Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.TPLS1U Arachis hypogaea HOM05D004793 ORTHO05D004423 4.3e-78 294.7 156 100.0
arahy.Tifrunner.gnm1.ann1.QXLV0V Arachis hypogaea HOM05D004793 ORTHO05D004423 4.0e-76 288.1 156 97.4
Psat4g002280 Pisum sativum HOM05D004793 ORTHO05D004423 4.2e-17 92.0 154 46.8
TPR.G6007 Trifolium pratense HOM05D004793 ORTHO05D004423 9.4e-17 90.9 161 44.1
TPR.G10593 Trifolium pratense HOM05D004793 ORTHO05D004423 1.6e-16 90.1 157 46.5
Medtr4g133720 Medicago truncatula HOM05D004793 ORTHO05D004423 4.7e-16 88.6 168 42.9
Medtr2g026510 Medicago truncatula HOM05D004793 ORTHO05D004423 6.1e-16 88.2 157 45.2
Lalb_Chr15g0088081 Lupinus albus HOM05D004793 ORTHO05D004423 8.0e-16 87.8 162 46.3
Psat1g178240 Pisum sativum HOM05D004793 ORTHO05D004423 8.8e-15 84.3 160 42.5
Lj6g0021600 Lotus japonicus HOM05D004793 ORTHO05D004423 5.7e-14 81.6 156 41.7
Glyma.15G116700 Glycine max HOM05D004793 ORTHO05D004423 1.7e-13 80.1 152 44.1
Glyma.17G007500 Glycine max HOM05D004793 ORTHO05D004423 2.2e-13 79.7 160 42.5
QL05p068872 Quercus lobata HOM05D004793 ORTHO05D004423 1.1e-12 77.4 154 39.6
Phvul.006G141500 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 1.4e-12 77.0 152 44.1
Glyma.09G012000 Glycine max HOM05D004793 ORTHO05D004423 2.4e-12 76.3 152 42.8
Glyma.07G266600 Glycine max HOM05D004793 ORTHO05D004423 3.1e-12 75.9 157 42.7
VMungo0540G1724 Vigna mungo HOM05D004793 ORTHO05D004423 3.1e-12 75.9 152 43.4
QL05p068371 Quercus lobata HOM05D004793 ORTHO05D004423 5.3e-12 75.1 155 40.0
Lj4g0015289 Lotus japonicus HOM05D004793 ORTHO05D004423 7.0e-12 74.7 163 38.7
Sabra16G0013200 Salix brachista HOM05D004793 ORTHO05D004423 7.0e-12 74.7 158 39.2
CANSAT56G2188 Cannabis sativa HOM05D004793 ORTHO05D004423 9.1e-12 74.3 161 38.5
Potri.016G009200 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.0e-10 70.9 156 37.2
Potri.006G016500 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.3e-10 70.5 157 38.9
Prupe.4G007200 Prunus persica HOM05D004793 ORTHO05D004423 2.9e-10 69.3 161 36.6
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 8.5e-10 67.8 155 38.7
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 1.9e-09 66.6 154 38.3
Sabra06G0011800 Salix brachista HOM05D004793 ORTHO05D004423 2.5e-09 66.2 157 36.9
Phvul.003G085100 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 4.2e-09 65.5 160 40.0
RcHm_v2.0_Chr5g0000811 Rosa chinensis HOM05D020126 ORTHO05D004423 4.2e-09 65.5 165 35.8
PGR004G1083 Punica granatum HOM05D004793 ORTHO05D004423 7.2e-09 64.7 102 46.1
Eucgr.D01438 Eucalyptus grandis HOM05D004793 ORTHO05D004423 1.2e-08 63.9 107 41.1
Rhsim13G0143200 Rhododendron simsii HOM05D004793 ORTHO05D004423 2.7e-08 62.8 106 38.7
CiPaw.09G105400 Carya illinoinensis HOM05D004793 ORTHO05D004423 3.6e-08 62.4 104 44.2
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 4.7e-08 62.0 110 40.0
Sed0019930 Sechium edule HOM05D028401 ORTHO05D004423 1.8e-07 60.1 167 35.3
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 2.3e-07 59.7 85 49.4
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 3.0e-07 59.3 72 45.8
VMungo1215G0069 Vigna mungo HOM05D004793 ORTHO05D004423 3.0e-07 59.3 160 35.0
Gohir.D06G161500 Gossypium hirsutum HOM05D004793 ORTHO05D004423 4.0e-07 58.9 167 36.5
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 5.2e-07 58.5 85 49.4
arahy.Tifrunner.gnm1.ann1.I085MR Arachis hypogaea HOM05D004793 ORTHO05D038859 8.8e-07 57.8 165 37.0
Gorai.010G188500 Gossypium raimondii HOM05D004793 ORTHO05D004423 8.8e-07 57.8 85 49.4
Lsat_1_v5_gn_7_13860 Lactuca sativa HOM05D004793 ORTHO05D004423 8.8e-07 57.8 102 42.2
DCAR_030858 Daucus carota HOM05D004793 ORTHO05D004423 1.2e-06 57.4 101 41.6
RcHm_v2.0_Chr5g0000821 Rosa chinensis HOM05D020126 ORTHO05D004423 1.2e-06 57.4 181 32.0
GSVIVG01002881001 Vitis vinifera HOM05D000222 ORTHO05D003997 1.2e-06 57.4 77 50.6
CAN.G696.14 Capsicum annuum HOM05D018828 ORTHO05D004423 4.4e-06 55.5 118 40.7
Cpa.g.sc2750.2 Carica papaya HOM05D004793 ORTHO05D004423 4.4e-06 55.5 69 50.7
CiPaw.11G201300 Carya illinoinensis HOM05D004793 ORTHO05D004423 4.4e-06 55.5 77 45.5
CSS0021588 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 5.7e-06 55.1 53 56.6
Aqoxy1G04226 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 7.5e-06 54.7 118 34.7
CSS0022938 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 7.5e-06 54.7 155 35.5
FvH4_3g00600 Fragaria vesca HOM05D020126 ORTHO05D004423 7.5e-06 54.7 166 34.3
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 7.5e-06 54.7 84 46.4
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 7.5e-06 54.7 59 54.2
Prupe.4G234900 Prunus persica HOM05D004793 ORTHO05D004423 7.5e-06 54.7 158 38.0
MSTRG.7149 Avicennia marina HOM05D004793 ORTHO05D004423 9.7e-06 54.3 155 32.3
Ciclev10017072m.g Citrus clementina HOM05D004793 ORTHO05D004423 9.7e-06 54.3 105 44.8
FAN21G2945 Fragaria x ananassa HOM05D020126 ORTHO05D004423 9.7e-06 54.3 169 33.7
Gohir.A06G155000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 9.7e-06 54.3 167 34.7


User provided reference genes

Program Settings