Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 8.2e-99 363.6 170 100.0
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 4.5e-97 357.8 170 98.2
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 1.0e-85 320.1 170 87.1
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 1.7e-83 312.8 170 86.5
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 2.2e-83 312.4 170 84.1
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 2.8e-83 312.0 170 87.1
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 2.0e-81 305.8 170 84.1
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 4.5e-81 304.7 170 84.1
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 1.0e-80 303.5 165 84.2
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 2.5e-79 298.9 163 82.8
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 3.2e-79 298.5 173 80.3
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 3.2e-79 298.5 165 82.4
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 5.5e-79 297.7 163 81.6
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 3.6e-78 295.0 169 82.2
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 3.6e-78 295.0 163 82.8
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 3.6e-78 295.0 163 82.8
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 4.7e-78 294.7 170 82.4
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 6.1e-78 294.3 170 81.2
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 1.8e-77 292.7 170 79.4
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 8.8e-77 290.4 170 78.2
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 2.0e-76 289.3 170 77.6
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 5.7e-76 287.7 165 81.2
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 5.7e-76 287.7 171 81.9
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 5.7e-76 287.7 168 80.4
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 7.5e-76 287.3 163 81.0
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 9.7e-76 287.0 170 77.1
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 2.2e-75 285.8 168 82.7
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 3.7e-75 285.0 165 79.4
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 4.8e-75 284.6 171 78.4
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 6.3e-75 284.3 171 81.3
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 8.2e-75 283.9 171 80.1
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 7.0e-74 280.8 165 77.0
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 7.0e-74 280.8 170 77.1
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 2.7e-73 278.9 165 76.4
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 4.5e-73 278.1 165 79.4
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 4.5e-73 278.1 170 76.5
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 5.9e-73 277.7 170 75.9
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 5.9e-73 277.7 170 77.1
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 1.0e-72 276.9 165 78.2
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 2.2e-72 275.8 165 78.2
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 2.2e-72 275.8 171 73.1
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 2.2e-72 275.8 163 77.9
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 2.9e-72 275.4 162 77.2
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 3.2e-71 271.9 170 75.3
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 3.2e-71 271.9 165 73.9
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 4.2e-71 271.6 165 73.9
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 9.4e-71 270.4 168 75.0
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 9.4e-71 270.4 171 71.3
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 1.6e-70 269.6 168 75.6
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 4.7e-70 268.1 165 77.0
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 1.0e-69 266.9 167 76.0
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 6.8e-69 264.2 171 73.7
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 6.8e-69 264.2 170 74.7
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 2.0e-68 262.7 166 75.3
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 2.0e-68 262.7 166 75.3
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 4.4e-68 261.5 165 73.9
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 9.8e-68 260.4 166 71.1
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 1.7e-67 259.6 170 72.4
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 2.8e-67 258.8 166 71.1
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 3.7e-67 258.5 166 72.9
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 3.7e-67 258.5 162 74.1
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 4.8e-67 258.1 146 82.2
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 6.3e-67 257.7 162 72.2
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 7.0e-66 254.2 163 69.9
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 2.7e-65 252.3 159 72.3
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 7.7e-65 250.8 160 71.2
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 1.0e-64 250.4 160 72.5
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.3e-64 250.0 169 70.4
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 1.7e-64 249.6 158 71.5
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 2.2e-64 249.2 159 71.7
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 2.9e-64 248.8 168 69.0
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 6.5e-64 247.7 170 70.0
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 8.5e-64 247.3 160 71.2
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 1.1e-63 246.9 160 70.6
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 1.9e-63 246.1 166 66.9
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 4.2e-63 245.0 166 67.5
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 5.5e-63 244.6 164 70.7
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 5.5e-63 244.6 166 67.5
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 8.0e-62 240.7 168 68.5
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 3.0e-61 238.8 162 70.4
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 4.0e-61 238.4 168 67.9
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 8.3e-59 230.7 169 66.9
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 5.4e-58 228.0 164 66.5
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 7.0e-58 227.6 142 73.9
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 7.0e-58 227.6 156 70.5
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 9.2e-58 227.3 164 65.9
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 1.2e-57 226.9 140 74.3
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 5.9e-57 224.6 167 64.1
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 7.7e-57 224.2 139 72.7
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 6.6e-56 221.1 139 71.9
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 1.5e-55 219.9 167 64.1
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 3.3e-55 218.8 166 63.9
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.2e-54 216.9 161 64.0
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 2.1e-54 216.1 165 63.0
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 3.0e-53 212.2 160 64.4
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 8.9e-53 210.7 161 62.1
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 1.5e-52 209.9 161 56.5
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 4.4e-52 208.4 169 62.1
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 7.5e-52 207.6 129 76.7
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 3.7e-51 205.3 166 61.4
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 4.1e-50 201.8 129 70.5
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 2.0e-49 199.5 168 59.5
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 6.6e-48 194.5 118 73.7
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 5.6e-47 191.4 174 57.5
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 1.0e-45 187.2 163 52.1
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 8.3e-43 177.6 165 51.5
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 4.1e-42 175.3 163 51.5
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.2e-41 173.7 156 57.1
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 1.7e-40 169.9 164 47.0
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 4.0e-37 158.7 143 54.5
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 4.9e-35 151.8 166 48.2
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 5.4e-34 148.3 160 46.9
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 2.1e-33 146.4 89 77.5
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.0e-32 144.1 85 78.8
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 3.0e-32 142.5 130 57.7
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 9.9e-28 127.5 109 58.7
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 3.4e-20 102.4 152 40.8
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 2.4e-18 96.3 50 80.0
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 2.8e-14 82.8 119 42.9
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 5.3e-13 78.6 44 79.5


User provided reference genes

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