Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.T0VGDI Arachis hypogaea HOM05D000568 ORTHO05D015435 2.4e-103 379.0 213 100.0
arahy.Tifrunner.gnm1.ann1.FMR26E Arachis hypogaea HOM05D000568 ORTHO05D003200 5.9e-62 241.5 191 79.6
arahy.Tifrunner.gnm1.ann1.UBL83T Arachis hypogaea HOM05D000568 ORTHO05D003200 1.0e-61 240.7 189 77.2
arahy.Tifrunner.gnm1.ann1.GT4GNB Arachis hypogaea HOM05D000568 ORTHO05D003200 1.7e-61 240.0 163 87.1
arahy.Tifrunner.gnm1.ann1.9WI7GI Arachis hypogaea HOM05D000568 ORTHO05D003200 3.8e-61 238.8 163 85.9
arahy.Tifrunner.gnm1.ann1.IMB0BX Arachis hypogaea HOM05D000568 ORTHO05D003200 3.9e-58 228.8 163 85.9
arahy.Tifrunner.gnm1.ann1.JPE2T4 Arachis hypogaea HOM05D000568 ORTHO05D003200 1.1e-57 227.3 163 82.8
arahy.Tifrunner.gnm1.ann1.4047RD Arachis hypogaea HOM05D000568 ORTHO05D003200 4.0e-50 202.2 163 66.9
arahy.Tifrunner.gnm1.ann1.K799TH Arachis hypogaea HOM05D000568 ORTHO05D003200 1.8e-42 176.8 162 74.1
arahy.Tifrunner.gnm1.ann1.M7VI42 Arachis hypogaea HOM05D000568 ORTHO05D003200 1.8e-42 176.8 125 85.6
arahy.Tifrunner.gnm1.ann1.JS71GY Arachis hypogaea HOM05D000568 ORTHO05D003200 4.4e-41 172.2 123 92.7
arahy.Tifrunner.gnm1.ann1.FZ17FK Arachis hypogaea HOM05D000568 ORTHO05D003200 2.2e-40 169.9 163 60.1
arahy.Tifrunner.gnm1.ann1.3LKU2S Arachis hypogaea HOM05D000568 ORTHO05D003200 1.6e-38 163.7 152 72.4
arahy.Tifrunner.gnm1.ann1.J2UR9X Arachis hypogaea HOM05D000568 ORTHO05D003200 1.8e-34 150.2 118 69.5
arahy.Tifrunner.gnm1.ann1.SUW3ZA Arachis hypogaea HOM05D000568 ORTHO05D003200 6.8e-34 148.3 110 84.5
arahy.Tifrunner.gnm1.ann1.3TBG7Q Arachis hypogaea HOM05D013656 ORTHO05D015435 4.7e-19 99.0 52 94.2
arahy.Tifrunner.gnm1.ann1.MM94I9 Arachis hypogaea HOM05D000568 ORTHO05D003200 1.0e-18 97.8 110 50.0
Phvul.009G169600 Phaseolus vulgaris HOM05D000568 ORTHO05D003200 8.9e-18 94.7 176 43.2
arahy.Tifrunner.gnm1.ann1.6WF1IF Arachis hypogaea HOM05D000568 ORTHO05D003200 5.8e-17 92.0 123 60.2
Glyma.06G173700 Glycine max HOM05D000568 ORTHO05D003200 7.8e-14 81.6 97 49.5
VMungo1309G1691 Vigna mungo HOM05D000568 ORTHO05D003200 1.1e-12 77.8 161 40.4
Ca_16096_v3 Cicer arietinum L. HOM05D000568 ORTHO05D003200 9.5e-12 74.7 164 39.0
Ca_30075_v3 Cicer arietinum L. HOM05D000568 ORTHO05D003200 9.5e-12 74.7 164 39.0
arahy.Tifrunner.gnm1.ann1.S50S0B Arachis hypogaea HOM05D000568 ORTHO05D003200 1.6e-11 73.9 163 34.4
Glyma.04G192100 Glycine max HOM05D000568 ORTHO05D003200 1.6e-11 73.9 104 46.2
Lj1g0028025 Lotus japonicus HOM05D000568 ORTHO05D003200 1.6e-11 73.9 104 43.3
Medtr3g075190 Medicago truncatula HOM05D000568 ORTHO05D003200 1.1e-10 71.2 99 41.4
arahy.Tifrunner.gnm1.ann1.9GY8Y8 Arachis hypogaea HOM05D000568 ORTHO05D003200 3.1e-10 69.7 161 32.9
Ca_05568_v3 Cicer arietinum L. HOM05D000568 ORTHO05D003200 4.0e-10 69.3 180 45.0
Glyma.17G126800 Glycine max HOM05D000568 ORTHO05D003200 2.6e-09 66.6 173 39.3
Ca_22691_v3 Cicer arietinum L. HOM05D013656 ORTHO05D015435 7.5e-09 65.1 48 62.5
Psat4g119000 Pisum sativum HOM05D013656 ORTHO05D015435 7.5e-09 65.1 53 64.2
Glyma.05G044300 Glycine max HOM05D000568 ORTHO05D003200 1.3e-08 64.3 168 42.3
Lalb_Chr12g0202081 Lupinus albus HOM05D000568 ORTHO05D003200 2.9e-08 63.2 169 35.5
CiPaw.11G013100 Carya illinoinensis HOM05D000568 ORTHO05D003200 3.7e-08 62.8 51 51.0
Lalb_Chr17g0341561 Lupinus albus HOM05D013656 ORTHO05D015435 4.9e-08 62.4 54 51.9
Potri.015G089100 Populus trichocarpa HOM05D000568 ORTHO05D003200 4.9e-08 62.4 53 49.1
CANSAT80G2497 Cannabis sativa HOM05D000568 ORTHO05D003200 6.4e-08 62.0 47 55.3
Lj4g0012486 Lotus japonicus HOM05D000568 ORTHO05D003200 6.4e-08 62.0 192 38.5
Sabra12G0067200 Salix brachista HOM05D000568 ORTHO05D003200 6.4e-08 62.0 64 45.3
Sabra15G0111800 Salix brachista HOM05D000568 ORTHO05D003200 8.3e-08 61.6 41 53.7
VMungo1215G3297 Vigna mungo HOM05D000568 ORTHO05D003200 1.4e-07 60.8 173 32.4
Psat4g064560 Pisum sativum HOM05D000568 ORTHO05D003200 1.9e-07 60.5 201 33.3
Prupe.5G159100 Prunus persica HOM05D000568 ORTHO05D003200 2.4e-07 60.1 53 45.3
Manes.14G055800 Manihot esculenta HOM05D000568 ORTHO05D003200 3.2e-07 59.7 56 41.1
TPR.G37533 Trifolium pratense HOM05D000568 ORTHO05D003200 3.2e-07 59.7 229 34.9
Actinidia16196 Actinidia chinensis HOM05D000568 ORTHO05D003200 4.1e-07 59.3 57 49.1
GSVIVG01007563001 Vitis vinifera HOM05D000568 ORTHO05D003200 4.1e-07 59.3 62 46.8
Phvul.003G207900 Phaseolus vulgaris HOM05D000568 ORTHO05D003200 5.4e-07 58.9 153 41.2
Potri.012G092500 Populus trichocarpa HOM05D000568 ORTHO05D003200 5.4e-07 58.9 56 48.2
BcaNung06575 Brassica carinata HOM05D000568 ORTHO05D003200 7.1e-07 58.5 42 50.0
BcaNung06576 Brassica carinata HOM05D000568 ORTHO05D003200 7.1e-07 58.5 42 50.0
Duzib147G0413 Durio zibethinus HOM05D000568 ORTHO05D003200 7.1e-07 58.5 34 64.7
Actinidia19377 Actinidia chinensis HOM05D000568 ORTHO05D003200 9.2e-07 58.2 46 52.2
Psat5g141360 Pisum sativum HOM05D000568 ORTHO05D003200 1.2e-06 57.8 157 34.4
PGR083G1817 Punica granatum HOM05D000568 ORTHO05D003200 1.2e-06 57.8 60 46.7
CsaV3_1G009210 Cucumis sativus L. HOM05D000568 ORTHO05D003200 1.6e-06 57.4 34 67.6
Gohir.D12G190550 Gossypium hirsutum HOM05D000568 ORTHO05D003200 1.6e-06 57.4 59 40.7
Gorai.008G204400 Gossypium raimondii HOM05D000568 ORTHO05D003200 1.6e-06 57.4 59 40.7
Sed0010716 Sechium edule HOM05D000568 ORTHO05D003200 1.6e-06 57.4 39 59.0
CSS0047511 Camellia sinensis var. sinensis HOM05D000568 ORTHO05D003200 2.1e-06 57.0 57 47.4
Dinv38482 Davidia involucrata HOM05D000568 ORTHO05D003200 2.1e-06 57.0 46 50.0
Medtr8g066030 Medicago truncatula HOM05D013656 ORTHO05D015435 2.1e-06 57.0 49 59.2
QL10p005500 Quercus lobata HOM05D000568 ORTHO05D003200 2.1e-06 57.0 58 43.1
vmacro16700 Vaccinium macrocarpon HOM05D000568 ORTHO05D003200 2.1e-06 57.0 46 52.2
Atru.chr9.997 Acer truncatum HOM05D000568 ORTHO05D003200 2.7e-06 56.6 46 50.0
CiPaw.12G034800 Carya illinoinensis HOM05D000568 ORTHO05D003200 2.7e-06 56.6 32 65.6
Lsat_1_v5_gn_4_76400 Lactuca sativa HOM05D000568 ORTHO05D003200 2.7e-06 56.6 58 37.9
Lj2g0011474 Lotus japonicus HOM05D013656 ORTHO05D015435 2.7e-06 56.6 56 58.9
MD06G1159200 Malus domestica HOM05D000568 ORTHO05D003200 2.7e-06 56.6 38 52.6
Medtr4g104260 Medicago truncatula HOM05D000568 ORTHO05D003200 2.7e-06 56.6 231 35.1
Prupe.5G159000 Prunus persica HOM05D000568 ORTHO05D003200 2.7e-06 56.6 44 50.0
SalBow1G0558 Salvia bowleyana HOM05D000568 ORTHO05D003200 3.5e-06 56.2 71 36.6
Actinidia16197 Actinidia chinensis HOM05D000568 ORTHO05D003200 6.0e-06 55.5 57 42.1
Ciclev10019979m.g Citrus clementina HOM05D000568 ORTHO05D003200 6.0e-06 55.5 36 55.6
Gohir.A07G053900 Gossypium hirsutum HOM05D000568 ORTHO05D003200 6.0e-06 55.5 31 61.3
Gohir.D07G058300 Gossypium hirsutum HOM05D000568 ORTHO05D003200 6.0e-06 55.5 31 61.3
Gorai.001G061800 Gossypium raimondii HOM05D000568 ORTHO05D003200 6.0e-06 55.5 31 61.3
Prupe.5G158300 Prunus persica HOM05D000568 ORTHO05D003200 6.0e-06 55.5 32 62.5
Sed0021120 Sechium edule HOM05D000568 ORTHO05D003200 6.0e-06 55.5 34 61.8
VMungo1215G3123 Vigna mungo HOM05D013656 ORTHO05D015435 6.0e-06 55.5 36 69.4
Haze_07286 Corylus avellana HOM05D000568 ORTHO05D003200 7.8e-06 55.1 45 51.1
ECA232G1415 Erigeron canadensis HOM05D000568 ORTHO05D003200 7.8e-06 55.1 40 55.0
Eucgr.B00161 Eucalyptus grandis HOM05D000568 ORTHO05D003200 7.8e-06 55.1 53 43.4
Thecc.04G026900 Theobroma cacao HOM05D000568 ORTHO05D003200 7.8e-06 55.1 33 66.7


User provided reference genes

Program Settings