Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.T4B9X4 Arachis hypogaea HOM05D004408 ORTHO05D005486 4.7e-30 134.0 75 100.0
arahy.Tifrunner.gnm1.ann1.4PM453 Arachis hypogaea HOM05D004408 ORTHO05D005486 1.1e-15 86.3 47 97.9
Ca_10066_v3 Cicer arietinum L. HOM05D004408 ORTHO05D005486 2.5e-15 85.1 47 95.7
Glyma.10G159500 Glycine max HOM05D004408 ORTHO05D005486 2.5e-15 85.1 47 95.7
Lalb_Chr06g0167911 Lupinus albus HOM05D004408 ORTHO05D005486 2.5e-15 85.1 47 95.7
VMungo0720G1928 Vigna mungo HOM05D004408 ORTHO05D005486 2.5e-15 85.1 47 95.7
Potri.013G035100 Populus trichocarpa HOM05D004408 ORTHO05D005486 5.5e-15 84.0 47 93.6
Prupe.6G338000 Prunus persica HOM05D004408 ORTHO05D005486 5.5e-15 84.0 47 93.6
Glyma.20G229100 Glycine max HOM05D004408 ORTHO05D005486 7.2e-15 83.6 47 93.6
Phvul.007G184950 Phaseolus vulgaris HOM05D004408 ORTHO05D005486 7.2e-15 83.6 47 93.6
Lj5g0005673 Lotus japonicus HOM05D004408 ORTHO05D005486 9.4e-15 83.2 47 93.6
Lalb_Chr21g0310861 Lupinus albus HOM05D004408 ORTHO05D005486 1.2e-14 82.8 47 93.6
Manes.09G157400 Manihot esculenta HOM05D004408 ORTHO05D005486 1.2e-14 82.8 47 91.5
Medtr1g081710 Medicago truncatula HOM05D004408 ORTHO05D005486 1.2e-14 82.8 47 91.5
Sabra13G0034100 Salix brachista HOM05D004408 ORTHO05D005486 1.2e-14 82.8 47 93.6
GSVIVG01021873001 Vitis vinifera HOM05D004408 ORTHO05D005486 1.6e-14 82.4 47 91.5
CANSAT54G0296 Cannabis sativa HOM05D004408 ORTHO05D005486 2.1e-14 82.0 47 91.5
THA.LOC104818650 Tarenaya hassleriana HOM05D004408 ORTHO05D005486 2.7e-14 81.6 47 91.5
Eucgr.B01725 Eucalyptus grandis HOM05D004408 ORTHO05D005486 3.6e-14 81.3 47 91.5
TAR365G0706 Trochodendron aralioides HOM05D004408 ORTHO05D005486 3.6e-14 81.3 47 89.4
CiPaw.07G007800 Carya illinoinensis HOM05D004408 ORTHO05D005486 4.7e-14 80.9 47 89.4
Dinv05121 Davidia involucrata HOM05D004408 ORTHO05D005486 4.7e-14 80.9 47 89.4
MD04G1218000 Malus domestica HOM05D004408 ORTHO05D005486 4.7e-14 80.9 47 89.4
RcHm_v2.0_Chr3g0461321 Rosa chinensis HOM05D004408 ORTHO05D005486 4.7e-14 80.9 47 89.4
TPR.G11136 Trifolium pratense HOM05D004408 ORTHO05D005486 4.7e-14 80.9 47 89.4
AL6G40140 Arabidopsis lyrata HOM05D004408 ORTHO05D005486 6.1e-14 80.5 47 89.4
AT5G27970 Arabidopsis thaliana HOM05D004408 ORTHO05D005486 6.1e-14 80.5 47 89.4
BcaNung04259 Brassica carinata HOM05D004408 ORTHO05D005486 6.1e-14 80.5 47 89.4
A06p37770 Brassica napus HOM05D004408 ORTHO05D005486 6.1e-14 80.5 47 89.4
C07p40460 Brassica napus HOM05D004408 ORTHO05D005486 6.1e-14 80.5 47 89.4
BolC7t44581H Brassica oleracea HOM05D004408 ORTHO05D005486 6.1e-14 80.5 47 89.4
BraA06t26696Z Brassica rapa HOM05D004408 ORTHO05D005486 6.1e-14 80.5 47 89.4
Cfa006478 Carpinus fangiana HOM05D004408 ORTHO05D005486 6.1e-14 80.5 47 91.5
Thhalv10003510m.g Eutrema salsugineum HOM05D004408 ORTHO05D005486 6.1e-14 80.5 47 89.4
Gohir.A11G256300 Gossypium hirsutum HOM05D004408 ORTHO05D005486 6.1e-14 80.5 47 91.5
Gohir.D11G266000 Gossypium hirsutum HOM05D004408 ORTHO05D005486 6.1e-14 80.5 47 91.5
Gorai.007G286000 Gossypium raimondii HOM05D004408 ORTHO05D005486 6.1e-14 80.5 47 91.5
Sp2g20340 Schrenkiella parvula HOM05D004408 ORTHO05D005486 6.1e-14 80.5 47 89.4
TWI56G0724 Tripterygium wilfordii HOM05D004408 ORTHO05D005486 6.1e-14 80.5 47 89.4
CSS0006895 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 8.0e-14 80.1 47 89.4
CSS0009913 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 8.0e-14 80.1 47 89.4
Duzib177G0039 Durio zibethinus HOM05D004408 ORTHO05D005486 8.0e-14 80.1 47 89.4
QL03p022358 Quercus lobata HOM05D004408 ORTHO05D005486 8.0e-14 80.1 47 89.4
Thecc.05G290600 Theobroma cacao HOM05D004408 ORTHO05D005486 8.0e-14 80.1 47 89.4
ECA232G0933 Erigeron canadensis HOM05D004408 ORTHO05D005486 1.0e-13 79.7 47 87.2
Nitab4.5_0000162g0030 Nicotiana tabacum HOM05D004408 ORTHO05D005486 1.0e-13 79.7 47 87.2
Nitab4.5_0000921g0030 Nicotiana tabacum HOM05D004408 ORTHO05D005486 1.0e-13 79.7 47 87.2
Ciclev10000022m.g Citrus clementina HOM05D004408 ORTHO05D005486 1.4e-13 79.3 47 89.4
FvH4_6g10420 Fragaria vesca HOM05D004408 ORTHO05D005486 1.4e-13 79.3 47 87.2
Atru.chr2.666 Acer truncatum HOM05D004408 ORTHO05D005486 1.8e-13 79.0 47 89.4
COL.COLO4_15257 Corchorus olitorius HOM05D004408 ORTHO05D005486 1.8e-13 79.0 47 87.2
CsaV3_1G039670 Cucumis sativus L. HOM05D004408 ORTHO05D005486 1.8e-13 79.0 47 85.1
Psat6g147800 Pisum sativum HOM05D004408 ORTHO05D005486 2.3e-13 78.6 47 89.4
Nn1g02333 Nelumbo nucifera HOM05D004408 ORTHO05D005486 3.0e-13 78.2 46 89.1
BcaC03g17767 Brassica carinata HOM05D004408 ORTHO05D005486 4.0e-13 77.8 47 87.2
A02p38480 Brassica napus HOM05D004408 ORTHO05D005486 4.0e-13 77.8 47 87.2
C02p57800 Brassica napus HOM05D004408 ORTHO05D005486 4.0e-13 77.8 47 87.2
BraA02t08826Z Brassica rapa HOM05D004408 ORTHO05D005486 4.0e-13 77.8 47 87.2
Cc02_g31380 Coffea canephora HOM05D004408 ORTHO05D005486 4.0e-13 77.8 47 85.1
MELO3C015391.2 Cucumis melo HOM05D004408 ORTHO05D005486 4.0e-13 77.8 47 83.0
HanXRQChr11g0322991 Helianthus annuus HOM05D004408 ORTHO05D005486 4.0e-13 77.8 47 85.1
AUR62000963 Chenopodium quinoa HOM05D004408 ORTHO05D005486 5.2e-13 77.4 47 87.2
Sed0014385 Sechium edule HOM05D004408 ORTHO05D005486 5.2e-13 77.4 47 83.0
Solyc09g018370.4 Solanum lycopersicum HOM05D004408 ORTHO05D005486 5.2e-13 77.4 47 85.1
Sopen09g011530 Solanum pennellii HOM05D004408 ORTHO05D005486 5.2e-13 77.4 47 85.1
Aqoxy2G03396 Aquilegia oxysepala HOM05D004408 ORTHO05D005486 8.8e-13 76.6 47 87.2
Carub.0006s2545 Capsella rubella HOM05D004408 ORTHO05D005486 8.8e-13 76.6 47 85.1
PSO210G7697 Papaver somniferum HOM05D004408 ORTHO05D005486 8.8e-13 76.6 47 83.0
AUR62005003 Chenopodium quinoa HOM05D004408 ORTHO05D005486 1.2e-12 76.3 47 85.1
PSO761G0213 Papaver somniferum HOM05D004408 ORTHO05D005486 1.2e-12 76.3 47 80.9
Hund06994 Selenicereus undatus HOM05D004408 ORTHO05D005486 1.2e-12 76.3 47 83.0
Sc06g0003710 Simmondsia chinensis HOM05D004408 ORTHO05D005486 1.5e-12 75.9 47 85.1
PGR083G2727 Punica granatum HOM05D004408 ORTHO05D005486 2.0e-12 75.5 47 83.0
BolC2t11853H Brassica oleracea HOM05D004408 ORTHO05D005486 2.6e-12 75.1 47 85.1
CAN.G167.11 Capsicum annuum HOM05D004408 ORTHO05D005486 3.4e-12 74.7 47 80.9
Aa31LG11G8830 Aethionema arabicum HOM05D004408 ORTHO05D005486 4.4e-12 74.3 47 87.2
Ah.04g162440 Amaranthus hybridus HOM05D004408 ORTHO05D005486 4.4e-12 74.3 47 83.0
EL10Ac4g09198 Beta vulgaris HOM05D004408 ORTHO05D005486 4.4e-12 74.3 47 83.0
Migut.B01071 Erythranthe guttata HOM05D004408 ORTHO05D005486 4.4e-12 74.3 47 83.0
MSTRG.20441 Avicennia marina HOM05D004408 ORTHO05D005486 5.7e-12 73.9 47 83.0
DCAR_001927 Daucus carota HOM05D004408 ORTHO05D005486 5.7e-12 73.9 47 83.0
BcaB07g34188 Brassica carinata HOM05D004408 ORTHO05D005486 9.7e-12 73.2 48 85.4
SalBow8G3789 Salvia bowleyana HOM05D004408 ORTHO05D005486 1.3e-11 72.8 47 78.7
Rhsim05G0150300 Rhododendron simsii HOM05D004408 ORTHO05D005486 1.7e-11 72.4 66 65.2
Oeu060841.3 Olea europaea HOM05D004408 ORTHO05D005486 2.8e-11 71.6 47 80.9
HPP92_012131 Vanilla planifolia HOM05D004408 ORTHO05D005486 6.3e-11 70.5 48 83.3
SHI08350 Sapria himalayana HOM05D004408 ORTHO05D005486 1.2e-09 66.2 47 72.3
ATR0697G205 Amborella trichopoda HOM05D004408 ORTHO05D005486 2.0e-09 65.5 46 71.7
unitig_0.g2223 Utricularia gibba HOM05D004408 ORTHO05D005486 2.0e-09 65.5 47 74.5
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 5.9e-09 63.9 47 74.5
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 5.9e-09 63.9 47 74.5
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 5.9e-09 63.9 47 74.5
Os01g0772700 Oryza sativa ssp. japonica HOM05D004408 ORTHO05D005486 1.3e-08 62.8 47 68.1
Lsat_1_v5_gn_4_142681 Lactuca sativa HOM05D004408 ORTHO05D005486 3.8e-08 61.2 47 70.2
AagrBONN_evm.TU.Sc2ySwM_228.3627 Anthoceros agrestis HOM05D004408 ORTHO05D005486 2.7e-06 55.1 43 69.8
CBR_g18881 Chara braunii HOM05D004408 ORTHO05D005486 6.1e-06 53.9 46 69.6
Mapoly0167s0007 Marchantia polymorpha HOM05D004408 ORTHO05D005486 8.0e-06 53.5 46 56.5


User provided reference genes

Program Settings