Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 0.0e+00 1334.7 679 100.0
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 0.0e+00 1323.1 679 99.0
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 1.0e-232 810.4 697 63.8
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 2.0e-228 796.2 680 63.7
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 5.8e-220 768.1 681 62.0
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 7.5e-220 767.7 681 62.4
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 2.4e-218 762.7 699 61.7
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 1.2e-214 750.4 686 60.8
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 1.9e-210 736.5 615 65.0
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 1.6e-209 733.4 679 61.6
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 1.3e-208 730.3 681 62.0
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 3.3e-207 725.7 680 60.9
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 2.7e-201 706.1 621 64.4
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 1.1e-151 541.2 611 52.0
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 1.7e-150 537.3 603 52.7
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 4.2e-146 522.7 714 46.4
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 2.7e-137 493.4 683 45.1
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 2.0e-132 477.2 698 45.6
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 4.2e-130 469.5 697 44.0
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 6.1e-129 465.7 690 43.5
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 1.4e-128 464.5 674 44.5
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 4.4e-127 459.5 700 42.9
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 2.2e-126 457.2 688 44.2
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 3.5e-124 449.9 702 42.6
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 2.3e-120 437.2 574 47.0
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 2.6e-119 433.7 695 42.6
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 2.0e-116 424.1 597 45.1
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 1.7e-115 421.0 597 45.1
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 8.6e-115 418.7 672 41.7
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 2.5e-114 417.2 597 44.9
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 9.5e-114 415.2 696 41.7
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 1.2e-113 414.8 690 40.9
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 4.7e-113 412.9 701 40.9
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 2.6e-111 407.1 692 39.9
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 5.7e-111 406.0 596 42.6
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 1.1e-109 401.7 696 39.7
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 1.4e-109 401.4 577 44.9
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.0e-108 397.5 587 44.3
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 4.6e-108 396.4 707 40.3
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 7.8e-108 395.6 592 43.6
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 3.9e-107 393.3 548 44.0
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 4.3e-106 389.8 589 43.0
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 4.0e-104 383.3 594 42.9
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 5.2e-104 382.9 617 42.3
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.8e-104 382.5 616 42.2
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 5.8e-103 379.4 680 39.6
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 7.5e-103 379.0 613 40.5
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 3.7e-102 376.7 712 38.2
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 5.4e-101 372.9 669 40.4
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.5e-100 370.2 674 39.9
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 3.6e-97 360.1 706 39.4
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 1.8e-96 357.8 576 41.7
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.3e-96 357.5 674 39.3
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 2.3e-96 357.5 699 37.9
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.3e-94 351.7 589 40.2
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 6.4e-94 349.4 597 40.5
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 1.9e-93 347.8 710 36.5
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 5.1e-91 339.7 572 40.9
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 7.3e-90 335.9 726 37.7
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.2e-89 335.1 594 38.7
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 2.1e-89 334.3 720 37.9
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 3.1e-88 330.5 700 36.9
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 3.1e-88 330.5 709 37.0
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 1.5e-87 328.2 692 38.0
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.5e-87 328.2 787 35.3
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 9.9e-87 325.5 621 38.3
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 1.6e-81 308.1 524 39.9
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 6.2e-81 306.2 701 35.5
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 1.1e-80 305.4 658 36.6
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 3.1e-80 303.9 534 37.5
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 5.8e-79 299.7 709 35.4
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 5.6e-74 283.1 691 34.0
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 2.2e-70 271.2 592 35.8
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 3.8e-70 270.4 444 40.8
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 4.6e-68 263.5 640 35.8
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 1.9e-66 258.1 655 33.1
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 4.3e-66 256.9 770 32.1
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.3e-65 255.4 440 37.7
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 2.1e-65 254.6 580 34.3
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 3.6e-65 253.8 569 35.7
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.1e-64 252.3 446 39.5
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 4.0e-64 250.4 576 33.3
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 4.0e-64 250.4 625 32.5
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 7.6e-63 246.1 574 34.8
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 9.9e-63 245.7 554 35.2
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 4.9e-62 243.4 569 34.6
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 5.5e-61 240.0 725 32.7
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 1.6e-60 238.4 709 32.6
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 3.5e-60 237.3 587 33.2
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 7.9e-60 236.1 678 33.8
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 5.1e-59 233.4 570 33.7
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 5.1e-59 233.4 616 32.0
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 1.5e-58 231.9 711 32.1
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 6.2e-57 226.5 587 34.1
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 1.1e-56 225.7 543 33.5
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 1.8e-56 224.9 579 34.2
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 9.0e-56 222.6 630 31.3
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 4.5e-55 220.3 674 32.2
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 5.8e-55 219.9 576 34.4
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 8.4e-54 216.1 630 30.8
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 8.4e-54 216.1 630 30.8
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 3.2e-53 214.2 496 35.1
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 4.2e-53 213.8 669 31.1
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 7.1e-53 213.0 633 31.1
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 2.7e-52 211.1 527 33.0
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 2.3e-51 208.0 528 34.1
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 2.5e-50 204.5 726 30.9
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 2.5e-50 204.5 671 30.6
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 5.3e-48 196.8 381 37.8
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 7.9e-36 156.4 300 37.0
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 1.8e-35 155.2 297 37.0
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 5.3e-32 143.7 220 40.0
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 1.2e-31 142.5 482 30.5
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 9.7e-26 122.9 788 24.7
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 1.8e-24 118.6 372 27.7
Psat0s1200g0040 Pisum sativum HOM05D005109 ORTHO05D006084 2.8e-17 94.7 123 51.2
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 3.7e-17 94.4 556 23.7
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 3.5e-15 87.8 290 28.6
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 1.0e-14 86.3 173 37.0
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 4.8e-09 67.4 75 52.0
Psat6g214080 Pisum sativum HOM05D001701 ORTHO05D007490 2.7e-07 61.6 70 51.4
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 6.5e-06 57.0 292 28.8


User provided reference genes

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