Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SX57NQ Arachis hypogaea HOM05D003988 ORTHO05D014448 6.6e-79 297.4 155 100.0
arahy.Tifrunner.gnm1.ann1.AVNN4W Arachis hypogaea HOM05D003988 ORTHO05D014448 3.0e-31 139.0 77 94.8
arahy.Tifrunner.gnm1.ann1.85H8L7 Arachis hypogaea HOM05D003988 ORTHO05D014448 2.8e-29 132.5 77 93.5
arahy.Tifrunner.gnm1.ann1.SQ63RV Arachis hypogaea HOM05D003988 ORTHO05D014448 2.4e-28 129.4 75 92.0
arahy.Tifrunner.gnm1.ann1.1BPS4M Arachis hypogaea HOM05D003988 ORTHO05D004688 2.6e-27 125.9 71 88.7
arahy.Tifrunner.gnm1.ann1.41MGIJ Arachis hypogaea HOM05D003988 ORTHO05D004688 2.6e-27 125.9 71 88.7
Lalb_Chr24g0397841 Lupinus albus HOM05D003988 ORTHO05D004688 3.8e-26 122.1 73 79.5
Glyma.07G092400 Glycine max HOM05D003988 ORTHO05D004688 3.2e-25 119.0 76 77.6
Glyma.09G183800 Glycine max HOM05D003988 ORTHO05D004688 3.2e-25 119.0 76 77.6
Lalb_Chr14g0371121 Lupinus albus HOM05D003988 ORTHO05D004688 4.2e-25 118.6 71 78.9
Ca_25488_v3 Cicer arietinum L. HOM05D003988 ORTHO05D004688 7.1e-25 117.9 71 80.3
Lj2g0015725 Lotus japonicus HOM05D003988 ORTHO05D004688 2.1e-24 116.3 71 80.3
arahy.Tifrunner.gnm1.ann1.FSD85R Arachis hypogaea HOM05D003988 ORTHO05D014448 2.7e-24 115.9 83 78.3
Medtr6g084400 Medicago truncatula HOM05D003988 ORTHO05D004688 2.7e-24 115.9 71 78.9
TPR.G15165 Trifolium pratense HOM05D003988 ORTHO05D004688 2.7e-24 115.9 76 75.0
Psat1g037240 Pisum sativum HOM05D003988 ORTHO05D004688 3.5e-24 115.5 71 78.9
Phvul.004G156400 Phaseolus vulgaris HOM05D003988 ORTHO05D004688 7.9e-24 114.4 71 78.9
VMungo0464G1409 Vigna mungo HOM05D003988 ORTHO05D004688 7.9e-24 114.4 71 78.9
Lalb_Chr22g0353111 Lupinus albus HOM05D003988 ORTHO05D004688 3.9e-23 112.1 71 74.6
arahy.Tifrunner.gnm1.ann1.A1L0XC Arachis hypogaea HOM05D003988 ORTHO05D004688 1.1e-22 110.5 76 68.4
arahy.Tifrunner.gnm1.ann1.XMAM92 Arachis hypogaea HOM05D003988 ORTHO05D004688 1.1e-22 110.5 76 68.4
Psat1g126120 Pisum sativum HOM05D003988 ORTHO05D004688 1.5e-22 110.2 71 78.9
Sed0017030 Sechium edule HOM05D003988 ORTHO05D004688 4.3e-22 108.6 74 68.9
CANSAT80G2599 Cannabis sativa HOM05D003988 ORTHO05D004688 5.7e-22 108.2 74 68.9
Cpa.g.sc3.506 Carica papaya HOM05D003988 ORTHO05D004688 9.6e-22 107.5 74 67.6
Os01g0128800 Oryza sativa ssp. japonica HOM05D003988 ORTHO05D004688 1.3e-21 107.1 75 64.0
PGR044G0911 Punica granatum HOM05D003988 ORTHO05D004688 1.3e-21 107.1 71 69.0
Prupe.5G221900 Prunus persica HOM05D003988 ORTHO05D004688 1.6e-21 106.7 74 68.9
FAN04G0415 Fragaria x ananassa HOM05D003988 ORTHO05D004688 3.7e-21 105.5 74 67.6
FAN13G2567 Fragaria x ananassa HOM05D003988 ORTHO05D004688 3.7e-21 105.5 74 67.6
Potri.012G056000 Populus trichocarpa HOM05D003988 ORTHO05D004688 6.2e-21 104.8 68 72.1
FvH4_5g12040 Fragaria vesca HOM05D003988 ORTHO05D004688 1.1e-20 104.0 74 66.2
FAN18G4152 Fragaria x ananassa HOM05D003988 ORTHO05D004688 1.1e-20 104.0 74 66.2
FAN18G4386 Fragaria x ananassa HOM05D003988 ORTHO05D004688 1.1e-20 104.0 74 66.2
MD06G1216700 Malus domestica HOM05D003988 ORTHO05D004688 1.1e-20 104.0 74 68.9
Hma1.2p1_0653F.1_g196250 Hydrangea macrophylla HOM05D003988 ORTHO05D004688 1.4e-20 103.6 76 64.5
MD14G1227200 Malus domestica HOM05D003988 ORTHO05D004688 1.4e-20 103.6 74 68.9
TAR629G2028 Trochodendron aralioides HOM05D003988 ORTHO05D004688 1.4e-20 103.6 74 62.2
Sabra15G0039000 Salix brachista HOM05D003988 ORTHO05D004688 1.8e-20 103.2 68 70.6
Dinv28109 Davidia involucrata HOM05D003988 ORTHO05D004688 3.1e-20 102.4 74 63.5
Rhsim12G0143000 Rhododendron simsii HOM05D003988 ORTHO05D004688 3.1e-20 102.4 71 63.4
RcHm_v2.0_Chr7g0185511 Rosa chinensis HOM05D003988 ORTHO05D004688 3.1e-20 102.4 74 64.9
vmacro16441 Vaccinium macrocarpon HOM05D003988 ORTHO05D004688 3.1e-20 102.4 71 63.4
TWI81G0944 Tripterygium wilfordii HOM05D003988 ORTHO05D004688 4.0e-20 102.1 74 64.9
Atru.chr9.851 Acer truncatum HOM05D003988 ORTHO05D004688 5.3e-20 101.7 74 64.9
Actinidia35091 Actinidia chinensis HOM05D003988 ORTHO05D004688 5.3e-20 101.7 71 64.8
DCAR_023207 Daucus carota HOM05D003988 ORTHO05D004688 5.3e-20 101.7 74 60.8
Rhsim08G0133900 Rhododendron simsii HOM05D003988 ORTHO05D004688 5.3e-20 101.7 74 60.8
Zm00001eb125450 Zea mays HOM05D003988 ORTHO05D004688 5.3e-20 101.7 79 60.8
COL.COLO4_32832 Corchorus olitorius HOM05D003988 ORTHO05D004688 6.9e-20 101.3 74 63.5
CsaV3_1G006640 Cucumis sativus L. HOM05D003988 ORTHO05D004688 9.0e-20 100.9 74 63.5
Sed0007612 Sechium edule HOM05D003988 ORTHO05D004688 9.0e-20 100.9 73 63.0
VMungo0251G2522 Vigna mungo HOM05D003988 ORTHO05D004688 1.2e-19 100.5 71 70.4
GSVIVG01031025001 Vitis vinifera HOM05D003988 ORTHO05D004688 1.2e-19 100.5 74 62.2
Lj5C149G16 Lonicera japonica HOM05D003988 ORTHO05D004688 1.5e-19 100.1 71 60.6
Hund02386 Selenicereus undatus HOM05D003988 ORTHO05D004688 1.5e-19 100.1 74 64.9
Ca_25441_v3 Cicer arietinum L. HOM05D003988 ORTHO05D004688 2.6e-19 99.4 74 68.9
ClCG06G014770 Citrullus lanatus HOM05D003988 ORTHO05D004688 2.6e-19 99.4 74 60.8
MELO3C017311.2 Cucumis melo HOM05D003988 ORTHO05D004688 2.6e-19 99.4 74 60.8
Dinv15683 Davidia involucrata HOM05D003988 ORTHO05D004688 2.6e-19 99.4 74 62.2
Glyma.08G041800 Glycine max HOM05D003988 ORTHO05D004688 2.6e-19 99.4 74 68.9
Ciclev10018856m.g Citrus clementina HOM05D003988 ORTHO05D004688 4.5e-19 98.6 74 63.5
TWI15G0963 Tripterygium wilfordii HOM05D003988 ORTHO05D004688 4.5e-19 98.6 74 64.9
AUR62025848 Chenopodium quinoa HOM05D003988 ORTHO05D004688 5.8e-19 98.2 74 63.5
Nitab4.5_0002906g0030 Nicotiana tabacum HOM05D003988 ORTHO05D004688 7.6e-19 97.8 74 60.8
SGA_v2.0_scaffold146G36202 Striga asiatica HOM05D003988 ORTHO05D004688 7.6e-19 97.8 78 59.0
Actinidia18930 Actinidia chinensis HOM05D003988 ORTHO05D004688 1.0e-18 97.4 71 62.0
arahy.Tifrunner.gnm1.ann1.SQZX99 Arachis hypogaea HOM05D003988 ORTHO05D004688 1.0e-18 97.4 49 98.0
CAN.G1889.6 Capsicum annuum HOM05D003988 ORTHO05D004688 1.0e-18 97.4 74 60.8
Medtr8g104330 Medicago truncatula HOM05D003988 ORTHO05D004688 1.0e-18 97.4 74 67.6
CsaV3_1G003870 Cucumis sativus L. HOM05D003988 ORTHO05D004688 1.3e-18 97.1 74 59.5
PGSC0003DMG400005722 Solanum tuberosum HOM05D003988 ORTHO05D004688 1.3e-18 97.1 74 60.8
DCAR_011356 Daucus carota HOM05D003988 ORTHO05D004688 1.7e-18 96.7 74 58.1
Nitab4.5_0009306g0030 Nicotiana tabacum HOM05D003988 ORTHO05D004688 1.7e-18 96.7 74 59.5
PSO017G3983 Papaver somniferum HOM05D003988 ORTHO05D004688 1.7e-18 96.7 74 59.5
Psat7g010800 Pisum sativum HOM05D003988 ORTHO05D004688 1.7e-18 96.7 74 67.6
Solyc03g119440.3 Solanum lycopersicum HOM05D003988 ORTHO05D004688 1.7e-18 96.7 74 59.5
Sopen03g038290 Solanum pennellii HOM05D003988 ORTHO05D004688 1.7e-18 96.7 74 59.5
Sopen05g027970 Solanum pennellii HOM05D003988 ORTHO05D004688 1.7e-18 96.7 74 59.5
Thecc.03G036400 Theobroma cacao HOM05D003988 ORTHO05D004688 1.7e-18 96.7 74 62.2
ATR1125G120 Amborella trichopoda HOM05D003988 ORTHO05D004688 2.2e-18 96.3 74 59.5
CSS0009918 Camellia sinensis var. sinensis HOM05D003988 ORTHO05D004688 2.2e-18 96.3 71 62.0
Haze_18685 Corylus avellana HOM05D003988 ORTHO05D004688 2.2e-18 96.3 74 62.2
Aqoxy3G00281 Aquilegia oxysepala HOM05D003988 ORTHO05D004688 2.9e-18 95.9 71 60.6
FAN08G2998 Fragaria x ananassa HOM05D003988 ORTHO05D004688 2.9e-18 95.9 88 56.8
MSTRG.25559 Avicennia marina HOM05D003988 ORTHO05D004688 3.8e-18 95.5 71 60.6
Cfa019762 Carpinus fangiana HOM05D003988 ORTHO05D004688 3.8e-18 95.5 74 60.8
PSO478G1317 Papaver somniferum HOM05D003988 ORTHO05D004688 3.8e-18 95.5 74 58.1
Psat1g038080 Pisum sativum HOM05D003988 ORTHO05D004688 3.8e-18 95.5 71 69.0
EL10Ac5g11452 Beta vulgaris HOM05D003988 ORTHO05D004688 5.0e-18 95.1 74 63.5
GSVIVG01008297001 Vitis vinifera HOM05D003988 ORTHO05D004688 5.0e-18 95.1 74 58.1
Phvul.002G316700 Phaseolus vulgaris HOM05D003988 ORTHO05D004688 6.5e-18 94.7 71 66.2
CiPaw.16G086900 Carya illinoinensis HOM05D003988 ORTHO05D004688 8.4e-18 94.4 74 59.5
QL10p025473 Quercus lobata HOM05D003988 ORTHO05D004688 8.4e-18 94.4 74 60.8
Duzib068G0062 Durio zibethinus HOM05D003988 ORTHO05D004688 1.4e-17 93.6 71 62.0
Duzib205G1863 Durio zibethinus HOM05D003988 ORTHO05D004688 1.4e-17 93.6 74 59.5
Sc04g0003480 Simmondsia chinensis HOM05D003988 ORTHO05D004688 1.4e-17 93.6 74 58.1
Lsat_1_v5_gn_8_146920 Lactuca sativa HOM05D003988 ORTHO05D004688 1.9e-17 93.2 79 53.2
Gohir.D12G267000 Gossypium hirsutum HOM05D003988 ORTHO05D004688 2.5e-17 92.8 74 59.5
Gorai.008G287000 Gossypium raimondii HOM05D003988 ORTHO05D004688 2.5e-17 92.8 74 59.5
Eucgr.K02227 Eucalyptus grandis HOM05D003988 ORTHO05D004688 4.2e-17 92.0 74 63.5
THA.LOC104820392 Tarenaya hassleriana HOM05D003988 ORTHO05D004688 4.2e-17 92.0 74 54.1
Gohir.A12G266600 Gossypium hirsutum HOM05D003988 ORTHO05D004688 5.5e-17 91.7 74 59.5
CSS0004736 Camellia sinensis var. sinensis HOM05D003988 ORTHO05D004688 7.1e-17 91.3 71 57.7
CSS0041631 Camellia sinensis var. sinensis HOM05D003988 ORTHO05D004688 7.1e-17 91.3 71 57.7
Migut.A00873 Erythranthe guttata HOM05D003988 ORTHO05D004688 7.1e-17 91.3 74 54.1
Cc04_g07060 Coffea canephora HOM05D003988 ORTHO05D004688 9.3e-17 90.9 76 55.3
Ah.11g045100 Amaranthus hybridus HOM05D003988 ORTHO05D004688 1.2e-16 90.5 74 60.8
Manes.05G113166 Manihot esculenta HOM05D003988 ORTHO05D004688 1.2e-16 90.5 74 59.5
CDE12G0686 Ceratophyllum demersum HOM05D003988 ORTHO05D004688 4.6e-16 88.6 71 59.2
Nn3g17861 Nelumbo nucifera HOM05D003988 ORTHO05D004688 4.6e-16 88.6 74 51.4
Aa31LG8G5200 Aethionema arabicum HOM05D003988 ORTHO05D004688 1.3e-15 87.0 72 55.6
Nn4g23862 Nelumbo nucifera HOM05D003988 ORTHO05D004688 1.3e-15 87.0 73 56.2
Oeu064716.1 Olea europaea HOM05D003988 ORTHO05D004688 1.8e-15 86.7 74 52.7
HPP92_000179 Vanilla planifolia HOM05D003988 ORTHO05D004688 3.9e-15 85.5 74 56.8
SalBow1G3470 Salvia bowleyana HOM05D003988 ORTHO05D004688 8.7e-15 84.3 68 55.9
SalBow1G4660 Salvia bowleyana HOM05D003988 ORTHO05D004688 8.7e-15 84.3 68 55.9
SalBow6G4224 Salvia bowleyana HOM05D003988 ORTHO05D004688 8.7e-15 84.3 71 53.5
MSTRG.12041 Avicennia marina HOM05D003988 ORTHO05D004688 1.5e-14 83.6 74 50.0
ECA233G4392 Erigeron canadensis HOM05D003988 ORTHO05D004688 1.5e-14 83.6 79 50.6
CARHR093720 Cardamine hirsuta HOM05D003988 ORTHO05D004688 3.3e-14 82.4 74 50.0
BcaC05g28634 Brassica carinata HOM05D003988 ORTHO05D004688 4.3e-14 82.0 74 51.4
C05p47400 Brassica napus HOM05D003988 ORTHO05D004688 4.3e-14 82.0 74 51.4
BolC5t33466H Brassica oleracea HOM05D003988 ORTHO05D004688 4.3e-14 82.0 74 51.4
arahy.Tifrunner.gnm1.ann1.30R83I Arachis hypogaea HOM05D000501 ORTHO05D000376 5.7e-14 81.6 42 90.5
BcaB06g25881 Brassica carinata HOM05D003988 ORTHO05D004688 5.7e-14 81.6 74 51.4
A05p31310 Brassica napus HOM05D003988 ORTHO05D004688 5.7e-14 81.6 74 51.4
BraA05t21969Z Brassica rapa HOM05D003988 ORTHO05D004688 5.7e-14 81.6 74 51.4
Thhalv10020065m.g Eutrema salsugineum HOM05D003988 ORTHO05D004688 5.7e-14 81.6 74 50.0
arahy.Tifrunner.gnm1.ann1.WRZ64D Arachis hypogaea HOM05D003988 ORTHO05D014448 7.4e-14 81.3 52 86.5
CiPaw.15G131300 Carya illinoinensis HOM05D003988 ORTHO05D004688 7.4e-14 81.3 74 56.8
AL3G31660 Arabidopsis lyrata HOM05D003988 ORTHO05D004688 9.7e-14 80.9 74 50.0
Sp3g16480 Schrenkiella parvula HOM05D003988 ORTHO05D004688 1.6e-13 80.1 74 48.6
HanXRQChr08g0226051 Helianthus annuus HOM05D003988 ORTHO05D004688 2.2e-13 79.7 79 45.6
AT3G18370 Arabidopsis thaliana HOM05D003988 ORTHO05D004688 2.8e-13 79.3 74 48.6
arahy.Tifrunner.gnm1.ann1.N2D0NW Arachis hypogaea HOM05D003988 ORTHO05D014448 2.8e-13 79.3 48 93.8
arahy.Tifrunner.gnm1.ann1.QYC5LS Arachis hypogaea HOM05D003988 ORTHO05D014448 3.7e-13 79.0 50 90.0
Pp3c15_17330 Physcomitrium patens HOM05D003988 ORTHO05D004688 3.7e-13 79.0 75 52.0
arahy.Tifrunner.gnm1.ann1.PG3FKP Arachis hypogaea HOM05D003988 ORTHO05D086284 1.1e-12 77.4 48 91.7
Carub.0003s1815 Capsella rubella HOM05D003988 ORTHO05D004688 2.4e-12 76.3 74 48.6
arahy.Tifrunner.gnm1.ann1.PAK5F5 Arachis hypogaea HOM05D003988 ORTHO05D014448 3.1e-12 75.9 64 71.9
arahy.Tifrunner.gnm1.ann1.WHR9G5 Arachis hypogaea HOM05D003988 ORTHO05D014448 5.3e-12 75.1 52 84.6
Mapoly0126s0037 Marchantia polymorpha HOM05D003988 ORTHO05D004688 5.3e-12 75.1 75 52.0
arahy.Tifrunner.gnm1.ann1.8PIL24 Arachis hypogaea HOM05D003988 ORTHO05D014448 6.9e-12 74.7 50 86.0
arahy.Tifrunner.gnm1.ann1.W7NNEU Arachis hypogaea HOM05D003988 ORTHO05D014448 1.5e-11 73.6 52 82.7
MELO3C002088.2 Cucumis melo HOM05D003988 ORTHO05D004688 2.0e-11 73.2 135 34.8
Pp3c9_20840 Physcomitrium patens HOM05D003988 ORTHO05D004688 2.6e-11 72.8 75 48.0
vmacro17712 Vaccinium macrocarpon HOM05D003988 ORTHO05D004688 3.4e-11 72.4 57 52.6
ClCG04G011120 Citrullus lanatus HOM05D003988 ORTHO05D004688 2.2e-10 69.7 146 32.9
AagrBONN_evm.TU.Sc2ySwM_344.3810 Anthoceros agrestis HOM05D003988 ORTHO05D004688 1.9e-09 66.6 75 52.0
CBR_g27919 Chara braunii HOM05D003988 ORTHO05D011373 1.6e-08 63.5 77 45.5
AagrBONN_evm.TU.Sc2ySwM_344.3647 Anthoceros agrestis HOM05D003988 ORTHO05D004688 4.6e-08 62.0 76 50.0
arahy.Tifrunner.gnm1.ann1.GXR4QA Arachis hypogaea HOM05D003988 ORTHO05D004688 2.3e-07 59.7 44 61.4
SMO117G0174 Selaginella moellendorffii HOM05D003988 ORTHO05D004688 2.3e-07 59.7 75 41.3
arahy.Tifrunner.gnm1.ann1.BG59TV Arachis hypogaea HOM05D000501 ORTHO05D004688 5.1e-07 58.5 32 81.2
Peaxi162Scf00015g01040 Petunia axillaris HOM05D003988 ORTHO05D004688 1.1e-06 57.4 43 60.5
arahy.Tifrunner.gnm1.ann1.3CK710 Arachis hypogaea HOM05D001092 ORTHO05D000923 2.5e-06 56.2 86 50.0
arahy.Tifrunner.gnm1.ann1.W5KYCX Arachis hypogaea HOM05D000501 ORTHO05D000376 2.5e-06 56.2 25 100.0
arahy.Tifrunner.gnm1.ann1.DT3E7E Arachis hypogaea HOM05D000106 ORTHO05D013005 3.3e-06 55.8 51 72.5
Hund10252 Selenicereus undatus HOM05D003988 ORTHO05D004688 4.3e-06 55.5 43 60.5
arahy.Tifrunner.gnm1.ann1.77EU82 Arachis hypogaea HOM05D000106 ORTHO05D013005 5.7e-06 55.1 50 76.0
arahy.Tifrunner.gnm1.ann1.045FSF Arachis hypogaea HOM05D033157 ORTHO05D086115 7.4e-06 54.7 62 58.1


User provided reference genes

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