Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SQPI4R Arachis hypogaea HOM05D000522 ORTHO05D086323 3.0e-34 147.9 73 100.0
arahy.Tifrunner.gnm1.ann1.ZDY7G4 Arachis hypogaea HOM05D000522 ORTHO05D087342 2.2e-29 131.7 72 90.3
arahy.Tifrunner.gnm1.ann1.94BWWR Arachis hypogaea HOM05D000522 ORTHO05D000565 1.1e-23 112.8 78 76.9
arahy.Tifrunner.gnm1.ann1.ABUQ6J Arachis hypogaea HOM05D000522 ORTHO05D000565 4.1e-23 110.9 83 72.3
TPR.G27272 Trifolium pratense HOM05D000522 ORTHO05D000565 1.5e-12 75.9 67 64.2
Glyma.03G117300 Glycine max HOM05D000522 ORTHO05D000565 2.5e-12 75.1 67 61.2
Ca_23121_v3 Cicer arietinum L. HOM05D001289 ORTHO05D000565 9.5e-12 73.2 67 61.2
Medtr8g005990 Medicago truncatula HOM05D000522 ORTHO05D000565 9.5e-12 73.2 67 61.2
Lj3g0004977 Lotus japonicus HOM05D000522 ORTHO05D000565 2.1e-11 72.0 67 61.2
Psat4g208800 Pisum sativum HOM05D000522 ORTHO05D000565 2.1e-11 72.0 68 60.3
VMungo0331G0208 Vigna mungo HOM05D000522 ORTHO05D000565 4.7e-11 70.9 67 59.7
FvH4_7g10610 Fragaria vesca HOM05D000522 ORTHO05D000565 1.0e-10 69.7 80 48.8
Lalb_Chr13g0290401 Lupinus albus HOM05D000522 ORTHO05D000565 1.8e-10 68.9 67 58.2
ClCG03G012360 Citrullus lanatus HOM05D000522 ORTHO05D000565 3.1e-10 68.2 62 58.1
Sabra14G0041700 Salix brachista HOM05D000522 ORTHO05D000565 3.1e-10 68.2 67 56.7
FAN06G1558 Fragaria x ananassa HOM05D000522 ORTHO05D000565 6.8e-10 67.0 62 58.1
Thecc.01G387000 Theobroma cacao HOM05D000522 ORTHO05D000565 8.9e-10 66.6 71 54.9
Potri.014G057400 Populus trichocarpa HOM05D000522 ORTHO05D000565 1.5e-09 65.9 67 56.7
FAN03G0864 Fragaria x ananassa HOM05D000522 ORTHO05D000565 2.0e-09 65.5 62 56.5
FAN10G3502 Fragaria x ananassa HOM05D000522 ORTHO05D000565 2.0e-09 65.5 62 56.5
FAN10G0114 Fragaria x ananassa HOM05D000522 ORTHO05D000565 2.6e-09 65.1 67 53.7
Phvul.010G055600 Phaseolus vulgaris HOM05D000522 ORTHO05D000565 2.6e-09 65.1 67 55.2
Sed0013979 Sechium edule HOM05D000522 ORTHO05D000565 2.6e-09 65.1 67 53.7
Migut.B01570 Erythranthe guttata HOM05D000522 ORTHO05D000565 9.8e-09 63.2 80 42.5
Atru.chr5.205 Acer truncatum HOM05D000522 ORTHO05D000565 2.2e-08 62.0 67 49.3
MELO3C015086.2 Cucumis melo HOM05D000522 ORTHO05D000565 2.2e-08 62.0 64 53.1
CsaV3_1G043650 Cucumis sativus L. HOM05D000522 ORTHO05D000565 2.2e-08 62.0 64 53.1
QL04p035366 Quercus lobata HOM05D000522 ORTHO05D000565 2.2e-08 62.0 67 50.7
MSTRG.20713 Avicennia marina HOM05D000522 ORTHO05D000565 2.9e-08 61.6 71 46.5
Gohir.A11G077600 Gossypium hirsutum HOM05D000522 ORTHO05D000565 2.9e-08 61.6 67 52.2
Gohir.D11G082000 Gossypium hirsutum HOM05D000522 ORTHO05D000565 2.9e-08 61.6 67 52.2
Gorai.007G087700 Gossypium raimondii HOM05D000522 ORTHO05D000565 2.9e-08 61.6 67 52.2
Dinv44102 Davidia involucrata HOM05D000522 ORTHO05D000565 3.7e-08 61.2 67 50.7
DCAR_031875 Daucus carota HOM05D000522 ORTHO05D000565 4.9e-08 60.8 67 50.7
RcHm_v2.0_Chr1g0348451 Rosa chinensis HOM05D000522 ORTHO05D000565 4.9e-08 60.8 64 51.6
Prupe.2G134700 Prunus persica HOM05D000522 ORTHO05D000565 6.4e-08 60.5 64 50.0
CANSAT21G0552 Cannabis sativa HOM05D000522 ORTHO05D000565 8.3e-08 60.1 67 50.7
Cpa.g.sc218.2 Carica papaya HOM05D000522 ORTHO05D000565 8.3e-08 60.1 71 47.9
CiPaw.14G024000 Carya illinoinensis HOM05D000522 ORTHO05D000565 8.3e-08 60.1 67 47.8
Lsat_1_v5_gn_3_129500 Lactuca sativa HOM05D000522 ORTHO05D000565 8.3e-08 60.1 71 49.3
MD07G1111300 Malus domestica HOM05D000522 ORTHO05D000565 8.3e-08 60.1 64 51.6
TWI59G0792 Tripterygium wilfordii HOM05D000522 ORTHO05D000565 8.3e-08 60.1 64 51.6
DCAR_031874 Daucus carota HOM05D000522 ORTHO05D000565 1.9e-07 58.9 67 47.8
Oeu063214.1 Olea europaea HOM05D000522 ORTHO05D000565 4.1e-07 57.8 67 47.8
Actinidia33489 Actinidia chinensis HOM05D000522 ORTHO05D000565 5.4e-07 57.4 67 47.8
CSS0040568 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D000565 5.4e-07 57.4 62 50.0
CSS0012210 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D000565 7.0e-07 57.0 62 50.0
CSS0040751 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D000565 7.0e-07 57.0 62 50.0
Nn1g00957 Nelumbo nucifera HOM05D000522 ORTHO05D000565 7.0e-07 57.0 67 47.8
Rhsim01G0136100 Rhododendron simsii HOM05D000522 ORTHO05D000565 9.2e-07 56.6 67 47.8
Nitab4.5_0000381g0230 Nicotiana tabacum HOM05D000522 ORTHO05D000565 1.2e-06 56.2 70 40.0
Manes.05G051200 Manihot esculenta HOM05D000522 ORTHO05D000565 1.6e-06 55.8 67 50.7
AUR62009362 Chenopodium quinoa HOM05D000522 ORTHO05D000565 2.0e-06 55.5 67 43.3
Duzib133G0148 Durio zibethinus HOM05D000522 ORTHO05D000565 2.0e-06 55.5 67 49.3
Peaxi162Scf00146g00717 Petunia axillaris HOM05D000522 ORTHO05D000565 2.0e-06 55.5 71 42.3
SGA_v2.0_scaffold153G36947 Striga asiatica HOM05D000522 ORTHO05D000565 2.0e-06 55.5 71 45.1
vmacro21043 Vaccinium macrocarpon HOM05D000522 ORTHO05D000565 2.0e-06 55.5 83 39.8
CSS0040220 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D000565 2.7e-06 55.1 67 46.3
THA.LOC104802480 Tarenaya hassleriana HOM05D000522 ORTHO05D000565 2.7e-06 55.1 67 46.3
Ciclev10020604m.g Citrus clementina HOM05D000522 ORTHO05D000565 3.5e-06 54.7 67 43.3
Haze_02736 Corylus avellana HOM05D000522 ORTHO05D000565 3.5e-06 54.7 67 49.3
Potri.001G156900 Populus trichocarpa HOM05D000522 ORTHO05D000565 3.5e-06 54.7 67 46.3
CAN.G899.20 Capsicum annuum HOM05D000522 ORTHO05D000565 4.6e-06 54.3 67 44.8
Cfa011127 Carpinus fangiana HOM05D000522 ORTHO05D000565 4.6e-06 54.3 67 49.3
FAN01G0593 Fragaria x ananassa HOM05D000522 ORTHO05D000565 4.6e-06 54.3 95 37.9
FAN06G3642 Fragaria x ananassa HOM05D000522 ORTHO05D000565 4.6e-06 54.3 95 37.9
GSVIVG01018212001 Vitis vinifera HOM05D000522 ORTHO05D000565 4.6e-06 54.3 67 46.3
AUR62023043 Chenopodium quinoa HOM05D000522 ORTHO05D000565 6.0e-06 53.9 67 41.8
Lj7A734T62 Lonicera japonica HOM05D000522 ORTHO05D000565 7.8e-06 53.5 71 45.1
Lj5g0011513 Lotus japonicus HOM05D000522 ORTHO05D000565 7.8e-06 53.5 93 35.5
SalBow5G1143 Salvia bowleyana HOM05D000522 ORTHO05D000565 7.8e-06 53.5 67 44.8
TAR629G0620 Trochodendron aralioides HOM05D000522 ORTHO05D000565 7.8e-06 53.5 67 46.3
GSVIVG01004719001 Vitis vinifera HOM05D000522 ORTHO05D000565 7.8e-06 53.5 89 39.3


User provided reference genes

Program Settings