Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SX1TLQ Arachis hypogaea HOM05D003453 ORTHO05D004154 3.5e-133 478.8 340 100.0
arahy.Tifrunner.gnm1.ann1.JP7J3T Arachis hypogaea HOM05D003453 ORTHO05D004154 1.1e-113 414.1 359 86.4
Duzib168G0040 Durio zibethinus HOM05D003453 ORTHO05D004154 3.4e-64 249.6 354 63.8
VMungo1215G2556 Vigna mungo HOM05D003453 ORTHO05D004154 2.2e-63 246.9 359 66.3
Phvul.003G139800 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 1.4e-62 244.2 360 68.1
Atru.chr7.914 Acer truncatum HOM05D003453 ORTHO05D004154 6.7e-60 235.3 365 63.0
Glyma.17G057600 Glycine max HOM05D003453 ORTHO05D004154 8.8e-60 235.0 335 68.1
Lalb_Chr13g0299841 Lupinus albus HOM05D003453 ORTHO05D004154 4.4e-59 232.6 359 62.4
FAN22G1784 Fragaria x ananassa HOM05D003453 ORTHO05D004154 9.7e-59 231.5 328 59.5
Thecc.09G192200 Theobroma cacao HOM05D003453 ORTHO05D004154 6.3e-58 228.8 331 64.7
Prupe.1G072100 Prunus persica HOM05D003453 ORTHO05D004154 8.2e-58 228.4 356 61.5
Psat4g014280 Pisum sativum HOM05D003453 ORTHO05D004154 1.8e-57 227.3 358 48.6
Ca_21264_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 1.2e-56 224.6 366 57.9
MD13G1241200 Malus domestica HOM05D003453 ORTHO05D004154 1.5e-56 224.2 331 64.7
COL.COLO4_37566 Corchorus olitorius HOM05D003453 ORTHO05D004154 2.6e-56 223.4 345 61.7
Lj4g0007200 Lotus japonicus HOM05D003453 ORTHO05D004154 4.5e-56 222.6 362 64.6
Lalb_Chr07g0180741 Lupinus albus HOM05D003453 ORTHO05D004154 1.0e-55 221.5 360 62.5
TWI34G1803 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 1.7e-55 220.7 356 63.5
MD16G1245200 Malus domestica HOM05D003453 ORTHO05D004154 3.8e-55 219.5 356 61.2
PGR044G1644 Punica granatum HOM05D003453 ORTHO05D004154 6.5e-55 218.8 345 58.0
FAN12G0296 Fragaria x ananassa HOM05D003453 ORTHO05D004154 1.9e-54 217.2 328 54.6
Gorai.012G008100 Gossypium raimondii HOM05D003453 ORTHO05D004154 5.5e-54 215.7 354 59.0
Sp3g32700 Schrenkiella parvula HOM05D003453 ORTHO05D004154 5.5e-54 215.7 329 65.0
AL3G48980 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 7.2e-54 215.3 329 64.4
AT2G19330 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 7.2e-54 215.3 329 64.7
CiPaw.08G031400 Carya illinoinensis HOM05D003453 ORTHO05D004154 1.6e-53 214.2 356 60.4
Medtr4g127120 Medicago truncatula HOM05D003453 ORTHO05D004154 1.6e-53 214.2 357 57.7
TPR.G5414 Trifolium pratense HOM05D003453 ORTHO05D004154 2.1e-53 213.8 362 56.1
Aa31LG8G16370 Aethionema arabicum HOM05D003453 ORTHO05D004154 1.0e-52 211.5 334 62.6
Ciclev10008785m.g Citrus clementina HOM05D003453 ORTHO05D004154 1.0e-52 211.5 360 58.9
Gohir.A13G182300 Gossypium hirsutum HOM05D003453 ORTHO05D004154 1.0e-52 211.5 339 64.9
TWI32G0581 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 1.0e-52 211.5 328 64.9
BcaB03g16722 Brassica carinata HOM05D003453 ORTHO05D004154 1.8e-52 210.7 329 63.5
Cpa.g.sc115.61 Carica papaya HOM05D003453 ORTHO05D004154 2.3e-52 210.3 355 58.6
Thhalv10022960m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 4.0e-52 209.5 329 62.9
Gorai.013G211100 Gossypium raimondii HOM05D003453 ORTHO05D004154 4.0e-52 209.5 340 64.7
A07p01420 Brassica napus HOM05D003453 ORTHO05D004154 6.7e-52 208.8 329 62.9
C07p02870 Brassica napus HOM05D003453 ORTHO05D004154 6.7e-52 208.8 329 62.9
BolC7t40684H Brassica oleracea HOM05D003453 ORTHO05D004154 6.7e-52 208.8 329 62.9
BraA07t27936Z Brassica rapa HOM05D003453 ORTHO05D004154 6.7e-52 208.8 329 62.9
CARHR109780 Cardamine hirsuta HOM05D003453 ORTHO05D004154 1.5e-51 207.6 328 62.8
Carub.0003s3355 Capsella rubella HOM05D003453 ORTHO05D004154 9.7e-51 204.9 329 62.9
FAN07G0750 Fragaria x ananassa HOM05D003453 ORTHO05D004154 1.7e-50 204.1 352 54.0
Haze_22047 Corylus avellana HOM05D003453 ORTHO05D004154 2.2e-50 203.8 355 42.5
FvH4_4g06910 Fragaria vesca HOM05D003453 ORTHO05D004154 2.2e-50 203.8 328 56.1
ClCG11G011550 Citrullus lanatus HOM05D003453 ORTHO05D004154 3.7e-50 203.0 330 63.3
FAN17G0675 Fragaria x ananassa HOM05D003453 ORTHO05D004154 3.7e-50 203.0 328 55.8
RcHm_v2.0_Chr4g0398811 Rosa chinensis HOM05D003453 ORTHO05D004154 1.8e-49 200.7 328 55.5
Duzib150G0655 Durio zibethinus HOM05D003453 ORTHO05D004154 2.4e-49 200.3 361 54.3
Actinidia38507 Actinidia chinensis HOM05D003453 ORTHO05D004154 1.2e-48 198.0 329 59.6
Eucgr.C00085 Eucalyptus grandis HOM05D003453 ORTHO05D004154 2.0e-48 197.2 310 65.5
Duzib170G0719 Durio zibethinus HOM05D003453 ORTHO05D004154 1.3e-47 194.5 361 59.3
Sabra06G0054100 Salix brachista HOM05D003453 ORTHO05D004154 5.0e-47 192.6 378 59.0
Eucgr.C02218 Eucalyptus grandis HOM05D003453 ORTHO05D004154 1.1e-46 191.4 356 60.4
CsaV3_2G008970 Cucumis sativus L. HOM05D003453 ORTHO05D004154 1.5e-46 191.0 332 60.2
Migut.J00777 Erythranthe guttata HOM05D003453 ORTHO05D004154 1.5e-46 191.0 353 54.1
Oeu043899.1 Olea europaea HOM05D003453 ORTHO05D004154 1.5e-46 191.0 355 52.1
CSS0013411 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 2.5e-46 190.3 328 56.4
CSS0032765 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 2.5e-46 190.3 328 56.4
Gohir.D04G006700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 2.5e-46 190.3 354 56.2
Manes.14G161200 Manihot esculenta HOM05D003453 ORTHO05D004154 2.5e-46 190.3 359 60.2
Oeu035455.1 Olea europaea HOM05D003453 ORTHO05D004154 1.2e-45 188.0 329 54.4
Potri.006G072700 Populus trichocarpa HOM05D003453 ORTHO05D004154 2.1e-45 187.2 378 57.4
CANSAT11G2669 Cannabis sativa HOM05D003453 ORTHO05D004154 1.4e-44 184.5 339 61.9
SHI03070 Sapria himalayana HOM05D003453 ORTHO05D004154 1.4e-44 184.5 324 47.8
Nn8g40645 Nelumbo nucifera HOM05D003453 ORTHO05D004154 2.3e-44 183.7 335 51.9
Thhalv10027502m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 4.0e-44 183.0 362 55.5
THA.LOC104814639 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 5.2e-44 182.6 336 60.4
AT4G29880 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 6.8e-44 182.2 335 60.0
GSVIVG01029273001 Vitis vinifera HOM05D003453 ORTHO05D004154 8.8e-44 181.8 316 62.7
AL7G22370 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 2.6e-43 180.3 335 59.4
TAR625G0633 Trochodendron aralioides HOM05D003453 ORTHO05D004154 2.6e-43 180.3 331 59.5
Potri.018G139700 Populus trichocarpa HOM05D003453 ORTHO05D004154 9.8e-43 178.3 351 59.8
SalBow3G1932 Salvia bowleyana HOM05D003453 ORTHO05D004154 1.7e-42 177.6 328 58.8
DCAR_009479 Daucus carota HOM05D003453 ORTHO05D004154 3.7e-42 176.4 369 50.1
Lalb_Chr23g0276711 Lupinus albus HOM05D003453 ORTHO05D004154 3.7e-42 176.4 329 58.7
Gohir.A05G408700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 6.3e-42 175.6 345 55.7
QL02p064658 Quercus lobata HOM05D003453 ORTHO05D004154 6.3e-42 175.6 360 54.2
CiPaw.07G199200 Carya illinoinensis HOM05D003453 ORTHO05D004154 8.3e-42 175.3 298 58.4
BraA03t14715Z Brassica rapa HOM05D003453 ORTHO05D004154 1.8e-41 174.1 348 51.7
Carub.0004s1475 Capsella rubella HOM05D003453 ORTHO05D004154 4.1e-41 172.9 335 53.7
Eucgr.C00084 Eucalyptus grandis HOM05D003453 ORTHO05D004154 4.1e-41 172.9 310 64.2
Aqoxy7G02898 Aquilegia oxysepala HOM05D003453 ORTHO05D004154 5.4e-41 172.6 358 57.3
EL10Ac8g19292 Beta vulgaris HOM05D003453 ORTHO05D004154 9.1e-41 171.8 331 54.1
A03p59300 Brassica napus HOM05D003453 ORTHO05D004154 2.0e-40 170.6 329 55.6
BraA03t14987Z Brassica rapa HOM05D003453 ORTHO05D004154 2.0e-40 170.6 329 55.6
Glyma.09G061500 Glycine max HOM05D003453 ORTHO05D004154 3.5e-40 169.9 346 57.2
Actinidia29965 Actinidia chinensis HOM05D003453 ORTHO05D004154 5.9e-40 169.1 168 55.4
Cc06_g17230 Coffea canephora HOM05D003453 ORTHO05D004154 5.9e-40 169.1 316 51.3
Oeu044656.1 Olea europaea HOM05D003453 ORTHO05D004154 5.9e-40 169.1 328 53.0
CARHR237770 Cardamine hirsuta HOM05D003453 ORTHO05D004154 7.7e-40 168.7 347 57.9
Ah.09g228510 Amaranthus hybridus HOM05D003453 ORTHO05D004154 1.0e-39 168.3 321 60.4
Sed0020380 Sechium edule HOM05D003453 ORTHO05D004154 1.0e-39 168.3 329 58.7
CsaV3_1G032040 Cucumis sativus L. HOM05D003453 ORTHO05D004154 1.7e-39 167.5 321 60.4
Rhsim02G0202600 Rhododendron simsii HOM05D003453 ORTHO05D004154 5.0e-39 166.0 354 57.9
C07p54660 Brassica napus HOM05D003453 ORTHO05D004154 1.9e-38 164.1 344 50.0
BolC7t45955H Brassica oleracea HOM05D003453 ORTHO05D004154 1.9e-38 164.1 344 50.0
Phvul.009G234500 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 1.9e-38 164.1 333 57.4
unitig_578.g15728 Utricularia gibba HOM05D003453 ORTHO05D004154 2.5e-38 163.7 343 44.3
MELO3C003949.2 Cucumis melo HOM05D003453 ORTHO05D004154 3.2e-38 163.3 332 56.6
Glyma.15G167800 Glycine max HOM05D003453 ORTHO05D004154 4.2e-38 162.9 336 56.5
CDE02G3632 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 1.2e-37 161.4 340 52.1
Sabra18G0114200 Salix brachista HOM05D003453 ORTHO05D004154 2.1e-37 160.6 332 59.0
arahy.Tifrunner.gnm1.ann1.N816GG Arachis hypogaea HOM05D003453 ORTHO05D004154 1.0e-36 158.3 304 59.5
CDE05G3189 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 1.4e-36 157.9 333 51.4
Hund24523 Selenicereus undatus HOM05D003453 ORTHO05D004154 1.4e-36 157.9 323 57.9
Peaxi162Scf00006g02914 Petunia axillaris HOM05D003453 ORTHO05D004154 1.8e-36 157.5 344 54.4
CDE05G1169 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 4.0e-36 156.4 333 43.5
ClCG06G013840 Citrullus lanatus HOM05D003453 ORTHO05D004154 4.0e-36 156.4 285 56.5
Dinv25469 Davidia involucrata HOM05D003453 ORTHO05D004154 5.2e-36 156.0 359 50.4
arahy.Tifrunner.gnm1.ann1.3E2B2N Arachis hypogaea HOM05D003453 ORTHO05D004154 6.8e-36 155.6 304 58.9
Hma1.2p1_0235F.1_g098820 Hydrangea macrophylla HOM05D003453 ORTHO05D004154 8.8e-36 155.2 278 61.5
Lj6g0025589 Lotus japonicus HOM05D003453 ORTHO05D004154 2.6e-35 153.7 322 57.5
HanXRQChr05g0142141 Helianthus annuus HOM05D003453 ORTHO05D004154 5.7e-35 152.5 327 52.6
DCAR_020142 Daucus carota HOM05D003453 ORTHO05D004154 3.7e-34 149.8 326 47.5
TPR.G2523 Trifolium pratense HOM05D003453 ORTHO05D004154 8.3e-34 148.7 344 58.1
VMungo1309G3166 Vigna mungo HOM05D003453 ORTHO05D004154 1.1e-33 148.3 349 55.9
PSO063G7373 Papaver somniferum HOM05D003453 ORTHO05D004154 1.4e-33 147.9 332 56.6
Sed0024940 Sechium edule HOM05D003453 ORTHO05D004154 1.8e-33 147.5 329 51.7
Medtr2g038380 Medicago truncatula HOM05D003453 ORTHO05D004154 2.4e-33 147.1 324 61.4
SGA_v2.0_scaffold31G12781 Striga asiatica HOM05D003453 ORTHO05D004154 4.1e-33 146.4 328 50.0
MBI16_g09350_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 5.4e-33 146.0 360 46.9
Manes.06G017500 Manihot esculenta HOM05D003453 ORTHO05D004154 1.3e-31 141.4 357 52.4
Rhsim03G0267900 Rhododendron simsii HOM05D003453 ORTHO05D004154 1.7e-31 141.0 315 60.3
Sc08g0004730 Simmondsia chinensis HOM05D003453 ORTHO05D004154 1.7e-31 141.0 372 33.3
Ca_02128_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 1.1e-30 138.3 324 54.6
THA.LOC104817769 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 1.9e-30 137.5 353 51.0
A03p56450 Brassica napus HOM05D003453 ORTHO05D004154 2.5e-30 137.1 344 51.2
CARHR233550 Cardamine hirsuta HOM05D003453 ORTHO05D004154 3.3e-30 136.7 342 53.5
HanXRQChr04g0103791 Helianthus annuus HOM05D003453 ORTHO05D004154 3.3e-30 136.7 345 55.4
Psat1g142960 Pisum sativum HOM05D003453 ORTHO05D004154 7.2e-30 135.6 324 59.3
A01p17310 Brassica napus HOM05D003453 ORTHO05D004154 2.8e-29 133.7 315 55.2
BraA01t01686Z Brassica rapa HOM05D003453 ORTHO05D004154 2.8e-29 133.7 315 55.2
HanXRQChr09g0245371 Helianthus annuus HOM05D003453 ORTHO05D004154 3.6e-29 133.3 323 56.3
ECA236G3452 Erigeron canadensis HOM05D003453 ORTHO05D004154 4.7e-29 132.9 170 49.4
BcaC06g32772 Brassica carinata HOM05D003453 ORTHO05D004154 1.0e-28 131.7 345 51.6
BolC1t02107H Brassica oleracea HOM05D003453 ORTHO05D004154 1.0e-28 131.7 315 55.2
AT4G26050 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 1.4e-28 131.3 357 51.8
Thhalv10025419m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 1.4e-28 131.3 331 52.6
Lsat_1_v5_gn_7_55120 Lactuca sativa HOM05D003453 ORTHO05D004154 1.8e-28 131.0 353 55.0
C01p21810 Brassica napus HOM05D003453 ORTHO05D004154 2.3e-28 130.6 314 54.5
AUR62027430 Chenopodium quinoa HOM05D003453 ORTHO05D004154 4.0e-28 129.8 310 35.8
ECA240G3569 Erigeron canadensis HOM05D003453 ORTHO05D004154 5.2e-28 129.4 338 55.9
Psat1g142440 Pisum sativum HOM05D003453 ORTHO05D004154 5.2e-28 129.4 333 56.5
Aa31LG2G20670 Aethionema arabicum HOM05D003453 ORTHO05D004154 8.9e-28 128.6 169 45.0
BcaNung00498 Brassica carinata HOM05D003453 ORTHO05D004154 2.6e-27 127.1 322 49.4
BcaC06g36564 Brassica carinata HOM05D003453 ORTHO05D004154 4.4e-27 126.3 250 62.4
AL7G26940 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 9.8e-27 125.2 345 51.3
PSO170G1153 Papaver somniferum HOM05D003453 ORTHO05D004154 9.8e-27 125.2 344 53.5
Os04g0605300 Oryza sativa ssp. japonica HOM05D003453 ORTHO05D004154 2.9e-26 123.6 342 51.2
SHI33663 Sapria himalayana HOM05D003453 ORTHO05D004154 3.7e-26 123.2 163 47.9
Sed0001635 Sechium edule HOM05D003453 ORTHO05D004154 3.7e-26 123.2 272 43.8
Lju50A41T23 Lonicera japonica HOM05D003453 ORTHO05D004154 4.9e-26 122.9 154 49.4
Lju50A42T20 Lonicera japonica HOM05D003453 ORTHO05D004154 4.9e-26 122.9 154 49.4
Gohir.D13G185000 Gossypium hirsutum HOM05D003453 ORTHO05D004154 6.4e-26 122.5 275 62.9
Aa31LG3G390 Aethionema arabicum HOM05D003453 ORTHO05D004154 1.1e-25 121.7 320 39.7
PSO063G4618 Papaver somniferum HOM05D003453 ORTHO05D004154 1.1e-25 121.7 344 53.5
Lsat_1_v5_gn_8_68380 Lactuca sativa HOM05D003453 ORTHO05D004154 1.8e-25 120.9 169 47.3
AUR62031265 Chenopodium quinoa HOM05D003453 ORTHO05D004154 4.1e-25 119.8 174 47.1
DCAR_018009 Daucus carota HOM05D003453 ORTHO05D004154 5.4e-25 119.4 370 43.0
Lju432C7T0 Lonicera japonica HOM05D003453 ORTHO05D004154 5.4e-25 119.4 154 48.7
PGSC0003DMG400006458 Solanum tuberosum HOM05D003453 ORTHO05D004154 1.2e-24 118.2 324 53.4
ATR0580G242 Amborella trichopoda HOM05D003453 ORTHO05D004154 2.0e-24 117.5 333 48.3
Oeu012385.1 Olea europaea HOM05D003453 ORTHO05D004154 3.5e-24 116.7 316 30.7
Sp7g27690 Schrenkiella parvula HOM05D003453 ORTHO05D004154 5.9e-24 115.9 336 48.2
BolC7t46200H Brassica oleracea HOM05D003453 ORTHO05D004154 3.0e-23 113.6 329 48.3
Carub.0007s1491 Capsella rubella HOM05D003453 ORTHO05D004154 3.9e-23 113.2 344 45.1
C07p57310 Brassica napus HOM05D003453 ORTHO05D004154 6.6e-23 112.5 329 48.0
PGR018G0002 Punica granatum HOM05D003453 ORTHO05D004154 1.1e-22 111.7 326 48.2
PGR142G3132 Punica granatum HOM05D003453 ORTHO05D004154 1.1e-22 111.7 326 48.2
PGR142G4131 Punica granatum HOM05D003453 ORTHO05D004154 1.1e-22 111.7 326 48.2
Zm00001eb071570 Zea mays HOM05D003453 ORTHO05D004154 2.5e-22 110.5 336 51.8
Sopen12g008270 Solanum pennellii HOM05D003453 ORTHO05D004154 1.2e-21 108.2 324 48.1
Solyc12g017480.3 Solanum lycopersicum HOM05D003453 ORTHO05D004154 1.6e-21 107.8 324 48.1
MSTRG.19360 Avicennia marina HOM05D003453 ORTHO05D004154 1.8e-20 104.4 107 51.4
MBI14_g10728_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 2.3e-20 104.0 166 42.8
Nitab4.5_0001335g0020 Nicotiana tabacum HOM05D003453 ORTHO05D004154 7.5e-19 99.0 356 32.3
vmacro22287 Vaccinium macrocarpon HOM05D003453 ORTHO05D004154 8.3e-18 95.5 147 43.5
MELO3C029529.2 Cucumis melo HOM05D003453 ORTHO05D004154 1.2e-16 91.7 85 57.6
Sc14g0003130 Simmondsia chinensis HOM05D003453 ORTHO05D004154 1.2e-13 81.6 334 48.2
Actinidia29966 Actinidia chinensis HOM05D003453 ORTHO05D004154 2.8e-13 80.5 85 57.6
HPP92_010787 Vanilla planifolia HOM05D003453 ORTHO05D004154 4.7e-13 79.7 161 36.0
CDE04G2437 Ceratophyllum demersum HOM05D002648 ORTHO05D002899 3.1e-12 77.0 267 48.7
BcaB08g34854 Brassica carinata HOM05D003453 ORTHO05D004154 8.9e-12 75.5 121 41.3
BraA07t29361Z Brassica rapa HOM05D003453 ORTHO05D042392 1.1e-06 58.5 60 61.7
SHI17281 Sapria himalayana HOM05D002488 ORTHO05D002613 5.6e-06 56.2 84 44.0


User provided reference genes

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