Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.U7WVQR Arachis hypogaea HOM05D006249 ORTHO05D007643 2.5e-147 525.4 258 100.0
arahy.Tifrunner.gnm1.ann1.3ZGG11 Arachis hypogaea HOM05D006249 ORTHO05D007643 4.6e-101 371.7 257 75.9
arahy.Tifrunner.gnm1.ann1.EN4NAA Arachis hypogaea HOM05D006249 ORTHO05D007643 1.7e-100 369.8 257 75.9
Lj1g0022179 Lotus japonicus HOM05D006249 ORTHO05D007643 3.0e-60 236.1 264 54.9
TPR.G5717 Trifolium pratense HOM05D006249 ORTHO05D007643 1.9e-59 233.4 230 54.3
VMungo1383G3440 Vigna mungo HOM05D004045 ORTHO05D004923 8.1e-58 228.0 263 51.7
Glyma.19G161200 Glycine max HOM05D006249 ORTHO05D007643 1.8e-57 226.9 257 52.1
Psat3g061040 Pisum sativum HOM05D006249 ORTHO05D007643 1.8e-57 226.9 257 49.8
Medtr7g096100 Medicago truncatula HOM05D006249 ORTHO05D007643 2.4e-57 226.5 260 49.6
Medtr4g076080 Medicago truncatula HOM05D006249 ORTHO05D007643 2.2e-55 219.9 257 48.6
Phvul.001G156700 Phaseolus vulgaris HOM05D006249 ORTHO05D007643 2.7e-53 213.0 257 50.6
Lalb_Chr25g0290111 Lupinus albus HOM05D006249 ORTHO05D007643 1.2e-48 197.6 198 54.5
arahy.Tifrunner.gnm1.ann1.GWHG3I Arachis hypogaea HOM05D006249 ORTHO05D007643 2.2e-47 193.4 101 97.0
RcHm_v2.0_Chr6g0289561 Rosa chinensis HOM05D006249 ORTHO05D007643 3.8e-47 192.6 261 45.2
CiPaw.03G257400 Carya illinoinensis HOM05D006249 ORTHO05D007643 1.1e-46 191.0 198 50.0
FvH4_2g22511 Fragaria vesca HOM05D006249 ORTHO05D007643 3.2e-46 189.5 261 44.8
Haze_24532 Corylus avellana HOM05D006249 ORTHO05D007643 1.6e-45 187.2 257 42.0
COL.COLO4_06075 Corchorus olitorius HOM05D006249 ORTHO05D007643 3.5e-45 186.0 260 42.7
Migut.D00374 Erythranthe guttata HOM05D006249 ORTHO05D007643 3.5e-45 186.0 255 43.9
Peaxi162Scf00049g00209 Petunia axillaris HOM05D006249 ORTHO05D007643 4.6e-45 185.7 209 47.8
Rhsim01G0269700 Rhododendron simsii HOM05D006249 ORTHO05D007643 4.6e-45 185.7 198 47.5
Thecc.01G267400 Theobroma cacao HOM05D006249 ORTHO05D007643 4.6e-45 185.7 246 42.3
GSVIVG01000723001 Vitis vinifera HOM05D006249 ORTHO05D007643 1.8e-44 183.7 247 45.3
Potri.005G218700 Populus trichocarpa HOM05D006249 ORTHO05D007643 3.9e-44 182.6 203 48.3
Solyc09g065860.3 Solanum lycopersicum HOM05D006249 ORTHO05D007643 3.9e-44 182.6 208 47.1
Sopen09g027650 Solanum pennellii HOM05D006249 ORTHO05D007643 3.9e-44 182.6 208 47.1
Manes.05G084500 Manihot esculenta HOM05D006249 ORTHO05D007643 5.1e-44 182.2 246 45.1
Eucgr.K03312 Eucalyptus grandis HOM05D006249 ORTHO05D007643 1.1e-43 181.0 198 49.5
QL12p042687 Quercus lobata HOM05D006249 ORTHO05D007643 1.9e-43 180.3 244 45.1
TAR362G0606 Trochodendron aralioides HOM05D006249 ORTHO05D007643 1.9e-43 180.3 246 44.7
ClCG01G001850 Citrullus lanatus HOM05D006249 ORTHO05D007643 5.7e-43 178.7 233 44.2
CANSAT01G0091 Cannabis sativa HOM05D006249 ORTHO05D007643 9.7e-43 177.9 197 50.3
Nitab4.5_0001556g0120 Nicotiana tabacum HOM05D006249 ORTHO05D007643 1.3e-42 177.6 207 46.9
Duzib138G0419 Durio zibethinus HOM05D006249 ORTHO05D007643 1.6e-42 177.2 260 42.3
Atru.chr5.1566 Acer truncatum HOM05D006249 ORTHO05D007643 2.2e-42 176.8 181 52.5
Atru.chr5.1568 Acer truncatum HOM05D006249 ORTHO05D007643 2.2e-42 176.8 181 52.5
C05p01650 Brassica napus HOM05D006249 ORTHO05D007643 2.2e-42 176.8 200 48.0
Ciclev10021257m.g Citrus clementina HOM05D006249 ORTHO05D007643 2.2e-42 176.8 198 49.0
CSS0046504 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 3.7e-42 176.0 199 48.2
arahy.Tifrunner.gnm1.ann1.AHQ53Z Arachis hypogaea HOM05D006249 ORTHO05D007643 4.8e-42 175.6 157 62.4
arahy.Tifrunner.gnm1.ann1.FBQK8B Arachis hypogaea HOM05D006249 ORTHO05D007643 4.8e-42 175.6 157 63.1
CsaV3_5G002000 Cucumis sativus L. HOM05D006249 ORTHO05D007643 4.8e-42 175.6 233 42.5
unitig_0.g1129 Utricularia gibba HOM05D006249 ORTHO05D007643 6.3e-42 175.3 201 45.8
Cpa.g.sc52.92 Carica papaya HOM05D006249 ORTHO05D007643 8.2e-42 174.9 240 43.3
FAN15G1994 Fragaria x ananassa HOM05D004045 ORTHO05D004923 8.2e-42 174.9 184 54.3
FAN15G3229 Fragaria x ananassa HOM05D004045 ORTHO05D004923 8.2e-42 174.9 184 54.3
Aa31LG1G9510 Aethionema arabicum HOM05D006249 ORTHO05D007643 1.8e-41 173.7 197 47.7
AT1G03030 Arabidopsis thaliana HOM05D006249 ORTHO05D007643 2.4e-41 173.3 199 47.7
MD05G1205700 Malus domestica HOM05D006249 ORTHO05D007643 2.4e-41 173.3 212 46.7
Prupe.8G232100 Prunus persica HOM05D006249 ORTHO05D007643 2.4e-41 173.3 243 42.4
CSS0032391 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 3.1e-41 172.9 199 47.7
CAN.G1259.4 Capsicum annuum HOM05D006249 ORTHO05D007643 3.1e-41 172.9 208 45.7
CARHR002370 Cardamine hirsuta HOM05D006249 ORTHO05D007643 3.1e-41 172.9 194 49.0
Sed0010412 Sechium edule HOM05D006249 ORTHO05D007643 3.1e-41 172.9 218 44.5
Aqoxy2G03531 Aquilegia oxysepala HOM05D006249 ORTHO05D007643 4.1e-41 172.6 208 44.2
BraA10t42442Z Brassica rapa HOM05D006249 ORTHO05D007643 4.1e-41 172.6 197 47.7
BcaC07g42289 Brassica carinata HOM05D006249 ORTHO05D007643 5.3e-41 172.2 197 47.7
BolC5t28944H Brassica oleracea HOM05D006249 ORTHO05D007643 5.3e-41 172.2 197 47.7
A10p01650 Brassica napus HOM05D006249 ORTHO05D007643 9.0e-41 171.4 197 47.7
AUR62011941 Chenopodium quinoa HOM05D006249 ORTHO05D007643 9.0e-41 171.4 219 42.5
MELO3C005753.2 Cucumis melo HOM05D006249 ORTHO05D007643 1.2e-40 171.0 197 45.7
Gohir.A11G127400 Gossypium hirsutum HOM05D006249 ORTHO05D007643 1.5e-40 170.6 242 40.9
Nn1g02571 Nelumbo nucifera HOM05D006249 ORTHO05D007643 1.5e-40 170.6 219 46.1
Nitab4.5_0000187g0200 Nicotiana tabacum HOM05D006249 ORTHO05D007643 1.5e-40 170.6 181 50.8
Cc01_g18850 Coffea canephora HOM05D006249 ORTHO05D007643 2.6e-40 169.9 246 39.8
ECA248G0032 Erigeron canadensis HOM05D006249 ORTHO05D007643 2.6e-40 169.9 198 44.9
Lj2C1159G1 Lonicera japonica HOM05D006249 ORTHO05D007643 2.6e-40 169.9 193 46.1
Sc17g0000990 Simmondsia chinensis HOM05D006249 ORTHO05D007643 3.4e-40 169.5 197 44.7
vmacro14872 Vaccinium macrocarpon HOM05D006249 ORTHO05D007643 3.4e-40 169.5 200 45.5
Carub.0001s0216 Capsella rubella HOM05D006249 ORTHO05D007643 5.9e-40 168.7 194 47.4
TWI18G0435 Tripterygium wilfordii HOM05D006249 ORTHO05D007643 7.7e-40 168.3 198 47.5
Thhalv10008317m.g Eutrema salsugineum HOM05D006249 ORTHO05D007643 1.0e-39 167.9 197 46.7
THA.LOC104801257 Tarenaya hassleriana HOM05D006249 ORTHO05D007643 1.3e-39 167.5 199 48.2
Ca_15970_v3 Cicer arietinum L. HOM05D006249 ORTHO05D007643 1.7e-39 167.2 129 65.1
Gohir.D11G132800 Gossypium hirsutum HOM05D006249 ORTHO05D007643 1.7e-39 167.2 198 44.4
AL1G12480 Arabidopsis lyrata HOM05D006249 ORTHO05D007643 2.9e-39 166.4 181 50.8
PGSC0003DMG400019301 Solanum tuberosum HOM05D006249 ORTHO05D007643 1.1e-38 164.5 198 46.0
Gorai.007G142000 Gossypium raimondii HOM05D006249 ORTHO05D007643 1.9e-38 163.7 198 45.5
Lsat_1_v5_gn_5_186740 Lactuca sativa HOM05D006249 ORTHO05D007643 1.9e-38 163.7 198 44.4
Hund09572 Selenicereus undatus HOM05D006249 ORTHO05D007643 1.9e-38 163.7 198 47.0
Dinv34569 Davidia involucrata HOM05D006249 ORTHO05D007643 3.2e-38 162.9 224 42.9
HanXRQChr01g0006841 Helianthus annuus HOM05D006249 ORTHO05D007643 5.5e-38 162.2 198 41.9
MSTRG.21512 Avicennia marina HOM05D006249 ORTHO05D007643 2.1e-37 160.2 198 44.9
PGR044G2488 Punica granatum HOM05D006249 ORTHO05D007643 2.7e-37 159.8 203 43.3
ATR0665G572 Amborella trichopoda HOM05D006249 ORTHO05D007643 4.6e-37 159.1 222 41.4
SGA_v2.0_scaffold1G00558 Striga asiatica HOM05D004045 ORTHO05D004923 6.1e-37 158.7 198 44.4
SalBow4G2323 Salvia bowleyana HOM05D006249 ORTHO05D007643 7.9e-37 158.3 258 39.5
RcHm_v2.0_Chr4g0397901 Rosa chinensis HOM05D006249 ORTHO05D007643 8.8e-36 154.8 181 49.2
MBI04_g06851_MAGBIO Magnolia biondii HOM05D006249 ORTHO05D007643 2.0e-35 153.7 237 40.1
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 5.7e-35 152.1 254 40.9
CDE06G0138 Ceratophyllum demersum HOM05D006249 ORTHO05D007643 7.4e-35 151.8 209 40.2
BcaC07g42286 Brassica carinata HOM05D006249 ORTHO05D007643 3.7e-34 149.4 200 42.0
arahy.Tifrunner.gnm1.ann1.X4NPJI Arachis hypogaea HOM05D004045 ORTHO05D004923 7.7e-32 141.7 89 84.3
EL10Ac5g10475 Beta vulgaris HOM05D006249 ORTHO05D007643 8.5e-31 138.3 157 48.4
Oeu018173.1 Olea europaea HOM05D006249 ORTHO05D007643 1.1e-30 137.9 253 37.9
AUR62032256 Chenopodium quinoa HOM05D006249 ORTHO05D007643 3.2e-30 136.3 219 37.4
Ah.02g111470 Amaranthus hybridus HOM05D006249 ORTHO05D007643 3.6e-29 132.9 239 36.8
HPP92_012490 Vanilla planifolia HOM05D006249 ORTHO05D007643 1.5e-27 127.5 207 35.3
BcaC07g42292 Brassica carinata HOM05D006249 ORTHO05D007643 2.0e-27 127.1 213 38.5
PSO832G1981 Papaver somniferum HOM05D006249 ORTHO05D007643 1.3e-26 124.4 159 42.8
Os12g0601200 Oryza sativa ssp. japonica HOM05D006249 ORTHO05D007643 6.3e-26 122.1 186 39.2
PSO210G4763 Papaver somniferum HOM05D006249 ORTHO05D007643 1.1e-25 121.3 159 42.1
AagrBONN_evm.TU.Sc2ySwM_228.3891 Anthoceros agrestis HOM05D006249 ORTHO05D007643 3.1e-25 119.8 208 36.5
Oeu018171.1 Olea europaea HOM05D006249 ORTHO05D007643 3.1e-25 119.8 161 44.1
SEGI_12640 Sequoiadendron giganteum HOM05D006249 ORTHO05D007643 5.3e-25 119.0 155 40.6
Sp1g02020 Schrenkiella parvula HOM05D006249 ORTHO05D007643 1.2e-24 117.9 106 54.7
Zm00001eb135540 Zea mays HOM05D006249 ORTHO05D007643 2.0e-24 117.1 194 39.2
SMO358G0282 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 1.1e-22 111.3 179 41.3
Mapoly0096s0074 Marchantia polymorpha HOM05D006249 ORTHO05D007643 5.5e-22 109.0 195 36.4
CBR_g19145 Chara braunii HOM05D006249 ORTHO05D007643 1.1e-19 101.3 191 36.6
Pp3c17_16800 Physcomitrium patens HOM05D006249 ORTHO05D007643 1.7e-18 97.4 181 36.5
Glyma.03G158832 Glycine max HOM05D006249 ORTHO05D007643 8.2e-18 95.1 67 71.6
Hund30725 Selenicereus undatus HOM05D006249 ORTHO05D007643 1.1e-17 94.7 76 60.5
Hund30696 Selenicereus undatus HOM05D006249 ORTHO05D007643 2.0e-16 90.5 76 59.2
Actinidia21156 Actinidia chinensis HOM05D006249 ORTHO05D007643 7.2e-14 82.0 45 75.6
Cre02.g101000 Chlamydomonas reinhardtii HOM05D006249 ORTHO05D007643 1.2e-08 64.7 202 25.7
SHI34902 Sapria himalayana HOM05D006249 ORTHO05D007643 5.9e-08 62.4 171 28.7
SHI49503 Sapria himalayana HOM05D000624 ORTHO05D000495 9.4e-06 55.1 48 60.4


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