Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 6.6e-210 733.8 375 100.0
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 1.4e-167 593.2 392 83.2
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 1.2e-139 500.4 391 69.3
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 6.1e-139 498.0 397 66.2
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 1.4e-138 496.9 395 68.6
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 4.0e-138 495.4 393 68.7
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 8.3e-136 487.6 323 78.3
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 5.4e-135 485.0 394 67.5
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 3.5e-134 482.3 379 67.3
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 8.6e-133 477.6 393 67.7
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 7.3e-132 474.6 309 77.7
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 1.8e-130 469.9 366 67.5
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 5.2e-130 468.4 377 67.9
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 6.8e-130 468.0 355 68.7
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 3.4e-129 465.7 339 72.3
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 7.5e-129 464.5 339 72.0
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 6.4e-128 461.5 339 71.4
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 3.5e-126 455.7 312 75.0
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 4.6e-126 455.3 396 63.9
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 7.8e-126 454.5 322 73.0
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 1.3e-125 453.8 316 73.4
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 3.0e-125 452.6 316 72.8
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 6.6e-125 451.4 315 73.0
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 8.6e-125 451.1 322 71.4
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 8.6e-125 451.1 312 73.4
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 2.5e-124 449.5 360 65.0
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 4.3e-124 448.7 316 73.1
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 1.6e-123 446.8 312 73.1
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 1.4e-122 443.7 314 72.6
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 2.3e-122 443.0 315 73.0
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 2.3e-122 443.0 309 73.5
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 2.3e-122 443.0 309 72.8
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 3.1e-122 442.6 314 71.7
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 8.9e-122 441.0 309 72.5
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 3.4e-121 439.1 343 67.9
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 4.4e-121 438.7 370 61.9
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 7.5e-121 438.0 380 63.4
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 7.5e-121 438.0 367 62.7
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 1.7e-120 436.8 365 62.5
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 2.9e-120 436.0 316 70.6
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 4.9e-120 435.3 312 71.2
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 6.4e-120 434.9 349 66.2
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 8.3e-120 434.5 333 68.8
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 1.1e-119 434.1 313 70.6
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 1.9e-119 433.3 396 60.6
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 4.1e-119 432.2 316 69.9
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 4.1e-119 432.2 312 69.6
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 7.1e-119 431.4 315 69.2
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 9.2e-119 431.0 347 64.6
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 9.2e-119 431.0 318 72.0
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 6.0e-118 428.3 340 65.6
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.3e-117 427.2 388 59.0
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 1.3e-117 427.2 326 68.7
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 1.7e-117 426.8 315 70.5
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 3.9e-117 425.6 315 69.5
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 3.9e-117 425.6 314 68.8
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 2.5e-116 422.9 316 69.6
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 8.1e-115 417.9 369 62.1
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 1.8e-114 416.8 310 68.1
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 4.0e-114 415.6 310 68.4
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 7.5e-113 411.4 310 67.7
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 7.5e-113 411.4 314 67.5
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 2.2e-112 409.8 314 67.2
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 2.9e-112 409.5 312 67.9
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 2.9e-112 409.5 315 67.3
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 4.9e-112 408.7 287 72.1
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 1.4e-111 407.1 315 66.7
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 3.2e-111 406.0 311 69.1
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 9.2e-111 404.4 310 67.1
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 1.6e-110 403.7 318 65.4
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 2.7e-110 402.9 310 65.5
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 3.5e-110 402.5 314 65.9
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 6.0e-110 401.7 311 65.9
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 1.0e-109 401.0 315 66.0
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 2.3e-109 399.8 309 68.3
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 6.6e-109 398.3 311 66.6
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 8.6e-109 397.9 309 68.3
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 1.5e-108 397.1 316 65.5
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 1.9e-108 396.7 311 66.6
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 7.3e-108 394.8 311 65.9
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 2.8e-107 392.9 311 66.2
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 2.8e-107 392.9 311 66.2
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 6.2e-107 391.7 310 64.8
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 8.1e-107 391.3 334 64.1
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 6.8e-106 388.3 305 66.6
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 3.8e-104 382.5 295 68.5
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 2.7e-102 376.3 327 61.5
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 6.0e-102 375.2 317 61.2
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 5.6e-100 368.6 392 54.1
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 4.4e-97 359.0 284 64.1
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 7.6e-97 358.2 257 70.8
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 1.3e-96 357.5 255 70.2
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 2.2e-96 356.7 359 54.0
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 8.4e-96 354.8 313 60.1
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 9.3e-95 351.3 295 60.7
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 1.0e-93 347.8 350 55.4
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 3.9e-93 345.9 340 56.5
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 2.8e-91 339.7 316 58.2
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 3.6e-91 339.3 335 56.4
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 1.2e-86 324.3 290 60.3
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 4.6e-86 322.4 276 62.3
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 7.6e-81 305.1 229 72.1
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 6.2e-75 285.4 203 70.4
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 6.9e-74 282.0 234 63.2
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 8.4e-72 275.0 339 47.2
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 3.5e-70 269.6 216 63.0
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 6.1e-70 268.9 286 54.5
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 7.4e-68 261.9 314 49.0
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 2.0e-65 253.8 307 49.2
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 2.3e-61 240.4 309 47.9
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 2.4e-58 230.3 266 48.1
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 8.5e-56 221.9 181 63.5
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 2.5e-47 193.7 283 42.8
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 1.0e-45 188.3 354 38.4
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 2.2e-43 180.6 99 96.0
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 2.2e-43 180.6 99 96.0
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 1.8e-42 177.6 99 93.9
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 9.4e-39 165.2 134 64.9
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 6.1e-38 162.5 106 78.3
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 6.1e-38 162.5 106 78.3
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 1.7e-27 127.9 107 60.7
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea HOM05D006342 ORTHO05D008155 5.4e-26 122.9 82 84.1
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 2.5e-23 114.0 100 60.0
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 6.4e-19 99.4 96 55.2
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 4.6e-17 93.2 103 54.4
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 2.9e-11 73.9 54 61.1
Potri.001G311400 Populus trichocarpa HOM05D006342 ORTHO05D332779 1.1e-07 62.0 93 43.0


User provided reference genes

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