Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.E2537D Arachis hypogaea HOM05D019151 ORTHO05D005473 4.4e-280 967.2 460 100.0
arahy.Tifrunner.gnm1.ann1.TG6NMP Arachis hypogaea HOM05D019151 ORTHO05D005473 4.4e-280 967.2 460 100.0
arahy.Tifrunner.gnm1.ann1.49FNXS Arachis hypogaea HOM05D019151 ORTHO05D086150 8.3e-138 494.6 417 63.1
arahy.Tifrunner.gnm1.ann1.Y7SRIQ Arachis hypogaea HOM05D019151 ORTHO05D082672 8.3e-138 494.6 417 63.1
arahy.Tifrunner.gnm1.ann1.KR1J1K Arachis hypogaea HOM05D019151 ORTHO05D085899 2.0e-59 234.2 269 48.7
arahy.Tifrunner.gnm1.ann1.L2RIB4 Arachis hypogaea HOM05D019151 ORTHO05D083511 4.1e-44 183.3 218 50.0
arahy.Tifrunner.gnm1.ann1.3T4916 Arachis hypogaea HOM05D056565 ORTHO05D084914 1.6e-43 181.4 396 35.1
arahy.Tifrunner.gnm1.ann1.NT4GU8 Arachis hypogaea HOM05D056565 ORTHO05D086277 8.9e-39 165.6 396 33.3
arahy.Tifrunner.gnm1.ann1.7R1Z85 Arachis hypogaea HOM05D019977 ORTHO05D084385 2.0e-22 111.3 359 27.9
arahy.Tifrunner.gnm1.ann1.L677I4 Arachis hypogaea HOM05D004449 ORTHO05D005473 2.0e-22 111.3 58 91.4
arahy.Tifrunner.gnm1.ann1.1FC84E Arachis hypogaea HOM05D004449 ORTHO05D005473 2.6e-22 110.9 57 93.0
arahy.Tifrunner.gnm1.ann1.IMVN0M Arachis hypogaea HOM05D004449 ORTHO05D005473 2.6e-22 110.9 57 93.0
arahy.Tifrunner.gnm1.ann1.H91IF8 Arachis hypogaea HOM05D004449 ORTHO05D005473 1.3e-21 108.6 57 91.2
Eucgr.A02663 Eucalyptus grandis HOM05D004449 ORTHO05D005473 5.4e-20 103.2 108 52.8
arahy.Tifrunner.gnm1.ann1.NNX6TU Arachis hypogaea HOM05D019977 ORTHO05D086120 1.6e-19 101.7 368 25.8
vmacro04352 Vaccinium macrocarpon HOM05D004449 ORTHO05D005473 2.7e-19 100.9 61 75.4
Medtr2g015010 Medicago truncatula HOM05D004449 ORTHO05D005473 4.6e-19 100.1 57 78.9
Rhsim07G0247400 Rhododendron simsii HOM05D004449 ORTHO05D005473 6.0e-19 99.8 55 85.5
Actinidia05427 Actinidia chinensis HOM05D004449 ORTHO05D005473 7.8e-19 99.4 55 83.6
A05p09610 Brassica napus HOM05D004449 ORTHO05D005473 1.0e-18 99.0 91 58.2
QL07p038716 Quercus lobata HOM05D004449 ORTHO05D005473 1.0e-18 99.0 108 51.9
QL07p038966 Quercus lobata HOM05D004449 ORTHO05D005473 1.0e-18 99.0 108 51.9
vmacro21413 Vaccinium macrocarpon HOM05D004449 ORTHO05D005473 1.3e-18 98.6 55 83.6
RhsimUnG0066300 Rhododendron simsii HOM05D004449 ORTHO05D005473 2.3e-18 97.8 55 83.6
BcaB02g09374 Brassica carinata HOM05D004449 ORTHO05D005473 3.0e-18 97.4 89 58.4
BraA05t19914Z Brassica rapa HOM05D004449 ORTHO05D005473 3.0e-18 97.4 91 57.1
Hma1.2p1_0084F.1_g043840 Hydrangea macrophylla HOM05D004449 ORTHO05D005473 3.0e-18 97.4 108 50.9
Hma1.2p1_0820F.1_g223850 Hydrangea macrophylla HOM05D004449 ORTHO05D005473 3.0e-18 97.4 108 50.9
Thhalv10016966m.g Eutrema salsugineum HOM05D004449 ORTHO05D005473 3.9e-18 97.1 91 56.0
Lsat_1_v5_gn_8_77140 Lactuca sativa HOM05D004449 ORTHO05D005473 3.9e-18 97.1 55 81.8
Oeu056880.1 Olea europaea HOM05D004449 ORTHO05D005473 3.9e-18 97.1 108 50.0
TPR.G11735 Trifolium pratense HOM05D004449 ORTHO05D005473 3.9e-18 97.1 57 77.2
TWI74G1045 Tripterygium wilfordii HOM05D004449 ORTHO05D005473 3.9e-18 97.1 108 52.8
Ca_00406_v3 Cicer arietinum L. HOM05D004449 ORTHO05D005473 5.0e-18 96.7 57 77.2
Nitab4.5_0006507g0050 Nicotiana tabacum HOM05D004449 ORTHO05D005473 5.0e-18 96.7 53 83.0
PGR042G0526 Punica granatum HOM05D004449 ORTHO05D005473 5.0e-18 96.7 110 50.0
MELO3C022184.2 Cucumis melo HOM05D004449 ORTHO05D005473 6.6e-18 96.3 57 80.7
Lalb_Chr06g0172241 Lupinus albus HOM05D004449 ORTHO05D005473 6.6e-18 96.3 57 78.9
Lalb_Chr06g0172381 Lupinus albus HOM05D004449 ORTHO05D005473 6.6e-18 96.3 57 78.9
CSS0045328 Camellia sinensis var. sinensis HOM05D004449 ORTHO05D005473 8.6e-18 95.9 55 81.8
Phvul.009G260700 Phaseolus vulgaris HOM05D004449 ORTHO05D005473 8.6e-18 95.9 57 80.7
Glyma.02G054800 Glycine max HOM05D004449 ORTHO05D005473 1.1e-17 95.5 57 77.2
VMungo1309G2207 Vigna mungo HOM05D004449 ORTHO05D005473 1.1e-17 95.5 57 78.9
Migut.J01033 Erythranthe guttata HOM05D004449 ORTHO05D005473 1.5e-17 95.1 55 83.6
SGA_v2.0_scaffold75G24747 Striga asiatica HOM05D004449 ORTHO05D005473 1.5e-17 95.1 108 50.0
THA.LOC104804908 Tarenaya hassleriana HOM05D004449 ORTHO05D005473 1.5e-17 95.1 56 80.4
ECA248G0038 Erigeron canadensis HOM05D004449 ORTHO05D005473 1.9e-17 94.7 55 78.2
Carub.0004s1799 Capsella rubella HOM05D004449 ORTHO05D005473 2.5e-17 94.4 88 56.8
ClCG08G005200 Citrullus lanatus HOM05D004449 ORTHO05D005473 2.5e-17 94.4 56 80.4
DCAR_006449 Daucus carota HOM05D004449 ORTHO05D005473 2.5e-17 94.4 55 80.0
MBI17_g08343_MAGBIO Magnolia biondii HOM05D004449 ORTHO05D005473 2.5e-17 94.4 90 55.6
Nitab4.5_0000582g0210 Nicotiana tabacum HOM05D004449 ORTHO05D005473 2.5e-17 94.4 88 56.8
TAR369G0358 Trochodendron aralioides HOM05D003904 ORTHO05D004378 2.5e-17 94.4 55 78.2
AT2G36230 Arabidopsis thaliana HOM05D004449 ORTHO05D005473 3.3e-17 94.0 90 55.6
Ciclev10012240m.g Citrus clementina HOM05D004449 ORTHO05D005473 3.3e-17 94.0 55 78.2
MD12G1036500 Malus domestica HOM05D004449 ORTHO05D005473 3.3e-17 94.0 55 78.2
MD14G1023300 Malus domestica HOM05D004449 ORTHO05D005473 3.3e-17 94.0 55 78.2
BcaB01g03853 Brassica carinata HOM05D004449 ORTHO05D005473 4.3e-17 93.6 89 55.1
CARHR130470 Cardamine hirsuta HOM05D004449 ORTHO05D005473 4.3e-17 93.6 94 53.2
CiPaw.09G014500 Carya illinoinensis HOM05D004449 ORTHO05D005473 4.3e-17 93.6 90 56.7
FvH4_6g18790 Fragaria vesca HOM05D004449 ORTHO05D005473 4.3e-17 93.6 56 76.8
FAN14G0980 Fragaria x ananassa HOM05D004449 ORTHO05D005473 4.3e-17 93.6 56 76.8
Potri.004G090500 Populus trichocarpa HOM05D004449 ORTHO05D005473 4.3e-17 93.6 54 79.6
Aqoxy1G00845 Aquilegia oxysepala HOM05D004449 ORTHO05D005473 5.6e-17 93.2 57 73.7
BcaB02g09373 Brassica carinata HOM05D004449 ORTHO05D005473 5.6e-17 93.2 89 56.2
C04p11920 Brassica napus HOM05D004449 ORTHO05D005473 5.6e-17 93.2 89 56.2
BolC4t22839H Brassica oleracea HOM05D004449 ORTHO05D005473 5.6e-17 93.2 89 56.2
Glyma.13G153700 Glycine max HOM05D004449 ORTHO05D005473 5.6e-17 93.2 56 76.8
PSO384G3644 Papaver somniferum HOM05D004449 ORTHO05D005473 5.6e-17 93.2 57 75.4
AL4G32330 Arabidopsis lyrata HOM05D004449 ORTHO05D005473 7.3e-17 92.8 88 55.7
C03p23440 Brassica napus HOM05D004449 ORTHO05D005473 7.3e-17 92.8 88 55.7
BolC3t14740H Brassica oleracea HOM05D004449 ORTHO05D005473 7.3e-17 92.8 88 55.7
Cc06_g05800 Coffea canephora HOM05D004449 ORTHO05D005473 7.3e-17 92.8 91 54.9
Aa31LG5G21350 Aethionema arabicum HOM05D004449 ORTHO05D005473 9.5e-17 92.4 59 74.6
MSTRG.19262 Avicennia marina HOM05D004449 ORTHO05D005473 9.5e-17 92.4 54 79.6
BraA03t11251Z Brassica rapa HOM05D004449 ORTHO05D005473 9.5e-17 92.4 88 55.7
FAN05G3501 Fragaria x ananassa HOM05D004449 ORTHO05D005473 9.5e-17 92.4 55 76.4
HanXRQChr03g0063591 Helianthus annuus HOM05D004449 ORTHO05D005473 9.5e-17 92.4 55 78.2
Nitab4.5_0000071g0140 Nicotiana tabacum HOM05D004449 ORTHO05D005473 9.5e-17 92.4 52 80.8
Sopen05g034560 Solanum pennellii HOM05D004449 ORTHO05D005473 9.5e-17 92.4 55 78.2
GSVIVG01033847001 Vitis vinifera HOM05D004449 ORTHO05D005473 9.5e-17 92.4 55 78.2
Gohir.A04G062600 Gossypium hirsutum HOM05D004449 ORTHO05D005473 1.2e-16 92.0 59 74.6
Lj2A137G26 Lonicera japonica HOM05D004449 ORTHO05D005473 1.2e-16 92.0 53 81.1
Lj1g0018712 Lotus japonicus HOM05D004449 ORTHO05D005473 1.2e-16 92.0 57 73.7
Nitab4.5_0004212g0050 Nicotiana tabacum HOM05D004449 ORTHO05D005473 1.2e-16 92.0 53 81.1
TAR623G0834 Trochodendron aralioides HOM05D004449 ORTHO05D005473 1.2e-16 92.0 55 76.4
A03p20000 Brassica napus HOM05D004449 ORTHO05D005473 1.6e-16 91.7 88 55.7
Gohir.D04G099600 Gossypium hirsutum HOM05D004449 ORTHO05D005473 1.6e-16 91.7 59 72.9
Gorai.009G402500 Gossypium raimondii HOM05D004449 ORTHO05D005473 1.6e-16 91.7 59 72.9
Sp4g18450 Schrenkiella parvula HOM05D004449 ORTHO05D005473 1.6e-16 91.7 54 79.6
EL10Ac8g19596 Beta vulgaris HOM05D004449 ORTHO05D005473 2.1e-16 91.3 57 71.9
CAN.G694.90 Capsicum annuum HOM05D004449 ORTHO05D005473 2.1e-16 91.3 57 73.7
AUR62037092 Chenopodium quinoa HOM05D004449 ORTHO05D005473 2.1e-16 91.3 55 74.5
FAN02G4498 Fragaria x ananassa HOM05D004449 ORTHO05D005473 2.1e-16 91.3 55 74.5
Manes.08G025500 Manihot esculenta HOM05D004449 ORTHO05D005473 2.1e-16 91.3 54 81.5
Peaxi162Scf00858g00311 Petunia axillaris HOM05D004449 ORTHO05D005473 2.1e-16 91.3 53 81.1
RcHm_v2.0_Chr3g0473801 Rosa chinensis HOM05D004449 ORTHO05D005473 2.1e-16 91.3 55 74.5
Sed0019477 Sechium edule HOM05D004449 ORTHO05D005473 2.1e-16 91.3 54 79.6
Ah.04g162190 Amaranthus hybridus HOM05D005123 ORTHO05D006532 2.8e-16 90.9 56 75.0
ATR1125G096 Amborella trichopoda HOM05D004449 ORTHO05D005473 2.8e-16 90.9 53 79.2
PGSC0003DMG400023338 Solanum tuberosum HOM05D004449 ORTHO05D005473 2.8e-16 90.9 55 76.4
FAN05G3651 Fragaria x ananassa HOM05D004449 ORTHO05D005473 4.7e-16 90.1 55 74.5
Sc02g0000280 Simmondsia chinensis HOM05D004449 ORTHO05D005473 4.7e-16 90.1 54 74.1
Cpa.g.sc999.2 Carica papaya HOM05D004449 ORTHO05D005473 6.2e-16 89.7 55 74.5
Solyc05g056150.4 Solanum lycopersicum HOM05D004449 ORTHO05D005473 6.2e-16 89.7 55 76.4
Haze_19615 Corylus avellana HOM05D004449 ORTHO05D005473 8.1e-16 89.4 108 48.1
PSO339G4690 Papaver somniferum HOM05D004449 ORTHO05D005473 8.1e-16 89.4 57 71.9
Potri.017G124800 Populus trichocarpa HOM05D004449 ORTHO05D005473 8.1e-16 89.4 54 77.8
Duzib093G2067 Durio zibethinus HOM05D004449 ORTHO05D005473 1.1e-15 89.0 93 50.5
Cfa016611 Carpinus fangiana HOM05D004449 ORTHO05D005473 1.4e-15 88.6 55 74.5
vmacro04351 Vaccinium macrocarpon HOM05D004449 ORTHO05D005473 1.8e-15 88.2 55 80.0
SalBow3G1569 Salvia bowleyana HOM05D004449 ORTHO05D005473 4.0e-15 87.0 55 72.7
SHI27835 Sapria himalayana HOM05D004449 ORTHO05D005473 4.0e-15 87.0 55 72.7
Atru.chr8.1532 Acer truncatum HOM05D004449 ORTHO05D005473 5.2e-15 86.7 50 80.0
AUR62036483 Chenopodium quinoa HOM05D004449 ORTHO05D005473 5.2e-15 86.7 55 70.9
Nn6g34893 Nelumbo nucifera HOM05D004449 ORTHO05D005473 5.2e-15 86.7 90 52.2
SalBow4G0277 Salvia bowleyana HOM05D004449 ORTHO05D005473 5.2e-15 86.7 55 72.7
Zm00001eb020250 Zea mays HOM05D004449 ORTHO05D005473 5.2e-15 86.7 53 75.5
Zm00001eb287580 Zea mays HOM05D004449 ORTHO05D005473 6.8e-15 86.3 53 73.6
CiPaw.10G010000 Carya illinoinensis HOM05D004449 ORTHO05D005473 8.9e-15 85.9 54 74.1
CANSAT64G1281 Cannabis sativa HOM05D004449 ORTHO05D005473 1.2e-14 85.5 54 74.1
COL.COLO4_29729 Corchorus olitorius HOM05D004449 ORTHO05D005473 1.2e-14 85.5 50 80.0
Atru.chr12.1330 Acer truncatum HOM05D004449 ORTHO05D005473 2.0e-14 84.7 50 78.0
CDE07G1047 Ceratophyllum demersum HOM05D004449 ORTHO05D005473 4.4e-14 83.6 53 71.7
HPP92_001188 Vanilla planifolia HOM05D004449 ORTHO05D005473 5.8e-14 83.2 53 73.6
arahy.Tifrunner.gnm1.ann1.25PPNH Arachis hypogaea HOM05D019151 ORTHO05D082486 4.9e-13 80.1 98 42.9
SEGI_22783 Sequoiadendron giganteum HOM05D004449 ORTHO05D005473 6.4e-13 79.7 54 66.7
Pp3c12_22840 Physcomitrium patens HOM05D004449 ORTHO05D005473 1.1e-12 79.0 56 66.1
CBR_g21822 Chara braunii HOM05D004449 ORTHO05D005473 1.4e-12 78.6 54 68.5
Cc11_g01850 Coffea canephora HOM05D004449 ORTHO05D005473 1.9e-12 78.2 59 64.4
SMO271G0065 Selaginella moellendorffii HOM05D004449 ORTHO05D005473 1.9e-12 78.2 55 65.5
AagrBONN_evm.TU.Sc2ySwM_344.169 Anthoceros agrestis HOM05D004449 ORTHO05D005473 5.4e-12 76.6 89 47.2
arahy.Tifrunner.gnm1.ann1.SSU5GD Arachis hypogaea HOM05D019977 ORTHO05D082232 5.4e-12 76.6 330 26.4
Cre12.g495300 Chlamydomonas reinhardtii HOM05D004449 ORTHO05D005473 9.2e-12 75.9 50 68.0
ClCG08G000960 Citrullus lanatus HOM05D004449 ORTHO05D005473 2.7e-11 74.3 56 62.5
SMO308G0039 Selaginella moellendorffii HOM05D004449 ORTHO05D005473 4.6e-11 73.6 96 43.8
SMO164G0227 Selaginella moellendorffii HOM05D004449 ORTHO05D005473 1.7e-10 71.6 54 64.8
unitig_8.g4306 Utricularia gibba HOM05D004449 ORTHO05D005473 6.6e-10 69.7 50 62.0
PRCOL_00002294 Prasinoderma coloniale HOM05D004449 ORTHO05D005473 3.3e-09 67.4 55 60.0
MCO11G008 Micromonas commoda HOM05D004449 ORTHO05D005473 4.3e-09 67.0 54 57.4
Sabra17G0105100 Salix brachista HOM05D001392 ORTHO05D006407 2.8e-08 64.3 38 81.6
Mapoly0011s0027 Marchantia polymorpha HOM05D004449 ORTHO05D005473 1.1e-07 62.4 50 60.0
BcaC02g11725 Brassica carinata HOM05D004449 ORTHO05D005473 8.9e-07 59.3 71 49.3
BcaC02g11727 Brassica carinata HOM05D004449 ORTHO05D005473 8.9e-07 59.3 71 49.3
BcaC02g11729 Brassica carinata HOM05D004449 ORTHO05D005473 4.4e-06 57.0 37 75.7


User provided reference genes

Program Settings