Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 3.7e-117 424.9 209 100.0
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 1.8e-116 422.5 208 99.5
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 1.0e-98 363.6 208 85.6
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 2.2e-98 362.5 208 84.1
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 8.5e-98 360.5 208 83.2
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 1.1e-97 360.1 208 83.2
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 2.8e-93 345.5 208 81.2
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 2.4e-92 342.4 195 84.1
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 3.1e-92 342.0 208 80.3
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 7.0e-92 340.9 211 78.2
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 7.7e-91 337.4 211 77.3
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 7.7e-91 337.4 208 78.4
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.7e-90 336.3 210 78.1
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 1.7e-90 336.3 214 76.2
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.1e-89 333.6 204 79.4
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.9e-89 332.8 210 77.1
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 1.9e-89 332.8 210 77.6
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 2.5e-89 332.4 209 78.5
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.2e-89 332.0 210 77.1
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 3.2e-89 332.0 203 79.3
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 4.2e-89 331.6 210 75.7
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 7.2e-89 330.9 210 76.7
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 9.4e-89 330.5 210 76.7
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 4.7e-88 328.2 210 76.7
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 8.0e-88 327.4 210 76.2
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 1.4e-87 326.6 208 76.4
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 6.8e-87 324.3 209 74.6
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 1.2e-86 323.6 213 73.7
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.2e-86 323.6 214 75.2
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 1.5e-86 323.2 207 75.4
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 1.5e-86 323.2 210 75.2
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.4e-86 321.6 214 74.8
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 4.4e-86 321.6 208 76.0
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 5.7e-86 321.2 204 75.5
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 5.7e-86 321.2 208 76.4
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 1.7e-85 319.7 213 74.2
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 1.7e-85 319.7 216 73.6
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 2.8e-85 318.9 207 74.4
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 2.8e-85 318.9 208 71.6
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 3.7e-85 318.5 207 75.4
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 8.3e-85 317.4 206 74.3
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 8.3e-85 317.4 193 80.8
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 1.4e-84 316.6 209 73.7
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 2.4e-84 315.8 207 72.9
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 2.4e-84 315.8 210 74.8
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 2.0e-83 312.8 208 73.6
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 4.5e-83 311.6 210 72.4
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.3e-82 310.1 205 73.7
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 2.9e-82 308.9 217 70.0
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 3.8e-82 308.5 210 71.0
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 3.8e-82 308.5 207 72.0
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 5.0e-82 308.1 201 75.1
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 5.0e-82 308.1 207 72.5
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 6.6e-82 307.8 207 72.9
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.5e-81 306.6 203 74.4
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.5e-81 305.8 207 72.0
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 3.3e-81 305.4 203 73.9
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 3.3e-81 305.4 211 71.6
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 7.2e-81 304.3 277 58.8
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 3.6e-80 302.0 208 70.2
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 8.0e-80 300.8 193 74.1
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 5.2e-79 298.1 203 72.9
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 6.8e-79 297.7 212 71.2
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 1.5e-78 296.6 184 75.0
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 2.6e-78 295.8 208 68.8
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 1.3e-77 293.5 211 66.8
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 1.7e-77 293.1 208 68.3
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.8e-77 292.4 219 68.5
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 3.7e-77 292.0 210 68.1
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 4.9e-77 291.6 174 80.5
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 8.3e-77 290.8 205 69.3
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 8.3e-77 290.8 210 67.6
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 1.2e-75 287.0 195 71.8
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 2.0e-75 286.2 210 67.6
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 2.7e-75 285.8 193 71.5
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 2.7e-75 285.8 205 68.8
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 5.9e-75 284.6 204 68.6
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 5.9e-75 284.6 205 68.3
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 7.8e-75 284.3 210 66.7
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 1.7e-74 283.1 207 67.1
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 1.7e-74 283.1 193 69.4
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 2.3e-74 282.7 198 68.2
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 8.6e-74 280.8 205 67.3
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 1.5e-73 280.0 209 67.9
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 3.3e-73 278.9 184 74.5
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.6e-72 276.6 208 66.3
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 2.1e-72 276.2 207 64.3
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 3.6e-72 275.4 198 64.1
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 3.6e-72 275.4 199 66.8
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 1.8e-71 273.1 208 65.9
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 4.0e-71 271.9 193 67.4
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 1.5e-70 270.0 208 65.9
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 2.0e-70 269.6 209 65.1
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 2.0e-70 269.6 209 65.1
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 2.0e-70 269.6 209 65.1
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 2.6e-70 269.2 211 64.0
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 7.5e-70 267.7 208 62.5
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 2.2e-69 266.2 171 74.9
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 3.7e-69 265.4 211 63.0
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 3.7e-69 265.4 211 63.0
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 3.7e-69 265.4 171 74.9
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 4.1e-68 261.9 171 72.5
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 5.4e-68 261.5 193 65.3
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 2.3e-66 256.1 210 61.9
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.2e-64 250.4 203 63.5
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 1.3e-61 240.4 173 68.8
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 3.5e-59 232.3 171 64.3
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 2.6e-54 216.1 189 56.1
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.2e-53 213.0 131 78.6
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 3.7e-53 212.2 197 54.8
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 1.1e-52 210.7 193 54.4
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.4e-52 210.3 237 54.0
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 9.2e-52 207.6 194 52.6
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 3.0e-50 202.6 114 84.2
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 8.6e-50 201.1 198 49.5
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 8.4e-45 184.5 120 73.3
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 7.1e-44 181.4 214 45.8
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.1e-28 131.0 83 73.5
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 2.4e-28 129.8 83 69.9
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 4.2e-20 102.4 186 37.1
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 3.0e-18 96.3 239 32.2
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 2.8e-16 89.7 80 57.5
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 2.8e-16 89.7 49 85.7
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 1.2e-14 84.3 178 32.0
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 3.8e-13 79.3 49 73.5
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 2.5e-12 76.6 159 32.7


User provided reference genes

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