Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 1.1e-59 233.0 107 100.0
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 5.8e-58 227.3 107 97.2
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 6.0e-39 164.1 79 91.1
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 3.0e-38 161.8 77 93.5
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 3.3e-37 158.3 104 73.1
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 7.3e-37 157.1 116 64.7
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 1.6e-36 156.0 85 84.7
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 2.1e-36 155.6 120 64.2
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 6.2e-36 154.1 78 89.7
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 8.1e-36 153.7 79 84.8
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 8.1e-36 153.7 77 85.7
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 1.1e-35 153.3 84 84.5
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 1.4e-35 152.9 79 87.3
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 1.4e-35 152.9 95 73.7
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 1.4e-35 152.9 84 82.1
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 1.4e-35 152.9 76 88.2
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 1.8e-35 152.5 84 81.0
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 1.8e-35 152.5 84 81.0
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 1.8e-35 152.5 93 75.3
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 2.4e-35 152.1 79 84.8
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 2.4e-35 152.1 81 82.7
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 2.4e-35 152.1 76 88.2
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 3.1e-35 151.8 76 86.8
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 3.1e-35 151.8 84 83.3
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 3.1e-35 151.8 76 88.2
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 3.1e-35 151.8 113 68.1
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 3.1e-35 151.8 118 64.4
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 4.0e-35 151.4 105 68.6
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 4.0e-35 151.4 76 86.8
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 4.0e-35 151.4 86 79.1
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 5.2e-35 151.0 105 68.6
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 1.2e-34 149.8 84 81.0
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 1.5e-34 149.4 105 67.6
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 2.0e-34 149.1 76 84.2
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 2.0e-34 149.1 97 75.3
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 2.0e-34 149.1 97 75.3
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 2.6e-34 148.7 77 88.3
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 3.4e-34 148.3 76 84.2
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 5.8e-34 147.5 84 81.0
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 5.8e-34 147.5 93 73.1
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 2.9e-33 145.2 74 82.4
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 6.4e-33 144.1 80 83.8
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 7.1e-32 140.6 80 78.8
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 4.6e-31 137.9 82 78.0
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 1.3e-30 136.3 92 69.6
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 1.7e-30 136.0 94 68.1
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 2.3e-30 135.6 81 76.5
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 3.0e-30 135.2 78 78.2
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 3.0e-30 135.2 78 78.2
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 5.1e-30 134.4 99 62.6
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 4.3e-29 131.3 68 82.4
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 7.3e-29 130.6 121 57.9
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 6.2e-28 127.5 85 71.8
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 6.2e-28 127.5 85 71.8
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 8.1e-28 127.1 68 80.9
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 1.4e-27 126.3 84 71.4
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 1.4e-27 126.3 113 61.9
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 5.3e-27 124.4 79 73.4
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 2.6e-26 122.1 81 69.1
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 1.3e-25 119.8 86 62.8
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 8.4e-25 117.1 116 54.3
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 8.4e-25 117.1 80 67.5
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 6.0e-23 110.9 119 54.6
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 1.3e-22 109.8 52 86.5
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 1.8e-22 109.4 77 68.8
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 3.9e-22 108.2 95 61.1
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 1.9e-21 105.9 84 64.3
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 7.4e-21 104.0 61 73.8
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 2.8e-20 102.1 91 53.8
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 6.2e-20 100.9 50 92.0
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 1.1e-19 100.1 45 95.6
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 1.2e-18 96.7 79 62.0
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 3.4e-18 95.1 95 49.5
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 4.5e-18 94.7 46 89.1
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 7.6e-18 94.0 85 60.0
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 1.7e-17 92.8 77 59.7
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 2.2e-17 92.4 76 59.2
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 3.8e-17 91.7 50 86.0
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 1.1e-16 90.1 50 84.0
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 1.9e-16 89.4 107 47.7
arahy.Tifrunner.gnm1.ann1.PC9MZ4 Arachis hypogaea HOM05D007955 ORTHO05D010034 1.1e-13 80.1 43 88.4
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 1.4e-11 73.2 81 49.4
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 4.2e-08 61.6 30 83.3


User provided reference genes

Program Settings