Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.U4L8N2 Arachis hypogaea HOM05D000051 ORTHO05D000015 1.5e-186 656.0 329 100.0
arahy.Tifrunner.gnm1.ann1.AI520R Arachis hypogaea HOM05D000051 ORTHO05D000015 3.7e-180 634.8 325 97.8
Glyma.17G194900 Glycine max HOM05D000051 ORTHO05D000015 8.7e-89 331.3 325 58.2
Glyma.13G263100 Glycine max HOM05D000051 ORTHO05D000015 1.9e-83 313.5 328 52.1
Lj1g0022871 Lotus japonicus HOM05D000051 ORTHO05D000015 9.4e-75 284.6 322 53.1
VMungo1080G0904 Vigna mungo HOM05D000051 ORTHO05D000015 1.0e-73 281.2 325 51.1
Medtr2g072720 Medicago truncatula HOM05D000051 ORTHO05D000015 1.3e-71 274.2 329 51.4
TPR.G16816 Trifolium pratense HOM05D000051 ORTHO05D000015 1.4e-65 254.2 327 50.2
TPR.G16810 Trifolium pratense HOM05D000051 ORTHO05D000015 1.8e-65 253.8 327 50.5
TPR.G16797 Trifolium pratense HOM05D000051 ORTHO05D000015 2.2e-63 246.9 328 50.3
arahy.Tifrunner.gnm1.ann1.H22LZM Arachis hypogaea HOM05D000051 ORTHO05D000015 6.3e-63 245.4 137 92.0
Medtr2g072730 Medicago truncatula HOM05D000051 ORTHO05D000015 2.2e-60 236.9 329 46.5
arahy.Tifrunner.gnm1.ann1.HYYB50 Arachis hypogaea HOM05D000051 ORTHO05D000015 6.1e-58 228.8 322 44.4
arahy.Tifrunner.gnm1.ann1.FIN1P6 Arachis hypogaea HOM05D000051 ORTHO05D000015 1.1e-54 218.0 322 44.4
Medtr4g032845 Medicago truncatula HOM05D000051 ORTHO05D000015 3.1e-54 216.5 328 43.9
arahy.Tifrunner.gnm1.ann1.NSP7CP Arachis hypogaea HOM05D000051 ORTHO05D000015 5.9e-53 212.2 335 42.4
TPR.G26409 Trifolium pratense HOM05D000051 ORTHO05D000015 1.4e-49 201.1 329 41.0
Medtr1g025870 Medicago truncatula HOM05D000051 ORTHO05D000015 3.3e-48 196.4 322 39.8
arahy.Tifrunner.gnm1.ann1.ELME12 Arachis hypogaea HOM05D002329 ORTHO05D000015 3.7e-47 193.0 137 76.6
arahy.Tifrunner.gnm1.ann1.L5GG2G Arachis hypogaea HOM05D000051 ORTHO05D000015 1.4e-46 191.0 331 41.1
Lj3g0011429 Lotus japonicus HOM05D000051 ORTHO05D000015 3.1e-46 189.9 339 41.6
Medtr6g022350 Medicago truncatula HOM05D000051 ORTHO05D000015 1.9e-43 180.6 310 40.3
Glyma.13G262900 Glycine max HOM05D000051 ORTHO05D000015 3.2e-43 179.9 327 41.6
arahy.Tifrunner.gnm1.ann1.NZKQ1I Arachis hypogaea HOM05D000051 ORTHO05D000015 2.7e-42 176.8 92 93.5
Medtr2g072710 Medicago truncatula HOM05D000051 ORTHO05D000015 6.1e-42 175.6 178 55.6
Lj2g0008890 Lotus japonicus HOM05D000051 ORTHO05D000015 1.8e-41 174.1 318 40.3
Lj2g0025192 Lotus japonicus HOM05D000051 ORTHO05D000015 9.8e-40 168.3 324 41.0
Lj2g0017050 Lotus japonicus HOM05D000051 ORTHO05D000015 3.7e-39 166.4 327 41.3
Glyma.17G193700 Glycine max HOM05D000051 ORTHO05D000015 3.1e-38 163.3 323 38.1
TPR.G7505 Trifolium pratense HOM05D000051 ORTHO05D000015 1.6e-37 161.0 323 36.8
Medtr2g072650 Medicago truncatula HOM05D000051 ORTHO05D000015 1.5e-35 154.5 238 43.7
Phvul.005G070500 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 3.3e-35 153.3 332 38.3
Medtr5g005700 Medicago truncatula HOM05D000051 ORTHO05D000015 1.8e-33 147.5 350 35.7
Glyma.13G262800 Glycine max HOM05D000051 ORTHO05D000015 5.2e-33 146.0 319 34.5
Medtr7g094030 Medicago truncatula HOM05D000051 ORTHO05D030175 2.6e-32 143.7 329 35.3
Glyma.15G242200 Glycine max HOM05D000051 ORTHO05D000015 4.4e-32 142.9 319 34.5
TPR.G4055 Trifolium pratense HOM05D000051 ORTHO05D000015 1.7e-31 141.0 315 36.5
Phvul.005G065100 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 4.9e-31 139.4 319 34.2
Glyma.15G242400 Glycine max HOM05D000051 ORTHO05D000015 3.1e-30 136.7 320 34.7
TPR.G16802 Trifolium pratense HOM05D000051 ORTHO05D000015 9.2e-30 135.2 323 33.1
arahy.Tifrunner.gnm1.ann1.GLFE0R Arachis hypogaea HOM05D000051 ORTHO05D000015 2.0e-29 134.0 305 32.8
VMungo1080G1404 Vigna mungo HOM05D000051 ORTHO05D000015 2.0e-29 134.0 307 33.6
TPR.G6826 Trifolium pratense HOM05D000051 ORTHO05D000015 1.3e-28 131.3 334 32.6
Medtr2g072530 Medicago truncatula HOM05D000051 ORTHO05D000015 1.7e-28 131.0 319 32.9
TPR.G6877 Trifolium pratense HOM05D000051 ORTHO05D000015 3.8e-28 129.8 326 32.8
TPR.G29389 Trifolium pratense HOM05D000051 ORTHO05D000015 8.6e-28 128.6 335 33.7
arahy.Tifrunner.gnm1.ann1.11NDWB Arachis hypogaea HOM05D000034 ORTHO05D000037 1.5e-27 127.9 61 98.4
Medtr2g067210 Medicago truncatula HOM05D000051 ORTHO05D000015 1.5e-27 127.9 243 37.9
Medtr5g007090 Medicago truncatula HOM05D000051 ORTHO05D000015 1.9e-27 127.5 344 34.6
Medtr8g006910 Medicago truncatula HOM05D000051 ORTHO05D000015 1.9e-27 127.5 282 37.6
Lj3g0027587 Lotus japonicus HOM05D000051 ORTHO05D000015 5.6e-27 125.9 333 32.7
Phvul.005G064900 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 1.6e-26 124.4 317 32.5
Ca_16248_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 4.7e-26 122.9 302 34.1
Lj3g0005297 Lotus japonicus HOM05D000051 ORTHO05D000015 4.7e-26 122.9 328 31.7
arahy.Tifrunner.gnm1.ann1.45LTGK Arachis hypogaea HOM05D000051 ORTHO05D000015 1.0e-25 121.7 334 31.1
TPR.G3816 Trifolium pratense HOM05D000051 ORTHO05D000015 1.4e-25 121.3 117 57.3
VMungo1080G0675 Vigna mungo HOM05D000051 ORTHO05D000015 2.3e-25 120.6 321 34.0
Lj3g0010579 Lotus japonicus HOM05D000051 ORTHO05D000015 3.1e-25 120.2 329 31.6
Lj3g0000880 Lotus japonicus HOM05D000051 ORTHO05D000015 5.2e-25 119.4 321 32.1
Lj3g0017405 Lotus japonicus HOM05D000051 ORTHO05D000015 6.8e-25 119.0 292 33.6
Medtr2g082880 Medicago truncatula HOM05D000051 ORTHO05D000015 2.0e-24 117.5 313 33.5
Lj3g0017701 Lotus japonicus HOM05D000051 ORTHO05D000015 3.4e-24 116.7 330 30.9
TPR.G15633 Trifolium pratense HOM05D000051 ORTHO05D000015 7.5e-24 115.5 317 32.5
TPR.G16809 Trifolium pratense HOM05D000051 ORTHO05D000015 2.9e-23 113.6 326 31.9
arahy.Tifrunner.gnm1.ann1.FE068N Arachis hypogaea HOM05D001651 ORTHO05D000277 2.4e-22 110.5 60 85.0
Medtr5g007110 Medicago truncatula HOM05D000051 ORTHO05D000015 3.2e-22 110.2 123 54.5
TPR.G16814 Trifolium pratense HOM05D000051 ORTHO05D000015 4.1e-22 109.8 190 41.1
arahy.Tifrunner.gnm1.ann1.Q82TWL Arachis hypogaea HOM05D001651 ORTHO05D000277 9.2e-22 108.6 57 87.7
Lj3g0014741 Lotus japonicus HOM05D000051 ORTHO05D000015 6.6e-20 102.4 332 29.2
Medtr5g007130 Medicago truncatula HOM05D000051 ORTHO05D000015 8.6e-20 102.1 318 31.8
Glyma.13G262700 Glycine max HOM05D000051 ORTHO05D000015 1.9e-19 100.9 242 33.5
Medtr1g115250 Medicago truncatula HOM05D000051 ORTHO05D000015 3.3e-19 100.1 309 34.6
Medtr3g018680 Medicago truncatula HOM05D000051 ORTHO05D000015 1.2e-18 98.2 314 31.8
Medtr7g094050 Medicago truncatula HOM05D000051 ORTHO05D000015 2.6e-16 90.5 117 47.9
Medtr2g082800 Medicago truncatula HOM05D000051 ORTHO05D000015 4.4e-16 89.7 269 35.7
Lj1A869T76 Lonicera japonica HOM05D000051 ORTHO05D000015 2.9e-15 87.0 299 29.1
Lalb_Chr03g0031401 Lupinus albus HOM05D000051 ORTHO05D000015 3.7e-15 86.7 128 43.0
Lj2g0018232 Lotus japonicus HOM05D000051 ORTHO05D000015 2.4e-14 84.0 227 35.2
Medtr2g082850 Medicago truncatula HOM05D000051 ORTHO05D000015 7.0e-14 82.4 235 33.6
Oeu007604.1 Olea europaea HOM05D000051 ORTHO05D000015 9.2e-14 82.0 265 26.4
Dinv40730 Davidia involucrata HOM05D000051 ORTHO05D000015 4.6e-13 79.7 288 27.8
Lalb_Chr03g0031411 Lupinus albus HOM05D000051 ORTHO05D000015 5.1e-12 76.3 177 32.8
Medtr6g022330 Medicago truncatula HOM05D008874 ORTHO05D012000 6.6e-12 75.9 182 34.6
Thhalv10022020m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.1e-11 75.1 320 26.9
Rhsim04G0001300 Rhododendron simsii HOM05D000051 ORTHO05D000015 4.3e-11 73.2 265 25.3
QL05p074475 Quercus lobata HOM05D000051 ORTHO05D000015 1.2e-10 71.6 301 24.6
FvH4_2g37070 Fragaria vesca HOM05D000051 ORTHO05D000015 1.1e-09 68.6 292 27.1
Sopen07g032410 Solanum pennellii HOM05D000051 ORTHO05D000015 4.0e-09 66.6 283 25.1
vmacro11751 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 4.0e-09 66.6 314 26.8
Medtr7g023310 Medicago truncatula HOM05D000051 ORTHO05D000015 6.8e-09 65.9 273 26.4
AT3G14710 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.5e-08 64.7 330 28.5
CARHR089650 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.5e-08 64.7 278 27.3
Duzib213G0041 Durio zibethinus HOM05D000051 ORTHO05D000015 2.6e-08 63.9 285 28.8
Cpa.g.sc1313.2 Carica papaya HOM05D000051 ORTHO05D000015 3.4e-08 63.5 327 25.4
Medtr4g080590 Medicago truncatula HOM05D000051 ORTHO05D000015 3.4e-08 63.5 266 26.7
QL01p041814 Quercus lobata HOM05D000051 ORTHO05D000015 3.4e-08 63.5 278 25.9
QL01p041819 Quercus lobata HOM05D000051 ORTHO05D000015 3.4e-08 63.5 291 27.5
Psat3g099840 Pisum sativum HOM05D039137 ORTHO05D030175 4.4e-08 63.2 178 32.0
QL08p010781 Quercus lobata HOM05D000051 ORTHO05D000015 4.4e-08 63.2 311 25.4
Aa31LG8G1930 Aethionema arabicum HOM05D003241 ORTHO05D000015 5.8e-08 62.8 278 26.3
DCAR_022537 Daucus carota HOM05D000051 ORTHO05D000015 5.8e-08 62.8 282 23.8
PGSC0003DMG401001040 Solanum tuberosum HOM05D000051 ORTHO05D000015 7.5e-08 62.4 284 23.9
TPR.G7205 Trifolium pratense HOM05D000051 ORTHO05D000015 9.9e-08 62.0 76 43.4
Lsat_1_v5_gn_7_109361 Lactuca sativa HOM05D000051 ORTHO05D000015 1.3e-07 61.6 302 25.8
Medtr5g092960 Medicago truncatula HOM05D000051 ORTHO05D000015 2.9e-07 60.5 271 27.3
Psat5g251720 Pisum sativum HOM05D000051 ORTHO05D000015 2.9e-07 60.5 151 37.1
Medtr8g468840 Medicago truncatula HOM05D000051 ORTHO05D000015 3.7e-07 60.1 323 26.0
Psat3g100000 Pisum sativum HOM05D039137 ORTHO05D030175 3.7e-07 60.1 150 30.7
QL08p011216 Quercus lobata HOM05D000051 ORTHO05D000015 3.7e-07 60.1 270 26.3
TPR.G25974 Trifolium pratense HOM05D000051 ORTHO05D000015 3.7e-07 60.1 314 25.2
Cc11_g01210 Coffea canephora HOM05D000051 ORTHO05D000015 4.9e-07 59.7 231 25.5
Ciclev10019792m.g Citrus clementina HOM05D000051 ORTHO05D000015 6.4e-07 59.3 345 24.3
Hma1.2p1_1609F.1_g293440 Hydrangea macrophylla HOM05D000051 ORTHO05D000015 6.4e-07 59.3 277 23.8
Medtr5g006480 Medicago truncatula HOM05D000051 ORTHO05D000015 6.4e-07 59.3 72 51.4
AL3G27020 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 8.3e-07 58.9 319 27.0
vmacro11759 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 8.3e-07 58.9 147 29.9
Dinv17490 Davidia involucrata HOM05D000051 ORTHO05D000015 1.1e-06 58.5 278 26.6
Migut.M01792 Erythranthe guttata HOM05D000051 ORTHO05D000015 1.1e-06 58.5 277 23.5
Medtr2g072550 Medicago truncatula HOM05D000051 ORTHO05D000015 1.4e-06 58.2 124 33.1
arahy.Tifrunner.gnm1.ann1.073NYH Arachis hypogaea HOM05D000034 ORTHO05D085602 1.9e-06 57.8 29 93.1
Hma1.2p1_2457F.1_g322490 Hydrangea macrophylla HOM05D000051 ORTHO05D000015 1.9e-06 57.8 328 24.1
Psat1g008320 Pisum sativum HOM05D000051 ORTHO05D000015 2.4e-06 57.4 181 29.8
Actinidia15955 Actinidia chinensis HOM05D000051 ORTHO05D000015 3.2e-06 57.0 293 24.9
CARHR204270 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.2e-06 57.0 292 24.7
vmacro11750 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 3.2e-06 57.0 310 25.8
C05p11640 Brassica napus HOM05D000051 ORTHO05D000015 5.4e-06 56.2 322 23.3
BolC5t29911H Brassica oleracea HOM05D000051 ORTHO05D000015 5.4e-06 56.2 322 23.3
Aqoxy4G01151 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 9.2e-06 55.5 304 23.4
Lalb_Chr03g0040371 Lupinus albus HOM05D000576 ORTHO05D000368 9.2e-06 55.5 130 30.0


User provided reference genes

Program Settings