 107.5 71 77.5
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 9.2e-22 107.1 71 76.1
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.2e-21 106.7 71 74.6
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.2e-21 106.7 71 74.6
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.6e-21 106.3 71 76.1
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 1.6e-21 106.3 71 76.1
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.0e-21 105.9 71 74.6
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 2.7e-21 105.5 71 71.8
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 2.7e-21 105.5 71 76.1
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.7e-21 105.5 71 76.1
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.7e-21 105.5 71 76.1
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.7e-21 105.5 71 76.1
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 3.5e-21 105.1 71 74.6
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 3.5e-21 105.1 71 76.1
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 4.6e-21 104.8 71 76.1
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 4.6e-21 104.8 71 71.8
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 5.9e-21 104.4 71 71.8
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 5.9e-21 104.4 74 71.6
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 7.8e-21 104.0 71 74.6
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 7.8e-21 104.0 66 78.8
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 7.8e-21 104.0 72 76.4
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 7.8e-21 104.0 71 74.6
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 1.0e-20 103.6 69 73.9
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 1.0e-20 103.6 70 70.0
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 1.0e-20 103.6 70 74.3
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 1.3e-20 103.2 71 70.4
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 1.3e-20 103.2 71 71.8
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.3e-20 103.2 70 74.3
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 2.3e-20 102.4 69 69.6
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 3.0e-20 102.1 69 72.5
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 3.9e-20 101.7 71 74.6
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 3.9e-20 101.7 69 72.5
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 3.9e-20 101.7 69 72.5
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 3.9e-20 101.7 71 71.8
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 3.9e-20 101.7 72 72.2
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 3.9e-20 101.7 71 74.6
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 6.6e-20 100.9 69 71.0
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 6.6e-20 100.9 69 71.0
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 6.6e-20 100.9 69 71.0
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 8.6e-20 100.5 81 64.2
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 1.9e-19 99.4 74 67.6
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 2.5e-19 99.0 69 69.6
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 7.3e-19 97.4 90 60.0
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 9.5e-19 97.1 130 45.4
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 1.2e-18 96.7 79 63.3
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 1.6e-18 96.3 62 77.4
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 3.6e-18 95.1 69 71.0
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 4.7e-18 94.7 69 65.2
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 4.7e-18 94.7 70 68.6
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 6.2e-18 94.4 67 74.6
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 8.0e-18 94.0 69 65.2
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 8.0e-18 94.0 71 69.0
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 6.8e-17 90.9 68 67.6
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 6.8e-17 90.9 70 68.6
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 1.5e-16 89.7 70 67.1
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 3.4e-16 88.6 61 72.1
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 4.4e-16 88.2 65 64.6
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.7e-15 86.3 136 40.4
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 2.2e-15 85.9 59 71.2
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 2.7e-13 79.0 61 65.6
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 7.8e-13 77.4 67 61.2
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 7.8e-13 77.4 65 60.0
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 1.7e-12 76.3 51 74.5
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 5.0e-12 74.7 51 74.5
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 1.9e-11 72.8 59 57.6
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 5.6e-11 71.2 50 76.0
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 9.5e-11 70.5 40 80.0
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 4.7e-10 68.2 40 80.0
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 1.1e-09 67.0 165 31.5
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 1.8e-09 66.2 42 71.4
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 1.8e-09 66.2 41 80.5
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 5.2e-09 64.7 40 72.5
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 5.2e-09 64.7 41 75.6
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 5.2e-09 64.7 40 72.5
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 8.9e-09 63.9 37 78.4
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 1.2e-08 63.5 44 68.2
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 5.8e-08 61.2 40 75.0
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 5.8e-08 61.2 43 69.8
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.8e-08 61.2 40 67.5
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 2.9e-07 58.9 30 86.7


User provided reference genes

Program Settings