Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SXI33E Arachis hypogaea HOM05D003171 ORTHO05D000921 4.5e-68 261.2 134 100.0
arahy.Tifrunner.gnm1.ann1.QX6E0G Arachis hypogaea HOM05D008473 ORTHO05D000921 4.6e-36 154.8 120 70.8
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 4.7e-25 118.2 123 55.3
Lj6g0024631 Lotus japonicus HOM05D003171 ORTHO05D000921 1.1e-24 117.1 123 54.5
Lj6g0011077 Lotus japonicus HOM05D003171 ORTHO05D000921 3.4e-23 112.1 123 53.7
Glyma.17G029100 Glycine max HOM05D003171 ORTHO05D000921 5.8e-23 111.3 125 52.8
Glyma.02G173400 Glycine max HOM05D003171 ORTHO05D000921 2.3e-19 99.4 111 55.0
Lj5g0008420 Lotus japonicus HOM05D003171 ORTHO05D000921 2.8e-17 92.4 91 56.0
arahy.Tifrunner.gnm1.ann1.PZ3VRY Arachis hypogaea HOM05D000599 ORTHO05D000554 2.3e-16 89.4 81 60.5
Hma1.2p1_0471F.1_g159430 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 2.6e-15 85.9 129 42.6
Hma1.2p1_1940F.1_g308350 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 1.7e-14 83.2 122 43.4
Oeu059221.1 Olea europaea HOM05D003171 ORTHO05D000921 1.6e-12 76.6 119 42.9
Oeu046730.1 Olea europaea HOM05D003171 ORTHO05D000921 4.6e-12 75.1 139 36.7
Aqoxy5G02246 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 7.8e-12 74.3 100 45.0
Oeu052247.2 Olea europaea HOM05D003171 ORTHO05D000921 7.8e-12 74.3 122 41.0
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 1.0e-11 73.9 118 37.3
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 2.3e-11 72.8 100 44.0
Oeu059139.1 Olea europaea HOM05D003171 ORTHO05D000921 1.9e-10 69.7 120 40.0
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 1.9e-10 69.7 127 38.6
Potri.017G120900 Populus trichocarpa HOM05D003171 ORTHO05D000921 3.3e-10 68.9 121 39.7
Ciclev10013577m.g Citrus clementina HOM05D003171 ORTHO05D000921 7.3e-10 67.8 119 37.0
Oeu010697.1 Olea europaea HOM05D003171 ORTHO05D000921 9.6e-10 67.4 124 37.9
COL.COLO4_15868 Corchorus olitorius HOM05D003171 ORTHO05D000921 2.1e-09 66.2 125 36.8
Sabra17G0100000 Salix brachista HOM05D003171 ORTHO05D000921 3.6e-09 65.5 122 39.3
Sabra17G0103300 Salix brachista HOM05D003171 ORTHO05D000921 3.6e-09 65.5 122 39.3
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 4.7e-09 65.1 125 34.4
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 4.7e-09 65.1 125 34.4
Hma1.2p1_0279F.1_g112360 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 1.4e-08 63.5 115 40.9
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 1.4e-08 63.5 101 38.6
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 1.4e-08 63.5 136 35.3
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 1.8e-08 63.2 136 35.3
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 1.8e-08 63.2 136 35.3
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 1.8e-08 63.2 136 35.3
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 1.8e-08 63.2 136 35.3
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 3.1e-08 62.4 115 39.1
Ciclev10006620m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.1e-08 62.4 126 35.7
Dinv33374 Davidia involucrata HOM05D008473 ORTHO05D000921 3.1e-08 62.4 100 37.0
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 3.1e-08 62.4 137 31.4
Prupe.8G117400 Prunus persica HOM05D003171 ORTHO05D000921 3.1e-08 62.4 91 38.5
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 4.0e-08 62.0 122 36.1
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 5.2e-08 61.6 125 32.8
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 6.8e-08 61.2 119 37.0
Lsat_1_v5_gn_9_41001 Lactuca sativa HOM05D003171 ORTHO05D000921 6.8e-08 61.2 93 40.9
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 6.8e-08 61.2 136 34.6
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 8.9e-08 60.8 136 34.6
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.5e-07 60.1 115 34.8
Lsat_1_v5_gn_1_68500 Lactuca sativa HOM05D003171 ORTHO05D000921 2.0e-07 59.7 100 38.0
Ciclev10033416m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.6e-07 59.3 107 34.6
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 2.6e-07 59.3 117 36.8
Ciclev10024555m.g Citrus clementina HOM05D003171 ORTHO05D000921 5.8e-07 58.2 125 33.6
Prupe.6G193000 Prunus persica HOM05D003171 ORTHO05D000921 5.8e-07 58.2 112 34.8
TWI63G0719 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 5.8e-07 58.2 114 35.1
Lsat_1_v5_gn_8_44140 Lactuca sativa HOM05D003171 ORTHO05D000921 9.9e-07 57.4 100 37.0
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 2.2e-06 56.2 113 34.5
FvH4_4g13820 Fragaria vesca HOM05D003171 ORTHO05D000921 3.8e-06 55.5 119 35.3
FAN03G0665 Fragaria x ananassa HOM05D003171 ORTHO05D000921 4.9e-06 55.1 119 33.6


User provided reference genes

Program Settings