Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.TFGA9S Arachis hypogaea HOM05D005267 ORTHO05D006303 7.9e-118 427.2 222 100.0
arahy.Tifrunner.gnm1.ann1.H25EQ1 Arachis hypogaea HOM05D005267 ORTHO05D006303 2.6e-52 209.5 114 87.7
arahy.Tifrunner.gnm1.ann1.3RXG3F Arachis hypogaea HOM05D005267 ORTHO05D006303 2.2e-51 206.5 114 86.0
Ca_18103_v3 Cicer arietinum L. HOM05D005267 ORTHO05D006303 9.8e-44 181.0 119 74.8
Medtr1g054315 Medicago truncatula HOM05D005267 ORTHO05D006303 9.8e-44 181.0 108 78.7
Glyma.02G167800 Glycine max HOM05D005267 ORTHO05D006303 1.3e-43 180.6 107 78.5
Lalb_Chr02g0153991 Lupinus albus HOM05D005267 ORTHO05D006303 1.7e-43 180.3 125 71.2
Psat6g110480 Pisum sativum HOM05D005267 ORTHO05D006303 3.7e-43 179.1 131 70.2
Lj5g0006264 Lotus japonicus HOM05D005267 ORTHO05D006303 8.3e-43 177.9 114 76.3
TPR.G30771 Trifolium pratense HOM05D005267 ORTHO05D006303 1.1e-42 177.6 119 75.6
Lalb_Chr21g0316191 Lupinus albus HOM05D005267 ORTHO05D006303 1.9e-42 176.8 131 71.0
Glyma.09G103300 Glycine max HOM05D005267 ORTHO05D006303 4.1e-42 175.6 113 73.5
COL.COLO4_29458 Corchorus olitorius HOM05D005267 ORTHO05D006303 2.0e-41 173.3 107 75.7
Thecc.05G181400 Theobroma cacao HOM05D005267 ORTHO05D006303 1.0e-40 171.0 109 73.4
Phvul.007G264300 Phaseolus vulgaris HOM05D005267 ORTHO05D006303 5.0e-40 168.7 107 76.6
Sopen10g032100 Solanum pennellii HOM05D005267 ORTHO05D006303 1.1e-39 167.5 125 63.2
MBI05_g37655_MAGBIO Magnolia biondii HOM05D005267 ORTHO05D006303 1.5e-39 167.2 109 70.6
Solyc10g081590.2 Solanum lycopersicum HOM05D005267 ORTHO05D006303 1.5e-39 167.2 125 63.2
PGSC0003DMG400028129 Solanum tuberosum HOM05D005267 ORTHO05D006303 1.5e-39 167.2 125 63.2
VMungo0720G2658 Vigna mungo HOM05D005267 ORTHO05D006303 1.9e-39 166.8 107 75.7
GSVIVG01022470001 Vitis vinifera HOM05D005267 ORTHO05D006303 3.3e-39 166.0 111 71.2
Duzib128G1921 Durio zibethinus HOM05D005267 ORTHO05D006303 7.3e-39 164.9 109 70.6
Gorai.006G146100 Gossypium raimondii HOM05D005267 ORTHO05D006303 9.5e-39 164.5 113 68.1
Gohir.D09G127100 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.2e-38 164.1 109 68.8
TAR623G0682 Trochodendron aralioides HOM05D005267 ORTHO05D006303 1.2e-38 164.1 107 72.9
Rhsim03G0057300 Rhododendron simsii HOM05D005267 ORTHO05D006303 1.6e-38 163.7 114 67.5
Nitab4.5_0008653g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 2.1e-38 163.3 120 65.0
Gohir.A09G131300 Gossypium hirsutum HOM05D005267 ORTHO05D006303 4.7e-38 162.2 107 69.2
Rhsim03G0057000 Rhododendron simsii HOM05D005267 ORTHO05D006303 4.7e-38 162.2 113 68.1
Eucgr.A02526 Eucalyptus grandis HOM05D005267 ORTHO05D006303 8.1e-38 161.4 107 70.1
Gohir.D09G127600 Gossypium hirsutum HOM05D005267 ORTHO05D006303 8.1e-38 161.4 113 66.4
Atru.chr8.1242 Acer truncatum HOM05D005267 ORTHO05D006303 1.4e-37 160.6 109 70.6
CANSAT64G2985 Cannabis sativa HOM05D005267 ORTHO05D006303 1.4e-37 160.6 115 67.8
Migut.L01860 Erythranthe guttata HOM05D005267 ORTHO05D006303 1.4e-37 160.6 113 67.3
Eucgr.A02521 Eucalyptus grandis HOM05D005267 ORTHO05D006303 1.8e-37 160.2 107 70.1
Nitab4.5_0006454g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 2.3e-37 159.8 120 64.2
Prupe.7G087000 Prunus persica HOM05D005267 ORTHO05D006303 2.3e-37 159.8 127 63.8
PGR142G1416 Punica granatum HOM05D005267 ORTHO05D006303 2.3e-37 159.8 119 68.9
Sc01g0005180 Simmondsia chinensis HOM05D005267 ORTHO05D006303 3.1e-37 159.5 109 68.8
Actinidia37788 Actinidia chinensis HOM05D005267 ORTHO05D006303 4.0e-37 159.1 115 65.2
Cc06_g07120 Coffea canephora HOM05D005267 ORTHO05D006303 4.0e-37 159.1 114 65.8
arahy.Tifrunner.gnm1.ann1.74GVQ2 Arachis hypogaea HOM05D005267 ORTHO05D006303 5.2e-37 158.7 80 93.8
PSO384G1433 Papaver somniferum HOM05D005267 ORTHO05D006303 5.2e-37 158.7 108 71.3
CiPaw.10G022300 Carya illinoinensis HOM05D005267 ORTHO05D006303 8.9e-37 157.9 113 69.0
Cpa.g.sc85.6 Carica papaya HOM05D005267 ORTHO05D006303 1.2e-36 157.5 106 67.9
DCAR_013470 Daucus carota HOM05D006729 ORTHO05D008502 1.2e-36 157.5 113 65.5
MELO3C024594.2 Cucumis melo HOM05D005267 ORTHO05D006303 1.5e-36 157.1 115 66.1
CsaV3_6G041190 Cucumis sativus L. HOM05D005267 ORTHO05D006303 2.0e-36 156.8 115 65.2
Nn6g32442 Nelumbo nucifera HOM05D005267 ORTHO05D006303 2.0e-36 156.8 108 67.6
Oeu063094.3 Olea europaea HOM05D005267 ORTHO05D006303 3.4e-36 156.0 106 67.0
Cfa020104 Carpinus fangiana HOM05D005267 ORTHO05D006303 4.4e-36 155.6 106 70.8
MD14G1048200 Malus domestica HOM05D005267 ORTHO05D006303 5.8e-36 155.2 133 58.6
Manes.08G038900 Manihot esculenta HOM05D005267 ORTHO05D006303 5.8e-36 155.2 115 66.1
Haze_20086 Corylus avellana HOM05D005267 ORTHO05D006303 7.5e-36 154.8 106 69.8
THA.LOC104821240 Tarenaya hassleriana HOM05D005267 ORTHO05D006303 7.5e-36 154.8 108 66.7
CSS0044429 Camellia sinensis var. sinensis HOM05D005267 ORTHO05D006303 1.7e-35 153.7 106 66.0
Ciclev10012610m.g Citrus clementina HOM05D005267 ORTHO05D006303 1.7e-35 153.7 108 66.7
Thhalv10006199m.g Eutrema salsugineum HOM05D005267 ORTHO05D006303 1.7e-35 153.7 125 62.4
Aa31LG10G13030 Aethionema arabicum HOM05D006729 ORTHO05D008502 2.2e-35 153.3 118 62.7
CARHR168860 Cardamine hirsuta HOM05D005267 ORTHO05D006303 2.2e-35 153.3 125 61.6
ClCG01G015080 Citrullus lanatus HOM05D005267 ORTHO05D006303 2.9e-35 152.9 115 64.3
Aqoxy1G00565 Aquilegia oxysepala HOM05D005267 ORTHO05D006303 3.7e-35 152.5 110 64.5
AL5G40230 Arabidopsis lyrata HOM05D005267 ORTHO05D006303 3.7e-35 152.5 124 61.3
A09p51030 Brassica napus HOM05D006729 ORTHO05D008502 4.9e-35 152.1 113 64.6
SGA_v2.0_scaffold41G15783 Striga asiatica HOM05D005267 ORTHO05D006303 4.9e-35 152.1 105 67.6
BcaC07g40256 Brassica carinata HOM05D005267 ORTHO05D006303 6.4e-35 151.8 108 66.7
C08p33850 Brassica napus HOM05D006729 ORTHO05D008502 6.4e-35 151.8 108 66.7
BolC8t50983H Brassica oleracea HOM05D006729 ORTHO05D008502 6.4e-35 151.8 108 66.7
BraA09t40549Z Brassica rapa HOM05D005267 ORTHO05D006303 6.4e-35 151.8 113 64.6
CDE05G1441 Ceratophyllum demersum HOM05D005267 ORTHO05D006303 6.4e-35 151.8 107 66.4
RcHm_v2.0_Chr3g0477741 Rosa chinensis HOM05D005267 ORTHO05D006303 8.3e-35 151.4 117 61.5
RcHm_v2.0_Chr3g0477781 Rosa chinensis HOM05D005267 ORTHO05D006303 8.3e-35 151.4 117 61.5
AT3G58470 Arabidopsis thaliana HOM05D005267 ORTHO05D006303 3.2e-34 149.4 125 60.8
Carub.0005s2521 Capsella rubella HOM05D005267 ORTHO05D006303 3.2e-34 149.4 124 59.7
TWI77G0597 Tripterygium wilfordii HOM05D005267 ORTHO05D006303 3.2e-34 149.4 105 66.7
FAN05G5707 Fragaria x ananassa HOM05D005267 ORTHO05D006303 4.1e-34 149.1 111 64.0
Potri.016G063600 Populus trichocarpa HOM05D005267 ORTHO05D006303 4.1e-34 149.1 106 67.0
FAN05G1850 Fragaria x ananassa HOM05D005267 ORTHO05D006303 7.1e-34 148.3 109 65.1
Sed0012434 Sechium edule HOM05D005267 ORTHO05D006303 7.1e-34 148.3 112 62.5
Zm00001eb057270 Zea mays HOM05D005267 ORTHO05D006303 7.1e-34 148.3 109 62.4
BcaC07g40203 Brassica carinata HOM05D005267 ORTHO05D006303 1.2e-33 147.5 108 64.8
ECA248G0309 Erigeron canadensis HOM05D005267 ORTHO05D006303 1.2e-33 147.5 107 65.4
FAN02G1071 Fragaria x ananassa HOM05D005267 ORTHO05D006303 1.2e-33 147.5 109 64.2
FvH4_6g21270 Fragaria vesca HOM05D005267 ORTHO05D006303 1.6e-33 147.1 104 66.3
FAN14G1206 Fragaria x ananassa HOM05D005267 ORTHO05D006303 1.6e-33 147.1 104 66.3
Sp5g04410 Schrenkiella parvula HOM05D005267 ORTHO05D006303 2.1e-33 146.7 124 59.7
QL07p025833 Quercus lobata HOM05D005267 ORTHO05D006303 2.7e-33 146.4 109 66.1
Zm00001eb307210 Zea mays HOM05D005267 ORTHO05D006303 4.6e-33 145.6 110 60.9
Zm00001eb155770 Zea mays HOM05D000737 ORTHO05D006303 2.3e-32 143.3 109 60.6
ATR0697G123 Amborella trichopoda HOM05D006729 ORTHO05D008502 3.9e-32 142.5 105 63.8
Hund15032 Selenicereus undatus HOM05D005267 ORTHO05D006303 3.9e-32 142.5 124 58.1
HanXRQChr01g0026301 Helianthus annuus HOM05D005267 ORTHO05D006303 6.6e-32 141.7 114 60.5
Sabra16G0066000 Salix brachista HOM05D005267 ORTHO05D006303 8.6e-32 141.4 106 63.2
Lsat_1_v5_gn_1_56341 Lactuca sativa HOM05D005267 ORTHO05D006303 1.5e-31 140.6 107 61.7
unitig_899.g15196 Utricularia gibba HOM05D005267 ORTHO05D006303 2.5e-31 139.8 108 61.1
Os03g0749900 Oryza sativa ssp. japonica HOM05D005267 ORTHO05D006303 5.6e-31 138.7 108 61.1
Zm00001eb298070 Zea mays HOM05D005267 ORTHO05D006303 7.3e-31 138.3 110 57.3
arahy.Tifrunner.gnm1.ann1.HYSL0N Arachis hypogaea HOM05D005267 ORTHO05D006303 1.2e-30 137.5 67 94.0
SEGI_05913 Sequoiadendron giganteum HOM05D005267 ORTHO05D006303 3.6e-30 136.0 110 59.1
AUR62039735 Chenopodium quinoa HOM05D005267 ORTHO05D006303 8.1e-30 134.8 146 49.3
AUR62036286 Chenopodium quinoa HOM05D005267 ORTHO05D006303 1.8e-29 133.7 134 51.5
EL10Ac5g11779 Beta vulgaris HOM05D005267 ORTHO05D006303 4.0e-29 132.5 107 57.9
Lj1A1066G52 Lonicera japonica HOM05D005267 ORTHO05D006303 2.2e-27 126.7 106 61.3
arahy.Tifrunner.gnm1.ann1.PYJ9JQ Arachis hypogaea HOM05D005267 ORTHO05D006303 2.9e-27 126.3 64 89.1
Zm00001eb334640 Zea mays HOM05D005267 ORTHO05D006303 1.4e-26 124.0 74 71.6
AagrBONN_evm.TU.Sc2ySwM_344.4688 Anthoceros agrestis HOM05D005267 ORTHO05D006303 1.9e-26 123.6 111 50.5
Dinv11912 Davidia involucrata HOM05D005267 ORTHO05D006303 2.4e-26 123.2 83 69.9
Pp3c20_23410 Physcomitrium patens HOM05D005267 ORTHO05D006303 4.1e-26 122.5 105 54.3
BcaC07g40255 Brassica carinata HOM05D005267 ORTHO05D006303 9.2e-26 121.3 109 56.9
Peaxi162Scf00060g01112 Petunia axillaris HOM05D005267 ORTHO05D006303 2.7e-25 119.8 107 56.1
Mapoly0207s0006 Marchantia polymorpha HOM05D005267 ORTHO05D006303 1.1e-23 114.4 114 46.5
CBR_g551 Chara braunii HOM05D005267 ORTHO05D006303 3.4e-20 102.8 103 47.6
arahy.Tifrunner.gnm1.ann1.4NE9EM Arachis hypogaea HOM05D005267 ORTHO05D006303 7.1e-18 95.1 45 97.8
Zm00001eb096050 Zea mays HOM05D005267 ORTHO05D006303 4.6e-17 92.4 80 57.5
CAN.G128.157 Capsicum annuum HOM05D005267 ORTHO05D006303 1.7e-16 90.5 54 68.5
Glyma.03G214201 Glycine max HOM05D005267 ORTHO05D006303 1.7e-16 90.5 55 70.9
vmacro07530 Vaccinium macrocarpon HOM05D005267 ORTHO05D006303 4.3e-15 85.9 54 66.7
BolC4t23005H Brassica oleracea HOM05D005267 ORTHO05D006303 5.6e-15 85.5 58 58.6
VMungo0464G2161 Vigna mungo HOM05D005267 ORTHO05D006303 5.6e-15 85.5 58 63.8
A04p02570 Brassica napus HOM05D005267 ORTHO05D006303 9.6e-15 84.7 78 55.1
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 9.6e-15 84.7 52 71.2
Rhsim03G0056100 Rhododendron simsii HOM05D000045 ORTHO05D006303 9.6e-15 84.7 66 65.2
Hund24301 Selenicereus undatus HOM05D005267 ORTHO05D006303 1.6e-14 84.0 52 69.2
Hund24299 Selenicereus undatus HOM05D005267 ORTHO05D006303 3.6e-14 82.8 52 67.3
Zm00001eb020160 Zea mays HOM05D005267 ORTHO05D006303 2.6e-12 76.6 41 70.7
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 1.9e-10 70.5 38 76.3
MSTRG.10424 Avicennia marina HOM05D005267 ORTHO05D006303 7.1e-10 68.6 55 58.2
HPP92_004175 Vanilla planifolia HOM05D002029 ORTHO05D002158 9.3e-10 68.2 59 52.5
C04p14160 Brassica napus HOM05D005267 ORTHO05D006303 1.6e-09 67.4 38 71.1
FvH4_6g21293 Fragaria vesca HOM05D005267 ORTHO05D006303 2.1e-09 67.0 36 80.6
BcaB02g08262 Brassica carinata HOM05D005267 ORTHO05D006303 1.3e-08 64.3 56 57.1
SMO143G0102 Selaginella moellendorffii HOM05D005267 ORTHO05D006303 3.0e-08 63.2 105 31.4
CBR_g49867 Chara braunii HOM05D000019 ORTHO05D000353 6.7e-08 62.0 101 30.7
Mapoly0004s0240 Marchantia polymorpha HOM05D005267 ORTHO05D006303 1.5e-07 60.8 105 32.4
Pp3c20_11400 Physcomitrium patens HOM05D005267 ORTHO05D006303 3.6e-06 56.2 100 27.0
Cfa022098 Carpinus fangiana HOM05D005267 ORTHO05D125748 4.8e-06 55.8 107 30.8


User provided reference genes

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