Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.T9GKNP Arachis hypogaea HOM05D003442 ORTHO05D004005 1.3e-57 226.1 112 100.0
Psat4g090720 Pisum sativum HOM05D003442 ORTHO05D004005 3.4e-53 211.5 112 92.9
Glyma.16G142600 Glycine max HOM05D003442 ORTHO05D004005 1.3e-52 209.5 110 92.7
Ca_22246_v3 Cicer arietinum L. HOM05D003442 ORTHO05D004005 1.7e-52 209.1 111 91.0
Medtr8g078370 Medicago truncatula HOM05D003442 ORTHO05D004005 2.2e-52 208.8 110 91.8
VMungo0251G0407 Vigna mungo HOM05D003442 ORTHO05D004005 4.9e-52 207.6 112 92.0
Phvul.003G250866 Phaseolus vulgaris HOM05D003442 ORTHO05D004005 6.5e-52 207.2 111 91.0
Lalb_Chr09g0333641 Lupinus albus HOM05D003442 ORTHO05D004005 8.4e-52 206.8 110 91.8
Lalb_Chr05g0227421 Lupinus albus HOM05D003442 ORTHO05D004005 1.1e-51 206.5 110 90.0
Glyma.02G059800 Glycine max HOM05D003442 ORTHO05D004005 1.4e-51 206.1 110 91.8
Lj4g0025932 Lotus japonicus HOM05D003442 ORTHO05D004005 1.9e-51 205.7 107 93.5
Ciclev10031531m.g Citrus clementina HOM05D003442 ORTHO05D004005 9.3e-51 203.4 111 87.4
Eucgr.H02340 Eucalyptus grandis HOM05D003442 ORTHO05D004005 3.5e-50 201.4 111 88.3
Lj2g0002798 Lotus japonicus HOM05D003442 ORTHO05D004005 6.0e-50 200.7 110 89.1
Atru.chr12.1913 Acer truncatum HOM05D003442 ORTHO05D004005 1.0e-49 199.9 111 86.5
Nn7g37514 Nelumbo nucifera HOM05D003442 ORTHO05D004005 1.8e-49 199.1 110 86.4
Thecc.05G221300 Theobroma cacao HOM05D003442 ORTHO05D004005 1.8e-49 199.1 110 86.4
Cpa.g.sc43.106 Carica papaya HOM05D003442 ORTHO05D004005 3.0e-49 198.4 110 85.5
CiPaw.05G214600 Carya illinoinensis HOM05D003442 ORTHO05D004005 3.0e-49 198.4 110 85.5
Duzib177G0664 Durio zibethinus HOM05D003442 ORTHO05D004005 3.0e-49 198.4 110 87.3
TAR636G2465 Trochodendron aralioides HOM05D003442 ORTHO05D004005 1.1e-48 196.4 111 84.7
Manes.09G128600 Manihot esculenta HOM05D003442 ORTHO05D004005 1.5e-48 196.1 110 85.5
Prupe.2G328400 Prunus persica HOM05D003442 ORTHO05D004005 1.9e-48 195.7 110 84.5
CANSAT21G2378 Cannabis sativa HOM05D003442 ORTHO05D004005 2.5e-48 195.3 110 85.5
MD01G1238500 Malus domestica HOM05D003442 ORTHO05D004005 2.5e-48 195.3 110 84.5
CSS0045568 Camellia sinensis var. sinensis HOM05D003442 ORTHO05D004005 3.3e-48 194.9 110 82.7
QL09p021203 Quercus lobata HOM05D003442 ORTHO05D004005 3.3e-48 194.9 110 84.5
GSVIVG01024344001 Vitis vinifera HOM05D003442 ORTHO05D004005 4.3e-48 194.5 110 85.5
CsaV3_3G040000 Cucumis sativus L. HOM05D003442 ORTHO05D004005 5.7e-48 194.1 110 85.5
Gohir.A08G221656 Gossypium hirsutum HOM05D003442 ORTHO05D004005 7.4e-48 193.7 110 84.5
PGR142G0137 Punica granatum HOM05D003442 ORTHO05D004005 7.4e-48 193.7 110 86.4
Manes.08G064200 Manihot esculenta HOM05D003442 ORTHO05D004005 9.7e-48 193.4 110 84.5
Cc09_g04240 Coffea canephora HOM05D003442 ORTHO05D004005 1.3e-47 193.0 110 81.8
MELO3C009742.2 Cucumis melo HOM05D003442 ORTHO05D004005 1.3e-47 193.0 110 85.5
MBI07_g36707_MAGBIO Magnolia biondii HOM05D003442 ORTHO05D004005 1.3e-47 193.0 111 82.9
MBI07_g38305_MAGBIO Magnolia biondii HOM05D003442 ORTHO05D004005 1.3e-47 193.0 111 82.9
MD07G1310400 Malus domestica HOM05D003442 ORTHO05D004005 1.3e-47 193.0 110 84.5
Potri.013G078700 Populus trichocarpa HOM05D003442 ORTHO05D004005 1.6e-47 192.6 110 84.5
Cfa016067 Carpinus fangiana HOM05D003442 ORTHO05D004005 2.2e-47 192.2 110 83.6
Nitab4.5_0003759g0020 Nicotiana tabacum HOM05D003442 ORTHO05D004005 2.2e-47 192.2 110 81.8
ClCG10G016340 Citrullus lanatus HOM05D003442 ORTHO05D004005 2.8e-47 191.8 110 84.5
EL10Ac4g10031 Beta vulgaris HOM05D003442 ORTHO05D004005 3.7e-47 191.4 111 81.1
Gohir.D03G053800 Gossypium hirsutum HOM05D003442 ORTHO05D004005 3.7e-47 191.4 110 83.6
Gorai.004G256400 Gossypium raimondii HOM05D003442 ORTHO05D004005 3.7e-47 191.4 110 84.5
Hund07385 Selenicereus undatus HOM05D003442 ORTHO05D004005 4.8e-47 191.0 110 83.6
vmacro12087 Vaccinium macrocarpon HOM05D003442 ORTHO05D004005 4.8e-47 191.0 110 83.6
PGSC0003DMG401011206 Solanum tuberosum HOM05D003442 ORTHO05D004005 6.3e-47 190.7 109 82.6
TWI60G0615 Tripterygium wilfordii HOM05D003442 ORTHO05D004005 8.2e-47 190.3 110 82.7
FvH4_7g34170 Fragaria vesca HOM05D003442 ORTHO05D004005 1.1e-46 189.9 110 81.8
Sopen07g002070 Solanum pennellii HOM05D003442 ORTHO05D004005 1.1e-46 189.9 109 82.6
FAN10G2135 Fragaria x ananassa HOM05D003442 ORTHO05D004005 1.4e-46 189.5 110 80.9
Gohir.D08G241000 Gossypium hirsutum HOM05D003442 ORTHO05D004005 1.4e-46 189.5 110 83.6
Gorai.003G056300 Gossypium raimondii HOM05D003442 ORTHO05D004005 1.4e-46 189.5 110 82.7
RcHm_v2.0_Chr1g0384521 Rosa chinensis HOM05D003442 ORTHO05D004005 1.4e-46 189.5 110 80.9
Sed0022579 Sechium edule HOM05D003442 ORTHO05D004005 1.4e-46 189.5 109 84.4
Sabra13G0073800 Salix brachista HOM05D003442 ORTHO05D004005 1.8e-46 189.1 112 83.0
ATR0743G255 Amborella trichopoda HOM05D003442 ORTHO05D004005 3.1e-46 188.3 111 83.8
CAN.G1610.2 Capsicum annuum HOM05D003442 ORTHO05D004005 3.1e-46 188.3 110 80.9
FAN03G3412 Fragaria x ananassa HOM05D003442 ORTHO05D004005 3.1e-46 188.3 110 80.0
SalBow3G0476 Salvia bowleyana HOM05D003442 ORTHO05D004005 3.1e-46 188.3 109 80.7
Solyc07g005940.4 Solanum lycopersicum HOM05D003442 ORTHO05D004005 3.1e-46 188.3 109 81.7
AUR62000266 Chenopodium quinoa HOM05D003442 ORTHO05D004005 4.1e-46 188.0 110 80.9
Rhsim05G0022700 Rhododendron simsii HOM05D003442 ORTHO05D004005 4.1e-46 188.0 111 81.1
Sed0014541 Sechium edule HOM05D003442 ORTHO05D004005 4.1e-46 188.0 110 81.8
Actinidia31263 Actinidia chinensis HOM05D003442 ORTHO05D004005 5.3e-46 187.6 109 83.5
AUR62006614 Chenopodium quinoa HOM05D003442 ORTHO05D004005 5.3e-46 187.6 110 80.9
SalBow1G2470 Salvia bowleyana HOM05D003442 ORTHO05D004005 5.3e-46 187.6 109 79.8
SalBow1G3122 Salvia bowleyana HOM05D003442 ORTHO05D004005 5.3e-46 187.6 109 79.8
Sopen12g004770 Solanum pennellii HOM05D003442 ORTHO05D004005 5.3e-46 187.6 110 80.9
PSO017G5499 Papaver somniferum HOM05D003442 ORTHO05D004005 9.0e-46 186.8 110 80.9
Peaxi162Scf00062g00013 Petunia axillaris HOM05D003442 ORTHO05D004005 9.0e-46 186.8 110 79.1
FAN08G1651 Fragaria x ananassa HOM05D003442 ORTHO05D004005 1.2e-45 186.4 110 79.1
PGSC0003DMG400007911 Solanum tuberosum HOM05D003442 ORTHO05D004005 1.2e-45 186.4 110 80.0
Solyc12g009890.3 Solanum lycopersicum HOM05D003442 ORTHO05D004005 1.5e-45 186.0 110 80.0
TWI32G0704 Tripterygium wilfordii HOM05D003442 ORTHO05D004005 1.5e-45 186.0 110 81.8
Actinidia07920 Actinidia chinensis HOM05D003442 ORTHO05D004005 2.0e-45 185.7 109 83.5
PSO675G6803 Papaver somniferum HOM05D003442 ORTHO05D004005 2.0e-45 185.7 110 80.0
Rhsim09G0020400 Rhododendron simsii HOM05D003442 ORTHO05D004005 3.4e-45 184.9 110 80.0
THA.LOC104819563 Tarenaya hassleriana HOM05D003442 ORTHO05D004005 3.4e-45 184.9 110 81.8
FAN18G0534 Fragaria x ananassa HOM05D003442 ORTHO05D004005 4.5e-45 184.5 110 78.2
Migut.F02084 Erythranthe guttata HOM05D003442 ORTHO05D004005 7.6e-45 183.7 110 78.2
THA.LOC104804387 Tarenaya hassleriana HOM05D003442 ORTHO05D004005 1.0e-44 183.3 110 80.9
PGR042G1782 Punica granatum HOM05D003442 ORTHO05D004005 1.3e-44 183.0 110 80.9
Aqoxy6G03064 Aquilegia oxysepala HOM05D003442 ORTHO05D004005 1.7e-44 182.6 108 80.6
Potri.019G047800 Populus trichocarpa HOM05D003442 ORTHO05D004005 2.2e-44 182.2 110 80.9
Sc16g0010680 Simmondsia chinensis HOM05D003442 ORTHO05D004005 2.2e-44 182.2 101 87.1
CARHR242670 Cardamine hirsuta HOM05D003442 ORTHO05D004005 5.0e-44 181.0 110 80.0
BcaNung03800 Brassica carinata HOM05D003442 ORTHO05D004005 6.5e-44 180.6 110 80.0
BolC1t00448H Brassica oleracea HOM05D003442 ORTHO05D004005 6.5e-44 180.6 110 80.0
Thhalv10025183m.g Eutrema salsugineum HOM05D003442 ORTHO05D004005 1.1e-43 179.9 110 80.0
Os07g0549700 Oryza sativa ssp. japonica HOM05D003442 ORTHO05D004005 1.1e-43 179.9 111 76.6
A01p04260 Brassica napus HOM05D003442 ORTHO05D004005 1.4e-43 179.5 110 79.1
BraA01t00415Z Brassica rapa HOM05D003442 ORTHO05D004005 1.4e-43 179.5 110 79.1
Migut.F01837 Erythranthe guttata HOM05D003442 ORTHO05D004005 1.4e-43 179.5 109 77.1
HPP92_007347 Vanilla planifolia HOM05D003442 ORTHO05D004005 1.4e-43 179.5 112 78.6
SEGI_25036 Sequoiadendron giganteum HOM05D003442 ORTHO05D004005 1.9e-43 179.1 110 76.4
MSTRG.8187 Avicennia marina HOM05D003442 ORTHO05D004005 2.5e-43 178.7 110 77.3
AL5G22780 Arabidopsis lyrata HOM05D003442 ORTHO05D004005 3.2e-43 178.3 110 79.1
FAN01G2089 Fragaria x ananassa HOM05D003442 ORTHO05D004005 3.2e-43 178.3 121 73.6
TAR365G0520 Trochodendron aralioides HOM05D003442 ORTHO05D004005 4.2e-43 177.9 106 80.2
Zm00001eb323620 Zea mays HOM05D003442 ORTHO05D004005 4.2e-43 177.9 110 78.2
Ah.04g159350 Amaranthus hybridus HOM05D003442 ORTHO05D004005 5.5e-43 177.6 101 83.2
BcaB03g11847 Brassica carinata HOM05D003442 ORTHO05D004005 9.3e-43 176.8 110 78.2
Nitab4.5_0002329g0200 Nicotiana tabacum HOM05D003442 ORTHO05D004005 9.3e-43 176.8 110 76.4
BcaC01g00920 Brassica carinata HOM05D003442 ORTHO05D004005 1.6e-42 176.0 110 78.2
Lsat_1_v5_gn_6_25940 Lactuca sativa HOM05D003442 ORTHO05D004005 2.1e-42 175.6 109 75.2
Zm00001eb106630 Zea mays HOM05D003442 ORTHO05D004005 2.7e-42 175.3 110 78.2
AL7G17200 Arabidopsis lyrata HOM05D003442 ORTHO05D004005 3.6e-42 174.9 110 76.4
AT3G42050 Arabidopsis thaliana HOM05D003442 ORTHO05D004005 3.6e-42 174.9 110 76.4
arahy.Tifrunner.gnm1.ann1.CZ7R53 Arachis hypogaea HOM05D003442 ORTHO05D004005 1.0e-41 173.3 94 88.3
A03p62660 Brassica napus HOM05D003442 ORTHO05D004005 1.0e-41 173.3 110 76.4
C07p60210 Brassica napus HOM05D003442 ORTHO05D004005 1.0e-41 173.3 110 76.4
BolC7t46462H Brassica oleracea HOM05D003442 ORTHO05D004005 1.0e-41 173.3 110 76.4
BraA03t15336Z Brassica rapa HOM05D003442 ORTHO05D004005 1.0e-41 173.3 110 76.4
Carub.0007s0621 Capsella rubella HOM05D003442 ORTHO05D004005 1.3e-41 172.9 110 75.5
Nitab4.5_0008310g0020 Nicotiana tabacum HOM05D003442 ORTHO05D004005 1.3e-41 172.9 121 70.2
SGA_v2.0_scaffold340G49317 Striga asiatica HOM05D003442 ORTHO05D004005 1.3e-41 172.9 127 67.7
BraA08t33665Z Brassica rapa HOM05D003442 ORTHO05D004005 3.9e-41 171.4 110 75.5
ECA233G0769 Erigeron canadensis HOM05D003442 ORTHO05D004005 3.9e-41 171.4 110 73.6
Aa31LG2G16640 Aethionema arabicum HOM05D003442 ORTHO05D004005 5.1e-41 171.0 110 74.5
HanXRQChr13g0401211 Helianthus annuus HOM05D003442 ORTHO05D004005 6.7e-41 170.6 110 72.7
BcaNung03365 Brassica carinata HOM05D003442 ORTHO05D004005 1.1e-40 169.9 110 75.5
A08p17030 Brassica napus HOM05D003442 ORTHO05D004005 1.1e-40 169.9 110 74.5
Sp7g31930 Schrenkiella parvula HOM05D003442 ORTHO05D004005 1.1e-40 169.9 110 74.5
DCAR_023762 Daucus carota HOM05D003442 ORTHO05D004005 1.9e-40 169.1 110 74.5
C01p04650 Brassica napus HOM05D003442 ORTHO05D004005 3.3e-40 168.3 101 81.2
Lj2C606G3 Lonicera japonica HOM05D003442 ORTHO05D004005 4.3e-40 167.9 102 78.4
unitig_61.g26274 Utricularia gibba HOM05D003442 ORTHO05D004005 6.3e-39 164.1 101 77.2
arahy.Tifrunner.gnm1.ann1.K5ZCN3 Arachis hypogaea HOM05D003442 ORTHO05D004005 8.2e-39 163.7 100 80.0
DCAR_002085 Daucus carota HOM05D003442 ORTHO05D004005 1.2e-37 159.8 143 57.3
C03p85940 Brassica napus HOM05D003442 ORTHO05D004005 2.6e-37 158.7 110 73.6
Duzib106G0604 Durio zibethinus HOM05D003442 ORTHO05D004005 7.7e-37 157.1 89 86.5
Dinv17142 Davidia involucrata HOM05D003442 ORTHO05D004005 1.7e-36 156.0 89 85.4
Gohir.A02G127200 Gossypium hirsutum HOM05D003442 ORTHO05D004005 5.0e-36 154.5 89 85.4
Peaxi162Scf01313g00235 Petunia axillaris HOM05D003442 ORTHO05D004005 5.0e-36 154.5 89 83.1
PSO675G6576 Papaver somniferum HOM05D003442 ORTHO05D004005 6.5e-36 154.1 123 61.8
Mapoly0102s0002 Marchantia polymorpha HOM05D003442 ORTHO05D004005 1.4e-35 152.9 106 67.9
Aqoxy2G01953 Aquilegia oxysepala HOM05D003442 ORTHO05D004005 7.2e-35 150.6 89 80.9
CDE04G1479 Ceratophyllum demersum HOM05D003442 ORTHO05D004005 9.4e-35 150.2 100 71.0
Haze_00382 Corylus avellana HOM05D003442 ORTHO05D004005 1.2e-34 149.8 88 81.8
Pp3c1_26980 Physcomitrium patens HOM05D003442 ORTHO05D004005 1.2e-34 149.8 107 66.4
SGA_v2.0_scaffold122G33217 Striga asiatica HOM05D003442 ORTHO05D004005 1.6e-34 149.4 88 80.7
COL.COLO4_15183 Corchorus olitorius HOM05D003442 ORTHO05D004005 3.6e-34 148.3 85 84.7
Lj4A843G12 Lonicera japonica HOM05D003442 ORTHO05D004005 6.1e-34 147.5 134 58.2
Hund21933 Selenicereus undatus HOM05D003442 ORTHO05D004005 6.1e-34 147.5 85 84.7
AagrBONN_evm.TU.Sc2ySwM_344.2700 Anthoceros agrestis HOM05D003442 ORTHO05D004005 1.0e-33 146.7 103 66.0
CDE02G3771 Ceratophyllum demersum HOM05D003442 ORTHO05D004005 1.8e-33 146.0 94 72.3
Pp3c10_2890 Physcomitrium patens HOM05D003442 ORTHO05D004005 5.1e-33 144.4 108 64.8
AL5G22860 Arabidopsis lyrata HOM05D003442 ORTHO05D004005 2.4e-30 135.6 85 78.8
SMO361G0576 Selaginella moellendorffii HOM05D003442 ORTHO05D004005 5.3e-30 134.4 108 60.2
CANSAT56G1635 Cannabis sativa HOM05D003442 ORTHO05D004005 6.9e-30 134.0 106 61.3
Oeu007683.1 Olea europaea HOM05D003442 ORTHO05D004005 2.0e-29 132.5 118 59.3
CANSAT35G0024 Cannabis sativa HOM05D003442 ORTHO05D004005 5.9e-29 131.0 106 60.4
Nitab4.5_0006810g0020 Nicotiana tabacum HOM05D003442 ORTHO05D004005 3.2e-27 125.2 79 74.7
FvH4_5g39390 Fragaria vesca HOM05D003442 ORTHO05D004005 7.2e-27 124.0 74 78.4
Sc09g0001320 Simmondsia chinensis HOM05D003442 ORTHO05D004005 9.7e-24 113.6 75 76.0
Cre01.g027800 Chlamydomonas reinhardtii HOM05D003442 ORTHO05D004005 5.9e-21 104.4 93 50.5
ATR0794G079 Amborella trichopoda HOM05D003442 ORTHO05D004005 9.4e-19 97.1 55 81.8
SHI02591 Sapria himalayana HOM05D003442 ORTHO05D004005 1.4e-17 93.2 52 84.6
PRCOL_00001521 Prasinoderma coloniale HOM05D003442 ORTHO05D004005 9.7e-16 87.0 93 45.2
SGA_v2.0_scaffold83G26364 Striga asiatica HOM05D003442 ORTHO05D004005 1.4e-14 83.2 48 81.2
SHI02590 Sapria himalayana HOM05D003442 ORTHO05D004005 2.4e-14 82.4 52 75.0
AagrBONN_evm.TU.Sc2ySwM_368.2763 Anthoceros agrestis HOM05D003442 ORTHO05D004005 2.0e-13 79.3 91 48.4
Pp3c2_19490 Physcomitrium patens HOM05D003442 ORTHO05D004005 1.7e-12 76.3 59 57.6
MCO09G349 Micromonas commoda HOM05D003442 ORTHO05D004005 2.7e-10 68.9 86 37.2
CBR_g3526 Chara braunii HOM05D003442 ORTHO05D004005 3.4e-08 62.0 82 40.2


User provided reference genes

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