Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.T22GZM Arachis hypogaea HOM05D003613 ORTHO05D004055 3.7e-137 491.5 244 100.0
arahy.Tifrunner.gnm1.ann1.XPM13Z Arachis hypogaea HOM05D003613 ORTHO05D004055 6.1e-39 165.2 82 98.8
Glyma.15G063700 Glycine max HOM05D003613 ORTHO05D004055 2.9e-28 129.8 84 78.6
Glyma.13G250700 Glycine max HOM05D003613 ORTHO05D004055 3.7e-28 129.4 84 78.6
VMungo0540G1949 Vigna mungo HOM05D003613 ORTHO05D004055 4.9e-28 129.0 84 77.4
Phvul.006G195900 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 1.1e-27 127.9 84 77.4
Glyma.01G154800 Glycine max HOM05D003613 ORTHO05D004055 1.2e-26 124.4 84 73.8
Glyma.07G187000 Glycine max HOM05D003613 ORTHO05D004055 6.0e-26 122.1 82 72.0
Glyma.15G176700 Glycine max HOM05D003613 ORTHO05D004055 3.0e-25 119.8 84 72.6
Ciclev10026842m.g Citrus clementina HOM05D003613 ORTHO05D004055 3.9e-25 119.4 83 73.5
Lj6g0025627 Lotus japonicus HOM05D003613 ORTHO05D004055 3.9e-25 119.4 84 69.0
FAN02G4453 Fragaria x ananassa HOM05D003613 ORTHO05D004055 5.0e-25 119.0 80 70.0
Ca_00210_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 8.6e-25 118.2 84 69.0
RcHm_v2.0_Chr2g0131951 Rosa chinensis HOM05D003613 ORTHO05D004055 8.6e-25 118.2 80 70.0
Lalb_Chr16g0383261 Lupinus albus HOM05D003613 ORTHO05D004055 1.5e-24 117.5 85 70.6
Prupe.3G105500 Prunus persica HOM05D003613 ORTHO05D004055 5.6e-24 115.5 83 69.9
CsaV3_7G031790 Cucumis sativus L. HOM05D003613 ORTHO05D004055 2.1e-23 113.6 83 69.9
arahy.Tifrunner.gnm1.ann1.LI0G0T Arachis hypogaea HOM05D003613 ORTHO05D004055 2.8e-23 113.2 73 82.2
arahy.Tifrunner.gnm1.ann1.DB50AT Arachis hypogaea HOM05D003613 ORTHO05D004055 3.6e-23 112.8 86 66.3
CiPaw.01G052100 Carya illinoinensis HOM05D003613 ORTHO05D004055 3.6e-23 112.8 83 67.5
MELO3C029246.2 Cucumis melo HOM05D003613 ORTHO05D004055 3.6e-23 112.8 83 69.9
Lalb_Chr20g0122601 Lupinus albus HOM05D003613 ORTHO05D004055 3.6e-23 112.8 82 65.9
MD09G1229400 Malus domestica HOM05D003613 ORTHO05D004055 3.6e-23 112.8 83 67.5
Atru.chr1.2819 Acer truncatum HOM05D003613 ORTHO05D004055 6.2e-23 112.1 84 67.9
ClCG10G012830 Citrullus lanatus HOM05D003613 ORTHO05D004055 6.2e-23 112.1 84 66.7
CsaV3_3G032670 Cucumis sativus L. HOM05D003613 ORTHO05D004055 6.2e-23 112.1 84 66.7
Medtr2g010880 Medicago truncatula HOM05D003613 ORTHO05D004055 6.2e-23 112.1 84 66.7
Phvul.002G218400 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 6.2e-23 112.1 84 63.1
Potri.003G186400 Populus trichocarpa HOM05D003613 ORTHO05D004055 8.0e-23 111.7 81 65.4
Gohir.A10G049000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.4e-22 110.9 83 66.3
MD17G1228300 Malus domestica HOM05D003613 ORTHO05D004055 1.4e-22 110.9 83 66.3
Potri.001G038750 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.4e-22 110.9 80 65.0
Sed0012530 Sechium edule HOM05D003613 ORTHO05D004055 1.8e-22 110.5 84 66.7
TPR.G32634 Trifolium pratense HOM05D003613 ORTHO05D004055 1.8e-22 110.5 82 65.9
MELO3C024884.2 Cucumis melo HOM05D003613 ORTHO05D004055 2.3e-22 110.2 84 65.5
Lalb_Chr09g0327111 Lupinus albus HOM05D003613 ORTHO05D004055 2.3e-22 110.2 84 69.0
Potri.001G038200 Populus trichocarpa HOM05D003613 ORTHO05D004055 2.3e-22 110.2 80 65.0
arahy.Tifrunner.gnm1.ann1.M9YY7V Arachis hypogaea HOM05D003613 ORTHO05D004055 3.1e-22 109.8 86 66.3
Dinv21437 Davidia involucrata HOM05D003613 ORTHO05D004055 3.1e-22 109.8 85 65.9
Gohir.D10G049600 Gossypium hirsutum HOM05D003613 ORTHO05D004055 3.1e-22 109.8 83 65.1
Gorai.011G053100 Gossypium raimondii HOM05D003613 ORTHO05D004055 3.1e-22 109.8 83 65.1
TWI31G1088 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 5.2e-22 109.0 80 66.2
Haze_15237 Corylus avellana HOM05D003613 ORTHO05D004055 6.8e-22 108.6 83 66.3
Gohir.D06G146000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 6.8e-22 108.6 80 63.8
Gorai.010G170200 Gossypium raimondii HOM05D003613 ORTHO05D004055 6.8e-22 108.6 80 63.8
Manes.11G070600 Manihot esculenta HOM05D003613 ORTHO05D004055 6.8e-22 108.6 81 65.4
Psat1g210880 Pisum sativum HOM05D003613 ORTHO05D004055 6.8e-22 108.6 84 66.7
Sed0006875 Sechium edule HOM05D003613 ORTHO05D004055 6.8e-22 108.6 83 66.3
Haze_16413 Corylus avellana HOM05D003613 ORTHO05D004055 8.9e-22 108.2 83 66.3
Haze_16416 Corylus avellana HOM05D003613 ORTHO05D004055 8.9e-22 108.2 83 66.3
Glyma.08G062200 Glycine max HOM05D003613 ORTHO05D004055 1.2e-21 107.8 83 62.7
Sed0021976 Sechium edule HOM05D003613 ORTHO05D004055 1.2e-21 107.8 83 63.9
TWI75G1756 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 1.2e-21 107.8 80 66.2
Cfa004173 Carpinus fangiana HOM05D003613 ORTHO05D004055 1.5e-21 107.5 83 66.3
ECA247G1662 Erigeron canadensis HOM05D003613 ORTHO05D004055 1.5e-21 107.5 87 62.1
Gohir.A06G141700 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.5e-21 107.5 80 62.5
Duzib235G1294 Durio zibethinus HOM05D003613 ORTHO05D004055 2.0e-21 107.1 83 61.4
Thecc.06G133700 Theobroma cacao HOM05D003613 ORTHO05D004055 2.0e-21 107.1 84 64.3
vmacro19080 Vaccinium macrocarpon HOM05D003613 ORTHO05D004055 2.0e-21 107.1 96 58.3
ClCG09G003430 Citrullus lanatus HOM05D003613 ORTHO05D004055 2.6e-21 106.7 83 66.3
Lalb_Chr19g0125611 Lupinus albus HOM05D003613 ORTHO05D004055 2.6e-21 106.7 83 66.3
Duzib160G0323 Durio zibethinus HOM05D003613 ORTHO05D004055 3.4e-21 106.3 83 61.4
Sabra03G0136400 Salix brachista HOM05D003613 ORTHO05D004055 3.4e-21 106.3 75 65.3
Oeu033454.1 Olea europaea HOM05D003613 ORTHO05D004055 4.4e-21 105.9 97 60.8
HanXRQChr05g0157501 Helianthus annuus HOM05D003613 ORTHO05D004055 1.3e-20 104.4 89 62.9
Oeu051549.1 Olea europaea HOM05D003613 ORTHO05D004055 1.3e-20 104.4 85 64.7
Potri.001G040300 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.7e-20 104.0 80 62.5
GSVIVG01016088001 Vitis vinifera HOM05D003613 ORTHO05D004055 1.7e-20 104.0 85 60.0
DCAR_025611 Daucus carota HOM05D003613 ORTHO05D004055 2.2e-20 103.6 85 58.8
Duzib192G0866 Durio zibethinus HOM05D003613 ORTHO05D004055 2.2e-20 103.6 83 61.4
Peaxi162Scf00195g00118 Petunia axillaris HOM05D003613 ORTHO05D004055 2.2e-20 103.6 114 50.9
TPR.G13916 Trifolium pratense HOM05D003613 ORTHO05D004055 2.9e-20 103.2 82 56.1
HanXRQChr04g0100011 Helianthus annuus HOM05D003613 ORTHO05D004055 4.9e-20 102.4 83 63.9
Manes.04G099000 Manihot esculenta HOM05D003613 ORTHO05D004055 4.9e-20 102.4 82 63.4
COL.COLO4_30901 Corchorus olitorius HOM05D003613 ORTHO05D004055 8.3e-20 101.7 81 59.3
ECA232G3259 Erigeron canadensis HOM05D003613 ORTHO05D004055 8.3e-20 101.7 85 60.0
Sabra03G0136500 Salix brachista HOM05D003613 ORTHO05D004055 1.1e-19 101.3 74 62.2
Eucgr.F03989 Eucalyptus grandis HOM05D003613 ORTHO05D004055 1.4e-19 100.9 85 65.9
Ca_18450_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 1.9e-19 100.5 73 63.0
CAN.G1008.14 Capsicum annuum HOM05D003613 ORTHO05D004055 2.4e-19 100.1 95 53.7
Lsat_1_v5_gn_5_9061 Lactuca sativa HOM05D003613 ORTHO05D004055 2.4e-19 100.1 88 59.1
TAR383G0763 Trochodendron aralioides HOM05D003613 ORTHO05D004055 4.1e-19 99.4 78 62.8
MSTRG.9389 Avicennia marina HOM05D003613 ORTHO05D004055 7.0e-19 98.6 85 61.2
Cc04_g05380 Coffea canephora HOM05D003613 ORTHO05D004055 7.0e-19 98.6 85 58.8
ECA246G2284 Erigeron canadensis HOM05D003613 ORTHO05D004055 7.0e-19 98.6 88 61.4
QL12p003368 Quercus lobata HOM05D003613 ORTHO05D004055 7.0e-19 98.6 82 65.9
SGA_v2.0_scaffold74G24606 Striga asiatica HOM05D003613 ORTHO05D004055 7.0e-19 98.6 110 52.7
MSTRG.22838 Avicennia marina HOM05D003613 ORTHO05D004055 9.2e-19 98.2 85 58.8
Nn8g40130 Nelumbo nucifera HOM05D003613 ORTHO05D004055 1.6e-18 97.4 85 60.0
Cpa.g.sc68.45 Carica papaya HOM05D003613 ORTHO05D004055 2.1e-18 97.1 84 59.5
Rhsim08G0202400 Rhododendron simsii HOM05D003613 ORTHO05D004055 2.1e-18 97.1 80 58.8
SalBow1G4637 Salvia bowleyana HOM05D003613 ORTHO05D004055 2.1e-18 97.1 100 57.0
THA.LOC104813597 Tarenaya hassleriana HOM05D003613 ORTHO05D004055 2.7e-18 96.7 83 59.0
FvH4_6g28090 Fragaria vesca HOM05D008004 ORTHO05D011218 3.5e-18 96.3 63 73.0
FAN14G0884 Fragaria x ananassa HOM05D008004 ORTHO05D004055 3.5e-18 96.3 63 73.0
Migut.D01149 Erythranthe guttata HOM05D003613 ORTHO05D004055 6.0e-18 95.5 96 57.3
MSTRG.11218 Avicennia marina HOM05D003613 ORTHO05D004055 7.8e-18 95.1 85 57.6
Nitab4.5_0005437g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 7.8e-18 95.1 98 55.1
unitig_22.g6276 Utricularia gibba HOM05D003613 ORTHO05D004055 7.8e-18 95.1 85 55.3
Lsat_1_v5_gn_4_84900 Lactuca sativa HOM05D003613 ORTHO05D004055 1.0e-17 94.7 85 57.6
Os08g0266200 Oryza sativa ssp. japonica HOM05D003613 ORTHO05D004055 1.0e-17 94.7 101 50.5
Sopen03g036670 Solanum pennellii HOM05D003613 ORTHO05D004055 1.0e-17 94.7 95 52.6
PGSC0003DMG400014217 Solanum tuberosum HOM05D003613 ORTHO05D004055 1.0e-17 94.7 95 52.6
PGSC0003DMG400014438 Solanum tuberosum HOM05D003613 ORTHO05D004055 1.0e-17 94.7 80 61.2
Aqoxy5G00706 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 1.3e-17 94.4 88 55.7
CSS0042010 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 1.3e-17 94.4 80 60.0
Rhsim12G0183300 Rhododendron simsii HOM05D003613 ORTHO05D004055 1.3e-17 94.4 76 60.5
Nitab4.5_0002700g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 1.7e-17 94.0 94 55.3
SGA_v2.0_scaffold515G52657 Striga asiatica HOM05D003613 ORTHO05D004055 1.7e-17 94.0 68 69.1
unitig_8.g3041 Utricularia gibba HOM05D003613 ORTHO05D004055 1.7e-17 94.0 96 52.1
Solyc12g042540.1 Solanum lycopersicum HOM05D003613 ORTHO05D004055 2.3e-17 93.6 79 59.5
Potri.001G039700 Populus trichocarpa HOM05D003613 ORTHO05D004055 3.0e-17 93.2 71 60.6
Migut.I00632 Erythranthe guttata HOM05D003613 ORTHO05D004055 3.9e-17 92.8 68 67.6
QL10p043081 Quercus lobata HOM05D003613 ORTHO05D004055 3.9e-17 92.8 82 62.2
Sopen12g021630 Solanum pennellii HOM05D003613 ORTHO05D004055 5.1e-17 92.4 79 59.5
AL1G28300 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 1.5e-16 90.9 70 65.7
Carub.0002s2654 Capsella rubella HOM05D003613 ORTHO05D004055 1.5e-16 90.9 84 54.8
CARHR073400 Cardamine hirsuta HOM05D003613 ORTHO05D004055 1.5e-16 90.9 87 58.6
Sp5g34740 Schrenkiella parvula HOM05D003613 ORTHO05D004055 1.5e-16 90.9 84 54.8
Thhalv10019378m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 2.5e-16 90.1 84 53.6
Lj4g0025384 Lotus japonicus HOM05D003613 ORTHO05D004055 3.3e-16 89.7 82 57.3
MBI14_g16433_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 3.3e-16 89.7 82 56.1
AT1G79660 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 5.6e-16 89.0 84 52.4
Sp1g14410 Schrenkiella parvula HOM05D003613 ORTHO05D004055 7.3e-16 88.6 85 60.0
Actinidia36859 Actinidia chinensis HOM05D000338 ORTHO05D003721 9.5e-16 88.2 96 45.8
AL2G40350 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 9.5e-16 88.2 87 51.7
BcaB03g14503 Brassica carinata HOM05D003613 ORTHO05D004055 9.5e-16 88.2 81 60.5
C08p44600 Brassica napus HOM05D003613 ORTHO05D004055 9.5e-16 88.2 81 60.5
BolC8t52006H Brassica oleracea HOM05D003613 ORTHO05D004055 9.5e-16 88.2 81 60.5
A06p12110 Brassica napus HOM05D003613 ORTHO05D004055 2.8e-15 86.7 70 65.7
BraA06t24380Z Brassica rapa HOM05D003613 ORTHO05D004055 2.8e-15 86.7 70 65.7
A09p61000 Brassica napus HOM05D003613 ORTHO05D004055 3.6e-15 86.3 81 59.3
BraA09t41473Z Brassica rapa HOM05D003613 ORTHO05D004055 3.6e-15 86.3 81 59.3
Thhalv10009201m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 3.6e-15 86.3 85 57.6
Aa31LG7G710 Aethionema arabicum HOM05D003613 ORTHO05D004055 4.7e-15 85.9 84 54.8
ATR0580G444 Amborella trichopoda HOM05D003613 ORTHO05D004055 8.1e-15 85.1 78 50.0
DCAR_021377 Daucus carota HOM05D003613 ORTHO05D004055 8.1e-15 85.1 86 50.0
SEGI_37804 Sequoiadendron giganteum HOM05D003613 ORTHO05D004055 8.1e-15 85.1 80 53.8
AT1G16170 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 1.1e-14 84.7 83 59.0
BcaC08g47524 Brassica carinata HOM05D003613 ORTHO05D004055 1.1e-14 84.7 82 51.2
Aa31LG4G1310 Aethionema arabicum HOM05D003613 ORTHO05D004055 1.4e-14 84.3 76 56.6
MBI15_g26076_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 1.4e-14 84.3 83 56.6
BcaB02g06598 Brassica carinata HOM05D003613 ORTHO05D004055 2.3e-14 83.6 70 62.9
CARHR016650 Cardamine hirsuta HOM05D003613 ORTHO05D004055 2.3e-14 83.6 69 63.8
Carub.0001s1593 Capsella rubella HOM05D003613 ORTHO05D004055 3.1e-14 83.2 69 62.3
A07p44660 Brassica napus HOM05D003613 ORTHO05D004055 5.2e-14 82.4 82 51.2
BraA07t31975Z Brassica rapa HOM05D003613 ORTHO05D004055 5.2e-14 82.4 82 51.2
Ah.12g055300 Amaranthus hybridus HOM05D003613 ORTHO05D004055 6.8e-14 82.0 84 57.1
BcaC08g47525 Brassica carinata HOM05D003613 ORTHO05D004055 8.9e-14 81.6 82 51.2
BolC6t40365H Brassica oleracea HOM05D003613 ORTHO05D004055 8.9e-14 81.6 82 51.2
EL10Ac5g12047 Beta vulgaris HOM05D003613 ORTHO05D004055 1.5e-13 80.9 75 58.7
Gohir.D09G076100 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.5e-13 80.9 88 51.1
ATR0068G040 Amborella trichopoda HOM05D003613 ORTHO05D004055 2.6e-13 80.1 78 48.7
BolC5t30160H Brassica oleracea HOM05D003613 ORTHO05D004055 3.4e-13 79.7 69 60.9
Gohir.A09G076160 Gossypium hirsutum HOM05D003613 ORTHO05D004055 3.4e-13 79.7 88 51.1
Gorai.006G091300 Gossypium raimondii HOM05D003613 ORTHO05D004055 3.4e-13 79.7 88 51.1
AUR62018676 Chenopodium quinoa HOM05D003613 ORTHO05D004055 5.8e-13 79.0 84 52.4
Zm00001eb177920 Zea mays HOM05D003613 ORTHO05D004055 5.8e-13 79.0 77 54.5
Nn2g12477 Nelumbo nucifera HOM05D003613 ORTHO05D004055 7.5e-13 78.6 81 53.1
SHI11349 Sapria himalayana HOM05D003613 ORTHO05D004055 7.5e-13 78.6 63 60.3
Pp3c10_10840 Physcomitrium patens HOM05D003613 ORTHO05D004055 1.3e-12 77.8 95 46.3
BcaC05g25604 Brassica carinata HOM05D003613 ORTHO05D004055 2.2e-12 77.0 69 59.4
arahy.Tifrunner.gnm1.ann1.EW42QP Arachis hypogaea HOM05D000005 ORTHO05D000012 2.9e-12 76.6 87 50.6
C05p14290 Brassica napus HOM05D003613 ORTHO05D004055 2.9e-12 76.6 69 59.4
Zm00001eb412000 Zea mays HOM05D003613 ORTHO05D004055 3.7e-12 76.3 78 55.1
TAR626G0045 Trochodendron aralioides HOM05D003147 ORTHO05D004055 2.4e-11 73.6 75 53.3
BcaC07g38803 Brassica carinata HOM05D003613 ORTHO05D004055 9.2e-11 71.6 70 57.1
C08p17390 Brassica napus HOM05D003613 ORTHO05D004055 9.2e-11 71.6 70 57.1
BolC8t49365H Brassica oleracea HOM05D003613 ORTHO05D004055 9.2e-11 71.6 70 57.1
Pp3c14_25540 Physcomitrium patens HOM05D003613 ORTHO05D004055 1.6e-10 70.9 70 54.3
BcaB03g13047 Brassica carinata HOM05D003613 ORTHO05D004055 2.7e-10 70.1 70 57.1
A08p31400 Brassica napus HOM05D003613 ORTHO05D004055 1.3e-09 67.8 70 55.7
BraA08t35063Z Brassica rapa HOM05D003613 ORTHO05D004055 1.3e-09 67.8 70 55.7
BcaC03g14996 Brassica carinata HOM05D003613 ORTHO05D004055 1.7e-09 67.4 54 66.7
C02p25300 Brassica napus HOM05D003613 ORTHO05D004055 1.7e-09 67.4 54 66.7
BolC2t08604H Brassica oleracea HOM05D003613 ORTHO05D004055 1.7e-09 67.4 54 66.7
CSS0016880 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 5.1e-09 65.9 70 47.1
BcaC03g17203 Brassica carinata HOM05D003613 ORTHO05D004055 1.1e-08 64.7 52 67.3
BolC2t11219H Brassica oleracea HOM05D003613 ORTHO05D004055 1.1e-08 64.7 52 67.3
BolC8t51544H Brassica oleracea HOM05D003613 ORTHO05D004055 4.3e-08 62.8 51 66.7
AagrBONN_evm.TU.Sc2ySwM_368.2820 Anthoceros agrestis HOM05D003613 ORTHO05D004055 5.6e-08 62.4 95 40.0
C08p39730 Brassica napus HOM05D003613 ORTHO05D004055 9.5e-08 61.6 52 63.5
Mapoly0033s0168 Marchantia polymorpha HOM05D000087 ORTHO05D255883 1.2e-07 61.2 74 44.6
arahy.Tifrunner.gnm1.ann1.TQP87P Arachis hypogaea HOM05D000005 ORTHO05D085855 1.6e-07 60.8 63 55.6
SMO001G0027 Selaginella moellendorffii HOM05D003613 ORTHO05D004055 2.1e-07 60.5 52 53.8
SMO307G0037 Selaginella moellendorffii HOM05D000818 ORTHO05D004055 2.1e-07 60.5 52 53.8
DCAR_021376 Daucus carota HOM05D003613 ORTHO05D004055 8.1e-07 58.5 72 45.8


User provided reference genes

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