Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.TR1UXP Arachis hypogaea HOM05D003721 ORTHO05D004303 6.1e-26 120.2 66 100.0
arahy.Tifrunner.gnm1.ann1.2H8IEQ Arachis hypogaea HOM05D003721 ORTHO05D004303 9.8e-24 112.8 66 95.5
arahy.Tifrunner.gnm1.ann1.B4ZXCR Arachis hypogaea HOM05D003721 ORTHO05D004303 1.3e-23 112.5 66 93.9
arahy.Tifrunner.gnm1.ann1.J8U9TP Arachis hypogaea HOM05D003721 ORTHO05D004303 6.3e-23 110.2 66 93.9
arahy.Tifrunner.gnm1.ann1.4H30G8 Arachis hypogaea HOM05D003721 ORTHO05D004303 8.3e-23 109.8 66 92.4
arahy.Tifrunner.gnm1.ann1.X01UQ7 Arachis hypogaea HOM05D003721 ORTHO05D004303 1.4e-22 109.0 66 92.4
arahy.Tifrunner.gnm1.ann1.EAH0NM Arachis hypogaea HOM05D003721 ORTHO05D004303 2.4e-22 108.2 66 89.4
arahy.Tifrunner.gnm1.ann1.0WEA7F Arachis hypogaea HOM05D003721 ORTHO05D004303 9.1e-22 106.3 66 90.9
arahy.Tifrunner.gnm1.ann1.BE33XR Arachis hypogaea HOM05D003721 ORTHO05D004303 9.1e-22 106.3 61 96.7
Glyma.18G239200 Glycine max HOM05D003721 ORTHO05D004303 6.3e-15 83.6 68 73.5
Glyma.09G253700 Glycine max HOM05D003721 ORTHO05D004303 1.8e-14 82.0 66 71.2
Psat3g105680 Pisum sativum HOM05D003721 ORTHO05D004303 1.8e-14 82.0 68 73.5
VMungo1383G3272 Vigna mungo HOM05D003721 ORTHO05D004303 1.8e-14 82.0 66 69.7
arahy.Tifrunner.gnm1.ann1.QXLJ4L Arachis hypogaea HOM05D003721 ORTHO05D004303 1.0e-12 76.3 67 68.7
Phvul.008G057500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 2.9e-12 74.7 66 65.2
arahy.Tifrunner.gnm1.ann1.N4BQ9I Arachis hypogaea HOM05D003721 ORTHO05D004303 5.0e-12 73.9 43 88.4
arahy.Tifrunner.gnm1.ann1.M56506 Arachis hypogaea HOM05D003721 ORTHO05D004303 1.5e-11 72.4 64 67.2
Glyma.07G062500 Glycine max HOM05D003721 ORTHO05D004303 1.9e-11 72.0 54 72.2
Ca_07946_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 5.6e-11 70.5 68 66.2
Duzib133G0509 Durio zibethinus HOM05D003721 ORTHO05D004303 1.6e-10 68.9 68 58.8
Glyma.16G030600 Glycine max HOM05D003721 ORTHO05D004303 2.1e-10 68.6 54 68.5
CSS0042065 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 4.7e-10 67.4 68 61.8
Ca_03491_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 1.0e-09 66.2 66 57.6
Medtr7g079200 Medicago truncatula HOM05D003721 ORTHO05D004303 1.0e-09 66.2 68 61.8
VMungo0331G1476 Vigna mungo HOM05D003721 ORTHO05D004303 1.4e-09 65.9 54 64.8
Lj1g0019249 Lotus japonicus HOM05D003721 ORTHO05D004303 2.3e-09 65.1 68 63.2
Phvul.010G105500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 4.0e-09 64.3 54 63.0
Dinv43871 Davidia involucrata HOM05D003721 ORTHO05D004303 1.2e-08 62.8 68 58.8
MD07G1130300 Malus domestica HOM05D003721 ORTHO05D004303 2.6e-08 61.6 66 54.5
QL04p055909 Quercus lobata HOM05D003721 ORTHO05D004303 2.6e-08 61.6 65 56.9
Gohir.D11G097866 Gossypium hirsutum HOM05D003721 ORTHO05D004303 3.4e-08 61.2 68 51.5
Gorai.007G104100 Gossypium raimondii HOM05D003721 ORTHO05D004303 3.4e-08 61.2 68 51.5
COL.COLO4_06374 Corchorus olitorius HOM05D003721 ORTHO05D004303 5.8e-08 60.5 68 54.4
Potri.002G165500 Populus trichocarpa HOM05D003721 ORTHO05D004303 5.8e-08 60.5 68 54.4
Cfa003861 Carpinus fangiana HOM05D003721 ORTHO05D004303 7.5e-08 60.1 65 56.9
Ciclev10018933m.g Citrus clementina HOM05D003721 ORTHO05D004303 7.5e-08 60.1 68 51.5
Dinv32529 Davidia involucrata HOM05D003721 ORTHO05D004303 1.7e-07 58.9 68 54.4
Thecc.01G351200 Theobroma cacao HOM05D003721 ORTHO05D004303 1.7e-07 58.9 68 51.5
Sabra02G0146000 Salix brachista HOM05D003721 ORTHO05D004303 2.2e-07 58.5 67 52.2
vmacro13221 Vaccinium macrocarpon HOM05D003721 ORTHO05D004303 2.2e-07 58.5 68 52.9
MD01G1072600 Malus domestica HOM05D003721 ORTHO05D004303 3.7e-07 57.8 66 51.5
Potri.014G091300 Populus trichocarpa HOM05D003721 ORTHO05D004303 3.7e-07 57.8 68 51.5
Haze_15575 Corylus avellana HOM05D003721 ORTHO05D004303 4.9e-07 57.4 66 53.0
Nn1g01721 Nelumbo nucifera HOM05D003721 ORTHO05D004303 4.9e-07 57.4 68 51.5
Haze_15580 Corylus avellana HOM05D003721 ORTHO05D004303 6.4e-07 57.0 66 53.0
GSVIVG01027009001 Vitis vinifera HOM05D003721 ORTHO05D004303 1.1e-06 56.2 68 51.5
Lalb_Chr17g0338961 Lupinus albus HOM05D003721 ORTHO05D004303 1.9e-06 55.5 66 51.5
Rhsim07G0009400 Rhododendron simsii HOM05D003721 ORTHO05D004303 1.9e-06 55.5 68 54.4
Actinidia37723 Actinidia chinensis HOM05D003721 ORTHO05D004303 2.4e-06 55.1 56 57.1
Manes.07G084500 Manihot esculenta HOM05D003721 ORTHO05D004303 3.2e-06 54.7 67 52.2
Lj7A506T70 Lonicera japonica HOM05D003721 ORTHO05D004303 4.1e-06 54.3 68 50.0
Sabra14G0066200 Salix brachista HOM05D003721 ORTHO05D004303 4.1e-06 54.3 68 50.0
TPR.G29569 Trifolium pratense HOM05D003721 ORTHO05D004303 4.1e-06 54.3 68 55.9
Hma1.2p1_0623F.1_g191170 Hydrangea macrophylla HOM05D003721 ORTHO05D004303 5.4e-06 53.9 68 50.0
Atru.chr5.592 Acer truncatum HOM05D003721 ORTHO05D004303 7.0e-06 53.5 68 48.5
CSS0014201 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 7.0e-06 53.5 66 53.0
CSS0038344 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 7.0e-06 53.5 66 53.0


User provided reference genes

Program Settings