Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.U5HRAC Arachis hypogaea HOM05D002082 ORTHO05D002130 0.0e+00 1224.9 613 100.0
arahy.Tifrunner.gnm1.ann1.XVC037 Arachis hypogaea HOM05D002082 ORTHO05D002130 0.0e+00 1156.4 611 95.1
Glyma.08G015100 Glycine max HOM05D002082 ORTHO05D002130 4.7e-112 409.5 689 42.5
Glyma.05G208500 Glycine max HOM05D002082 ORTHO05D002130 6.6e-90 335.9 631 41.2
VMungo0251G2745 Vigna mungo HOM05D002082 ORTHO05D002130 4.0e-87 326.6 673 38.9
Lalb_Chr16g0390031 Lupinus albus HOM05D002082 ORTHO05D002130 1.1e-84 318.5 648 39.0
Phvul.002G290200 Phaseolus vulgaris HOM05D002082 ORTHO05D002130 2.3e-79 300.8 518 43.1
Ca_17526_v3 Cicer arietinum L. HOM05D002082 ORTHO05D002130 1.1e-65 255.4 341 46.3
TPR.G12877 Trifolium pratense HOM05D002082 ORTHO05D002130 1.1e-65 255.4 623 34.3
Psat7g032640 Pisum sativum HOM05D004282 ORTHO05D006804 1.1e-60 238.8 623 33.4
Medtr8g098335 Medicago truncatula HOM05D002082 ORTHO05D002130 5.3e-55 219.9 462 37.7
FAN13G1469 Fragaria x ananassa HOM05D002082 ORTHO05D002130 7.7e-30 136.3 618 28.0
FvH4_5g02600 Fragaria vesca HOM05D002082 ORTHO05D002130 1.0e-29 136.0 637 27.3
FAN18G2062 Fragaria x ananassa HOM05D002082 ORTHO05D002130 6.5e-29 133.3 648 27.2
FAN04G2070 Fragaria x ananassa HOM05D002082 ORTHO05D002130 1.1e-28 132.5 651 26.7
QL12p032830 Quercus lobata HOM05D002082 ORTHO05D002130 2.5e-28 131.3 662 27.5
FAN08G0625 Fragaria x ananassa HOM05D002082 ORTHO05D002130 7.2e-28 129.8 648 26.2
RcHm_v2.0_Chr7g0197501 Rosa chinensis HOM05D002082 ORTHO05D002130 1.8e-23 115.2 663 25.0
CANSAT56G1625 Cannabis sativa HOM05D002082 ORTHO05D002130 1.9e-20 105.1 626 25.2
Prupe.5G101000 Prunus persica HOM05D002082 ORTHO05D002130 1.6e-19 102.1 358 31.0
Ciclev10018878m.g Citrus clementina HOM05D002082 ORTHO05D002130 3.6e-19 100.9 247 34.8
Potri.001G103400 Populus trichocarpa HOM05D002082 ORTHO05D002130 1.4e-18 99.0 571 27.7
Cfa012223 Carpinus fangiana HOM05D002082 ORTHO05D002130 2.3e-18 98.2 325 30.2
MD06G1085000 Malus domestica HOM05D002082 ORTHO05D002130 3.9e-18 97.4 677 24.7
MD14G1105800 Malus domestica HOM05D002082 ORTHO05D002130 1.5e-17 95.5 386 28.5
Atru.chr9.2180 Acer truncatum HOM05D002082 ORTHO05D002130 2.0e-17 95.1 396 28.0
Nitab4.5_0001615g0070 Nicotiana tabacum HOM05D002082 ORTHO05D002130 2.0e-17 95.1 263 32.7
CANSAT56G4299 Cannabis sativa HOM05D002082 ORTHO05D002130 4.4e-17 94.0 318 30.5
CANSAT21G1957 Cannabis sativa HOM05D002082 ORTHO05D002130 5.7e-17 93.6 336 29.8
CiPaw.11G134400 Carya illinoinensis HOM05D002082 ORTHO05D002130 7.4e-17 93.2 547 27.4
Thecc.03G279700 Theobroma cacao HOM05D002082 ORTHO05D002130 1.7e-16 92.0 433 28.4
ClCG01G002640 Citrullus lanatus HOM05D002082 ORTHO05D002130 3.7e-16 90.9 290 30.3
Haze_08787 Corylus avellana HOM05D002082 ORTHO05D002130 3.7e-16 90.9 488 27.3
CsaV3_5G002760 Cucumis sativus L. HOM05D002082 ORTHO05D002130 8.2e-16 89.7 283 31.1
Solyc08g081160.3 Solanum lycopersicum HOM05D002082 ORTHO05D002130 1.1e-15 89.4 229 34.1
Dinv37634 Davidia involucrata HOM05D002082 ORTHO05D002130 1.8e-15 88.6 762 22.2
TAR629G0527 Trochodendron aralioides HOM05D002082 ORTHO05D002130 1.8e-15 88.6 246 32.1
Nitab4.5_0000678g0100 Nicotiana tabacum HOM05D002082 ORTHO05D002130 3.1e-15 87.8 238 31.9
Dinv43818 Davidia involucrata HOM05D002082 ORTHO05D002130 4.1e-15 87.4 222 34.2
PGSC0003DMG400012204 Solanum tuberosum HOM05D002082 ORTHO05D002130 7.0e-15 86.7 345 27.5
Sopen08g029460 Solanum pennellii HOM05D002082 ORTHO05D002130 1.6e-14 85.5 345 27.8
Peaxi162Scf00119g00948 Petunia axillaris HOM05D002082 ORTHO05D002130 3.5e-14 84.3 567 26.1
TAR636G0944 Trochodendron aralioides HOM05D002082 ORTHO05D002130 3.5e-14 84.3 363 28.9
Sabra01G0078100 Salix brachista HOM05D002082 ORTHO05D002130 5.9e-14 83.6 432 26.6
Duzib268G0073 Durio zibethinus HOM05D002082 ORTHO05D002130 1.3e-13 82.4 614 23.6
Sed0022826 Sechium edule HOM05D002082 ORTHO05D002130 1.3e-13 82.4 334 28.1
MELO3C005681.2 Cucumis melo HOM05D002082 ORTHO05D002130 2.2e-13 81.6 278 30.9
MBI17_g24689_MAGBIO Magnolia biondii HOM05D002082 ORTHO05D002130 3.8e-13 80.9 469 28.4
GSVIVG01026934001 Vitis vinifera HOM05D002082 ORTHO05D002130 3.8e-13 80.9 236 29.2
TAR375G0315 Trochodendron aralioides HOM05D002082 ORTHO05D002130 5.0e-13 80.5 298 31.9
Manes.02G019700 Manihot esculenta HOM05D002082 ORTHO05D002130 6.5e-13 80.1 376 26.3
Gohir.A12G229800 Gossypium hirsutum HOM05D002082 ORTHO05D002130 1.1e-12 79.3 435 24.4
Ciclev10018716m.g Citrus clementina HOM05D002082 ORTHO05D002130 1.5e-12 79.0 506 26.3
Duzib084G0248 Durio zibethinus HOM05D002082 ORTHO05D002130 1.5e-12 79.0 355 26.2
Gorai.008G247100 Gossypium raimondii HOM05D002082 ORTHO05D002130 1.5e-12 79.0 436 24.1
Cc08_g14810 Coffea canephora HOM05D002082 ORTHO05D002130 1.9e-12 78.6 173 34.7
COL.COLO4_34473 Corchorus olitorius HOM05D002082 ORTHO05D002130 1.9e-12 78.6 550 26.7
Duzib205G1702 Durio zibethinus HOM05D002082 ORTHO05D002130 2.5e-12 78.2 358 28.8
Manes.01G059400 Manihot esculenta HOM05D002082 ORTHO05D002130 3.2e-12 77.8 611 23.2
Cpa.g.sc74.55 Carica papaya HOM05D002082 ORTHO05D002130 7.2e-12 76.6 236 30.9
Nn1g01537 Nelumbo nucifera HOM05D002082 ORTHO05D002130 9.4e-12 76.3 316 29.7
COL.COLO4_20185 Corchorus olitorius HOM05D002082 ORTHO05D002130 1.6e-11 75.5 335 26.0
Medtr8g030750 Medicago truncatula HOM05D002082 ORTHO05D002130 2.1e-11 75.1 551 24.5
Oeu052948.3 Olea europaea HOM05D002082 ORTHO05D002130 2.1e-11 75.1 280 29.3
GSVIVG01019747001 Vitis vinifera HOM05D002082 ORTHO05D002130 2.1e-11 75.1 459 25.7
Dinv32485 Davidia involucrata HOM05D002082 ORTHO05D002130 3.6e-11 74.3 284 29.9
TPR.G10305 Trifolium pratense HOM05D002082 ORTHO05D002130 6.1e-11 73.6 648 23.5
Glyma.09G259200 Glycine max HOM05D002082 ORTHO05D002130 8.0e-11 73.2 616 25.0
Thecc.04G199500 Theobroma cacao HOM05D002082 ORTHO05D002130 8.0e-11 73.2 280 27.5
Duzib212G0601 Durio zibethinus HOM05D002082 ORTHO05D002130 1.0e-10 72.8 313 27.5
Gohir.D12G230900 Gossypium hirsutum HOM05D002082 ORTHO05D002130 1.8e-10 72.0 439 23.5
Actinidia20902 Actinidia chinensis HOM05D002082 ORTHO05D002130 3.0e-10 71.2 404 25.5
CSS0011549 Camellia sinensis var. sinensis HOM05D002082 ORTHO05D002130 3.0e-10 71.2 336 27.1
Nn6g33418 Nelumbo nucifera HOM05D002082 ORTHO05D002130 3.0e-10 71.2 212 30.7
arahy.Tifrunner.gnm1.ann1.Q9SV2L Arachis hypogaea HOM05D002082 ORTHO05D002130 4.0e-10 70.9 318 28.9
Psat4g155680 Pisum sativum HOM05D002082 ORTHO05D002130 4.0e-10 70.9 549 24.4
Sc26g0000910 Simmondsia chinensis HOM05D002082 ORTHO05D002130 4.0e-10 70.9 262 31.3
Aqoxy7G00305 Aquilegia oxysepala HOM05D002082 ORTHO05D002130 5.2e-10 70.5 314 26.8
DCAR_006930 Daucus carota HOM05D002082 ORTHO05D002130 6.7e-10 70.1 176 32.4
Oeu011042.2 Olea europaea HOM05D002082 ORTHO05D002130 6.7e-10 70.1 260 26.5
arahy.Tifrunner.gnm1.ann1.H5386A Arachis hypogaea HOM05D002082 ORTHO05D002130 8.8e-10 69.7 343 26.2
RcHm_v2.0_Chr1g0355281 Rosa chinensis HOM05D002082 ORTHO05D002130 8.8e-10 69.7 278 29.9
Eucgr.E00627 Eucalyptus grandis HOM05D002082 ORTHO05D002130 1.2e-09 69.3 208 29.8
BcaB01g02250 Brassica carinata HOM05D002082 ORTHO05D002130 2.0e-09 68.6 221 31.2
Glyma.03G009000 Glycine max HOM05D002082 ORTHO05D002130 2.0e-09 68.6 594 24.9
Cpa.g.sc11.5 Carica papaya HOM05D002082 ORTHO05D002130 2.6e-09 68.2 193 30.1
QL08p048793 Quercus lobata HOM05D002082 ORTHO05D002130 2.6e-09 68.2 295 27.1
Duzib068G0569 Durio zibethinus HOM05D002082 ORTHO05D002130 3.3e-09 67.8 471 26.5
Cc02_g38040 Coffea canephora HOM05D002082 ORTHO05D002130 4.4e-09 67.4 206 31.6
vmacro20942 Vaccinium macrocarpon HOM05D002082 ORTHO05D002130 5.7e-09 67.0 292 26.7
Actinidia10009 Actinidia chinensis HOM05D002082 ORTHO05D002130 7.5e-09 66.6 191 33.0
MD07G1136900 Malus domestica HOM05D002082 ORTHO05D002130 7.5e-09 66.6 195 31.3
Sabra14G0061400 Salix brachista HOM05D002082 ORTHO05D002130 7.5e-09 66.6 190 27.9
Gorai.006G223200 Gossypium raimondii HOM05D002082 ORTHO05D002130 9.7e-09 66.2 219 30.1
Potri.014G084600 Populus trichocarpa HOM05D002082 ORTHO05D002130 9.7e-09 66.2 339 25.7
Gohir.A03G095500 Gossypium hirsutum HOM05D002082 ORTHO05D002130 1.3e-08 65.9 311 25.4
Sp6g00480 Schrenkiella parvula HOM05D002082 ORTHO05D002130 1.3e-08 65.9 232 27.2
Gohir.A08G183050 Gossypium hirsutum HOM05D002082 ORTHO05D011139 1.7e-08 65.5 285 29.1
Gohir.D09G199500 Gossypium hirsutum HOM05D002082 ORTHO05D002130 1.7e-08 65.5 219 29.7
Gorai.005G030500 Gossypium raimondii HOM05D002082 ORTHO05D002130 1.7e-08 65.5 216 28.7
MD01G1060800 Malus domestica HOM05D002082 ORTHO05D002130 1.7e-08 65.5 175 33.1
Aa31LG5G540 Aethionema arabicum HOM05D002082 ORTHO05D002130 2.2e-08 65.1 174 30.5
MSTRG.17269 Avicennia marina HOM05D002082 ORTHO05D002130 2.8e-08 64.7 510 23.7
Gohir.D02G113800 Gossypium hirsutum HOM05D002082 ORTHO05D002130 2.8e-08 64.7 311 25.4
Nitab4.5_0000583g0100 Nicotiana tabacum HOM05D002082 ORTHO05D002130 2.8e-08 64.7 285 26.7
Gohir.A02G020600 Gossypium hirsutum HOM05D002082 ORTHO05D002130 3.7e-08 64.3 185 33.5
Actinidia12703 Actinidia chinensis HOM05D002082 ORTHO05D002130 4.8e-08 63.9 239 30.5
Gorai.005G129500 Gossypium raimondii HOM05D002082 ORTHO05D002130 4.8e-08 63.9 311 25.1
HPP92_014791 Vanilla planifolia HOM05D002082 ORTHO05D002130 4.8e-08 63.9 156 30.8
AT4G00440 Arabidopsis thaliana HOM05D002082 ORTHO05D002130 6.3e-08 63.5 303 26.7
arahy.Tifrunner.gnm1.ann1.XE9T79 Arachis hypogaea HOM05D002082 ORTHO05D002130 6.3e-08 63.5 273 24.5
Carub.0006s3682 Capsella rubella HOM05D002082 ORTHO05D002130 6.3e-08 63.5 303 27.1
Thhalv10028418m.g Eutrema salsugineum HOM05D002082 ORTHO05D002130 6.3e-08 63.5 230 27.0
Nitab4.5_0006762g0010 Nicotiana tabacum HOM05D002082 ORTHO05D002130 6.3e-08 63.5 286 26.9
PGR042G2129 Punica granatum HOM05D002082 ORTHO05D002130 6.3e-08 63.5 217 27.6
ATR0680G229 Amborella trichopoda HOM05D002082 ORTHO05D002130 1.1e-07 62.8 105 36.2
Gohir.D02G024600 Gossypium hirsutum HOM05D002082 ORTHO05D002130 1.4e-07 62.4 215 28.8
Phvul.008G062300 Phaseolus vulgaris HOM05D002082 ORTHO05D002130 1.4e-07 62.4 197 29.9
Gohir.A09G205900 Gossypium hirsutum HOM05D002082 ORTHO05D002130 1.8e-07 62.0 188 30.9
AUR62004359 Chenopodium quinoa HOM05D002082 ORTHO05D002130 2.4e-07 61.6 185 32.4
Gohir.D08G201600 Gossypium hirsutum HOM05D002082 ORTHO05D011139 2.4e-07 61.6 334 28.4
Lalb_Chr04g0256961 Lupinus albus HOM05D002082 ORTHO05D002130 2.4e-07 61.6 190 32.1
Potri.002G160000 Populus trichocarpa HOM05D002082 ORTHO05D002130 2.4e-07 61.6 214 27.1
Sabra02G0127000 Salix brachista HOM05D002082 ORTHO05D002130 2.4e-07 61.6 435 24.1
TWI23G1246 Tripterygium wilfordii HOM05D002082 ORTHO05D002130 2.4e-07 61.6 279 26.9
PSO478G2816 Papaver somniferum HOM05D002082 ORTHO05D002130 3.1e-07 61.2 216 29.6
Prupe.2G170700 Prunus persica HOM05D002082 ORTHO05D002130 3.1e-07 61.2 511 22.9
arahy.Tifrunner.gnm1.ann1.7UV203 Arachis hypogaea HOM05D002082 ORTHO05D002130 4.1e-07 60.8 273 24.5
CARHR248540 Cardamine hirsuta HOM05D002082 ORTHO05D002130 4.1e-07 60.8 570 24.2
FAN03G3385 Fragaria x ananassa HOM05D002082 ORTHO05D002130 4.1e-07 60.8 280 25.4
Gohir.A08G013780 Gossypium hirsutum HOM05D002082 ORTHO05D002130 5.3e-07 60.5 211 30.8
Medtr7g077740 Medicago truncatula HOM05D002082 ORTHO05D002130 5.3e-07 60.5 256 27.7
Oeu053748.1 Olea europaea HOM05D002082 ORTHO05D002130 5.3e-07 60.5 259 27.4
PSO782G2744 Papaver somniferum HOM05D002082 ORTHO05D002130 5.3e-07 60.5 216 28.7
THA.LOC104825840 Tarenaya hassleriana HOM05D002082 ORTHO05D002130 5.3e-07 60.5 211 27.5
TWI14G1346 Tripterygium wilfordii HOM05D002082 ORTHO05D002130 5.3e-07 60.5 293 25.3
FAN10G2676 Fragaria x ananassa HOM05D002082 ORTHO05D002130 7.0e-07 60.1 268 26.1
MBI18_g06450_MAGBIO Magnolia biondii HOM05D002082 ORTHO05D002130 7.0e-07 60.1 250 29.6
Hund27273 Selenicereus undatus HOM05D002082 ORTHO05D002130 7.0e-07 60.1 163 32.5
SGA_v2.0_scaffold95G28833 Striga asiatica HOM05D002082 ORTHO05D002130 7.0e-07 60.1 200 26.5
Atru.chr5.499 Acer truncatum HOM05D002082 ORTHO05D002130 9.1e-07 59.7 207 29.0
EL10Ac1g00415 Beta vulgaris HOM05D002082 ORTHO05D002130 9.1e-07 59.7 182 34.1
AUR62022567 Chenopodium quinoa HOM05D002082 ORTHO05D002130 9.1e-07 59.7 290 26.9
FAN01G1477 Fragaria x ananassa HOM05D002082 ORTHO05D002130 9.1e-07 59.7 335 25.4
Glyma.18G233100 Glycine max HOM05D002082 ORTHO05D002130 9.1e-07 59.7 189 30.7
Solyc01g094640.4 Solanum lycopersicum HOM05D002082 ORTHO05D002130 9.1e-07 59.7 363 24.8
CSS0003251 Camellia sinensis var. sinensis HOM05D002082 ORTHO05D002130 1.2e-06 59.3 261 31.0
Rhsim07G0014800 Rhododendron simsii HOM05D002082 ORTHO05D002130 1.2e-06 59.3 327 27.5
Hund16922 Selenicereus undatus HOM05D002082 ORTHO05D002130 1.2e-06 59.3 173 32.9
TPR.G37805 Trifolium pratense HOM05D002082 ORTHO05D002130 1.2e-06 59.3 157 33.8
AL6G53020 Arabidopsis lyrata HOM05D002082 ORTHO05D002130 1.6e-06 58.9 566 22.6
A09p00480 Brassica napus HOM05D002082 ORTHO05D002130 1.6e-06 58.9 184 32.6
Cfa003924 Carpinus fangiana HOM05D002082 ORTHO05D002130 1.6e-06 58.9 184 29.3
Gorai.004G212500 Gossypium raimondii HOM05D002082 ORTHO05D011139 1.6e-06 58.9 332 28.0
Ah.05g180600 Amaranthus hybridus HOM05D002082 ORTHO05D002130 2.0e-06 58.5 185 33.0
Ca_07921_v3 Cicer arietinum L. HOM05D002082 ORTHO05D002130 2.0e-06 58.5 153 32.7
FAN10G2557 Fragaria x ananassa HOM05D002082 ORTHO05D002130 2.0e-06 58.5 268 26.1
Peaxi162Scf00020g00328 Petunia axillaris HOM05D002082 ORTHO05D002130 2.7e-06 58.2 287 24.7
Psat3g108320 Pisum sativum HOM05D002082 ORTHO05D002130 2.7e-06 58.2 276 25.7
Sc23g0002880 Simmondsia chinensis HOM05D002082 ORTHO05D002130 2.7e-06 58.2 181 29.8
Sopen01g038450 Solanum pennellii HOM05D002082 ORTHO05D002130 2.7e-06 58.2 363 24.8
BcaC01g06880 Brassica carinata HOM05D002082 ORTHO05D002130 3.5e-06 57.8 168 34.5
C03p39220 Brassica napus HOM05D002082 ORTHO05D002130 3.5e-06 57.8 168 34.5
BolC3t16193H Brassica oleracea HOM05D002082 ORTHO05D002130 3.5e-06 57.8 168 34.5
FvH4_7g14290 Fragaria vesca HOM05D002082 ORTHO05D002130 3.5e-06 57.8 337 24.9
FAN06G4139 Fragaria x ananassa HOM05D002082 ORTHO05D002130 3.5e-06 57.8 337 24.9
HanXRQChr13g0409001 Helianthus annuus HOM05D002769 ORTHO05D003160 3.5e-06 57.8 162 30.9
THA.LOC104801437 Tarenaya hassleriana HOM05D002082 ORTHO05D002130 3.5e-06 57.8 235 27.2
MSTRG.25617 Avicennia marina HOM05D002082 ORTHO05D002130 4.5e-06 57.4 244 23.8
BcaC04g24174 Brassica carinata HOM05D002082 ORTHO05D002130 4.5e-06 57.4 184 30.4
C09p00380 Brassica napus HOM05D002082 ORTHO05D002130 4.5e-06 57.4 184 30.4
Sed0019968 Sechium edule HOM05D002082 ORTHO05D002130 4.5e-06 57.4 158 32.3
VMungo0331G0247 Vigna mungo HOM05D002082 ORTHO05D002130 4.5e-06 57.4 196 31.1


User provided reference genes

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