Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 2.2e-35 151.8 76 100.0
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 2.2e-35 151.8 76 100.0
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 4.3e-31 137.5 73 93.2
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 4.3e-31 137.5 73 93.2
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 4.3e-31 137.5 73 93.2
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 4.6e-25 117.5 73 75.3
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 5.0e-24 114.0 73 71.2
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 8.6e-24 113.2 67 80.6
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 1.5e-23 112.5 74 75.7
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 4.3e-23 110.9 74 74.3
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 5.6e-23 110.5 73 71.2
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 2.8e-22 108.2 73 68.5
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 5.2e-21 104.0 73 67.1
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 1.7e-19 99.0 73 68.5
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 8.3e-19 96.7 67 73.1
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 3.2e-18 94.7 72 65.3
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 3.2e-18 94.7 72 65.3
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 3.2e-18 94.7 72 65.3
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 5.4e-18 94.0 67 68.7
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 9.2e-18 93.2 67 67.2
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 1.2e-17 92.8 73 60.3
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.6e-17 92.4 67 65.7
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 2.1e-17 92.0 67 65.7
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 2.1e-17 92.0 73 60.3
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 3.5e-17 91.3 73 64.4
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 4.6e-17 90.9 66 65.2
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 6.0e-17 90.5 67 67.2
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 6.0e-17 90.5 67 67.2
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 7.8e-17 90.1 72 62.5
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 1.0e-16 89.7 67 68.7
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 1.0e-16 89.7 72 59.7
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 1.3e-16 89.4 72 62.5
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 1.3e-16 89.4 67 64.2
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 1.7e-16 89.0 66 66.7
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 1.7e-16 89.0 74 64.9
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 2.3e-16 88.6 67 64.2
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 3.0e-16 88.2 74 56.8
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 3.0e-16 88.2 74 56.8
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 3.0e-16 88.2 66 63.6
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 3.9e-16 87.8 66 65.2
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 3.9e-16 87.8 67 64.2
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 6.6e-16 87.0 70 58.6
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 6.6e-16 87.0 67 62.7
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 8.6e-16 86.7 67 62.7
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.1e-15 86.3 72 56.9
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 1.1e-15 86.3 68 69.1
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 1.5e-15 85.9 71 62.0
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.9e-15 85.5 68 64.7
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 1.9e-15 85.5 74 60.8
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.9e-15 85.5 72 59.7
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 1.9e-15 85.5 67 64.2
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 2.5e-15 85.1 66 60.6
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 2.5e-15 85.1 67 62.7
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.5e-15 85.1 68 64.7
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 2.5e-15 85.1 72 61.1
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 3.3e-15 84.7 66 60.6
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 4.3e-15 84.3 72 59.7
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 4.3e-15 84.3 71 57.7
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 4.3e-15 84.3 71 57.7
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 4.3e-15 84.3 72 55.6
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 4.3e-15 84.3 72 59.7
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 5.6e-15 84.0 68 63.2
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 9.5e-15 83.2 67 64.2
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 9.5e-15 83.2 70 57.1
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 1.2e-14 82.8 66 59.1
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 1.2e-14 82.8 72 58.3
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 1.2e-14 82.8 73 58.9
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 1.6e-14 82.4 67 61.2
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 1.6e-14 82.4 73 58.9
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 1.6e-14 82.4 70 55.7
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 2.1e-14 82.0 66 59.1
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 2.1e-14 82.0 73 53.4
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 1.4e-13 79.3 67 62.7
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 1.4e-13 79.3 67 58.2
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.4e-13 79.3 77 55.8
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 1.8e-13 79.0 71 57.7
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 3.1e-13 78.2 70 55.7
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 8.9e-13 76.6 73 57.5
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 2.6e-12 75.1 73 54.8
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 5.8e-12 73.9 67 52.2
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 7.6e-12 73.6 52 73.1
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 9.9e-12 73.2 73 53.4
arahy.Tifrunner.gnm1.ann1.9CXT3Z Arachis hypogaea HOM05D035740 ORTHO05D082897 3.8e-11 71.2 41 85.4
arahy.Tifrunner.gnm1.ann1.C9SE0R Arachis hypogaea HOM05D035740 ORTHO05D086213 3.8e-11 71.2 41 85.4
arahy.Tifrunner.gnm1.ann1.CEJV2N Arachis hypogaea HOM05D035740 ORTHO05D082514 3.8e-11 71.2 41 85.4
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 6.4e-11 70.5 66 48.5
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 3.2e-10 68.2 47 72.3
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 1.6e-09 65.9 67 52.2
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 1.6e-09 65.9 67 52.2
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 2.8e-06 55.1 53 45.3
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 2.8e-06 55.1 49 57.1


User provided reference genes

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