Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 4.3e-245 850.9 434 100.0
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 3.7e-244 847.8 434 99.5
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 2.4e-195 685.6 448 82.1
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 2.2e-180 636.0 447 76.7
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 1.3e-177 626.7 441 76.4
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 1.5e-176 623.2 449 76.2
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 3.4e-173 612.1 443 74.3
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 3.2e-163 578.9 453 69.1
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 9.2e-163 577.4 458 68.8
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 3.9e-161 572.0 380 80.8
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 1.5e-160 570.1 458 68.1
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 1.6e-159 566.6 453 69.3
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 2.3e-158 562.8 450 69.6
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 1.4e-155 553.5 446 66.1
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 1.4e-155 553.5 438 70.1
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 3.3e-152 542.3 466 65.0
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 7.3e-152 541.2 439 67.2
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 9.5e-152 540.8 454 65.0
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 1.1e-150 537.3 456 65.4
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 6.8e-150 534.6 453 65.3
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 6.4e-148 528.1 456 63.8
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 2.4e-147 526.2 454 63.7
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 4.6e-146 521.9 458 65.9
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 6.0e-146 521.5 454 63.2
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 5.1e-145 518.5 440 66.8
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 8.7e-145 517.7 454 62.6
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 1.5e-144 516.9 454 62.6
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 6.2e-143 511.5 395 70.6
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 5.3e-142 508.4 451 63.9
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 2.6e-141 506.1 450 63.3
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 5.8e-141 505.0 450 64.0
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 9.9e-141 504.2 476 62.6
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 9.9e-141 504.2 418 66.0
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 4.9e-140 501.9 471 61.8
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 1.9e-139 500.0 416 65.1
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 3.0e-137 492.7 447 61.7
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 3.9e-137 492.3 453 59.8
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 3.6e-135 485.7 467 61.2
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 1.8e-134 483.4 444 60.6
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 1.8e-134 483.4 465 61.1
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 4.0e-134 482.3 457 60.0
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 4.2e-131 472.2 381 69.6
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 3.9e-129 465.7 457 60.0
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 8.7e-129 464.5 519 53.8
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 1.9e-128 463.4 475 56.6
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 4.3e-128 462.2 398 62.8
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 9.6e-128 461.1 451 57.2
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 1.3e-127 460.7 456 58.3
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 1.6e-127 460.3 457 57.5
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 1.1e-126 457.6 451 58.3
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 2.4e-126 456.4 457 57.1
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 3.1e-126 456.1 457 57.5
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 1.7e-124 450.3 457 56.2
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.4e-123 447.2 471 57.3
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 1.9e-123 446.8 456 57.5
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 2.1e-122 443.4 470 57.0
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 2.7e-122 443.0 456 54.4
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 6.0e-122 441.8 454 57.0
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 7.9e-122 441.4 470 56.6
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 8.7e-121 438.0 471 56.9
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 4.3e-120 435.6 459 56.6
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 5.7e-120 435.3 461 56.8
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 4.8e-119 432.2 469 56.9
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 1.1e-118 431.0 472 56.6
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 2.6e-117 426.4 323 71.5
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 8.4e-116 421.4 430 54.2
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 1.1e-115 421.0 454 54.0
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 2.1e-114 416.8 373 60.9
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 2.3e-113 413.3 445 52.6
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 3.0e-113 412.9 457 56.0
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 1.1e-112 411.0 338 65.4
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 1.1e-112 411.0 330 67.9
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 1.1e-110 404.4 456 53.3
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 3.1e-110 402.9 457 53.0
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 4.1e-110 402.5 460 52.4
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 5.3e-110 402.1 456 52.9
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 5.3e-110 402.1 457 55.6
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 6.9e-110 401.7 460 52.2
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 2.6e-109 399.8 404 54.7
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 1.0e-108 397.9 466 53.2
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 1.0e-108 397.9 445 53.5
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 1.9e-107 393.7 462 53.2
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 7.2e-107 391.7 368 60.3
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 3.0e-105 386.3 251 79.7
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 3.7e-103 379.4 408 52.5
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 5.3e-102 375.6 516 46.1
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.3e-100 370.9 358 60.6
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 2.9e-100 369.8 339 60.5
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 4.7e-98 362.5 381 53.3
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 4.8e-95 352.4 344 59.0
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 5.9e-93 345.5 412 51.7
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 2.1e-82 310.5 425 48.0
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 3.0e-81 306.6 482 44.6
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 1.7e-79 300.8 276 60.9
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 2.5e-75 287.0 377 47.7
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 1.4e-73 281.2 423 45.4
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 3.0e-73 280.0 453 38.9
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.5e-72 277.7 479 40.5
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 4.1e-70 269.6 477 39.8
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 7.7e-69 265.4 178 74.2
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 2.0e-56 224.2 295 46.1
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 2.6e-56 223.8 180 70.0
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 2.9e-55 220.3 207 61.8
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 6.4e-55 219.2 356 39.9
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.9e-54 217.6 376 41.8
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.8e-33 147.9 137 51.8
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 5.4e-30 136.3 177 45.2
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 9.9e-24 115.5 162 43.2
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 9.9e-16 89.0 60 71.7
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 3.9e-12 77.0 46 78.3
CAN.G166.15 Capsicum annuum HOM05D007103 ORTHO05D008948 1.8e-09 68.2 91 42.9


User provided reference genes

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