Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SPK719 Arachis hypogaea HOM05D005553 ORTHO05D006866 2.8e-235 818.1 397 100.0
arahy.Tifrunner.gnm1.ann1.YI9T1V Arachis hypogaea HOM05D005553 ORTHO05D006866 5.4e-210 734.2 404 89.4
arahy.Tifrunner.gnm1.ann1.ET68I8 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.6e-201 706.1 390 89.2
arahy.Tifrunner.gnm1.ann1.T3HSIJ Arachis hypogaea HOM05D005553 ORTHO05D006866 3.0e-176 622.1 375 81.6
arahy.Tifrunner.gnm1.ann1.K25WW2 Arachis hypogaea HOM05D005553 ORTHO05D006866 3.6e-174 615.1 375 80.5
arahy.Tifrunner.gnm1.ann1.DF0SS3 Arachis hypogaea HOM05D005553 ORTHO05D006866 3.1e-157 558.9 391 75.2
arahy.Tifrunner.gnm1.ann1.B0WXN9 Arachis hypogaea HOM05D005553 ORTHO05D006866 8.2e-126 454.5 366 63.4
Lalb_Chr03g0041571 Lupinus albus HOM05D005553 ORTHO05D006866 5.2e-120 435.3 375 60.8
arahy.Tifrunner.gnm1.ann1.62F6YN Arachis hypogaea HOM05D005553 ORTHO05D006866 5.7e-119 431.8 350 63.1
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 4.5e-116 422.2 379 59.1
Lj1g0021333 Lotus japonicus HOM05D005553 ORTHO05D006866 3.0e-112 409.5 380 58.2
Glyma.18G166600 Glycine max HOM05D005553 ORTHO05D006866 2.8e-110 402.9 380 56.1
Phvul.008G130400 Phaseolus vulgaris HOM05D005553 ORTHO05D006866 1.6e-108 397.1 376 57.2
Glyma.08G349700 Glycine max HOM05D005553 ORTHO05D006866 2.3e-107 393.3 377 57.0
VMungo1383G1602 Vigna mungo HOM05D005553 ORTHO05D006866 2.9e-107 392.9 377 56.0
arahy.Tifrunner.gnm1.ann1.UUY44J Arachis hypogaea HOM05D005553 ORTHO05D006866 1.5e-106 390.6 238 81.9
Medtr7g056117 Medicago truncatula HOM05D005553 ORTHO05D006866 7.2e-106 388.3 377 56.2
Haze_24835 Corylus avellana HOM05D005553 ORTHO05D006866 9.5e-106 387.9 383 53.5
Ca_24091_v3 Cicer arietinum L. HOM05D005553 ORTHO05D006866 2.8e-105 386.3 377 56.0
Haze_24838 Corylus avellana HOM05D005553 ORTHO05D006866 6.1e-105 385.2 385 53.2
Cfa002842 Carpinus fangiana HOM05D005553 ORTHO05D006866 4.0e-104 382.5 380 53.4
Psat3g147960 Pisum sativum HOM05D005553 ORTHO05D006866 4.0e-104 382.5 377 56.0
CiPaw.03G146800 Carya illinoinensis HOM05D005553 ORTHO05D006866 4.4e-103 379.0 372 52.2
CANSAT01G0440 Cannabis sativa HOM05D005553 ORTHO05D006866 2.9e-99 366.3 383 50.4
Dinv12662 Davidia involucrata HOM05D005553 ORTHO05D006866 8.6e-99 364.8 387 49.9
TPR.G6452 Trifolium pratense HOM05D005553 ORTHO05D006866 4.3e-98 362.5 401 51.6
Lj2A1127T50 Lonicera japonica HOM05D005553 ORTHO05D006866 2.3e-96 356.7 385 49.4
CSS0002030 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 6.8e-96 355.1 379 49.3
Nn1g07927 Nelumbo nucifera HOM05D005553 ORTHO05D006866 8.9e-96 354.8 385 49.9
Prupe.8G200200 Prunus persica HOM05D005553 ORTHO05D006866 3.4e-95 352.8 385 48.6
PGR044G2083 Punica granatum HOM05D005553 ORTHO05D006866 9.8e-95 351.3 360 50.0
MD10G1161200 Malus domestica HOM05D005553 ORTHO05D006866 2.9e-94 349.7 383 49.6
Eucgr.K02143 Eucalyptus grandis HOM05D005553 ORTHO05D006866 4.1e-93 345.9 378 49.2
CsaV3_6G002380 Cucumis sativus L. HOM05D005553 ORTHO05D006866 2.0e-92 343.6 381 48.3
DCAR_023559 Daucus carota HOM05D005553 ORTHO05D006866 2.0e-92 343.6 381 48.8
Cpa.g.sc8.131 Carica papaya HOM05D005553 ORTHO05D006866 2.7e-92 343.2 384 49.7
Ciclev10019403m.g Citrus clementina HOM05D005553 ORTHO05D006866 2.7e-92 343.2 363 50.7
HanXRQChr07g0189551 Helianthus annuus HOM05D005553 ORTHO05D006866 3.5e-92 342.8 379 48.3
MELO3C020015.2 Cucumis melo HOM05D005553 ORTHO05D006866 6.0e-92 342.0 382 48.2
Manes.13G047900 Manihot esculenta HOM05D005553 ORTHO05D006866 1.7e-91 340.5 351 51.3
BcaC05g29748 Brassica carinata HOM05D005553 ORTHO05D006866 2.3e-91 340.1 363 50.1
PGSC0003DMG400017493 Solanum tuberosum HOM05D005553 ORTHO05D006866 2.3e-91 340.1 342 50.6
TAR365G1156 Trochodendron aralioides HOM05D005553 ORTHO05D006866 2.3e-91 340.1 337 53.4
THA.LOC104818968 Tarenaya hassleriana HOM05D005553 ORTHO05D006866 3.0e-91 339.7 386 49.2
TWI36G0825 Tripterygium wilfordii HOM05D005553 ORTHO05D006866 8.6e-91 338.2 379 49.3
Solyc09g059600.4 Solanum lycopersicum HOM05D005553 ORTHO05D006866 1.1e-90 337.8 342 50.0
Sopen09g022770 Solanum pennellii HOM05D005553 ORTHO05D006866 1.1e-90 337.8 342 50.0
Dinv19184 Davidia involucrata HOM05D005553 ORTHO05D006866 1.9e-90 337.0 388 46.6
PSO063G5023 Papaver somniferum HOM05D005553 ORTHO05D006866 1.9e-90 337.0 382 47.1
Sp3g06120 Schrenkiella parvula HOM05D005553 ORTHO05D006866 1.9e-90 337.0 388 48.2
Sed0021986 Sechium edule HOM05D005553 ORTHO05D006866 2.5e-90 336.7 383 48.3
Aqoxy2G03234 Aquilegia oxysepala HOM05D005553 ORTHO05D006866 4.3e-90 335.9 385 46.5
PSO782G3165 Papaver somniferum HOM05D005553 ORTHO05D006866 4.3e-90 335.9 382 47.4
Hma1.2p1_1018F.1_g248400 Hydrangea macrophylla HOM05D005553 ORTHO05D006866 5.6e-90 335.5 382 48.2
vmacro14742 Vaccinium macrocarpon HOM05D005553 ORTHO05D006866 5.6e-90 335.5 376 48.7
Oeu023098.1 Olea europaea HOM05D005553 ORTHO05D006866 1.6e-89 334.0 381 47.8
PSO339G3667 Papaver somniferum HOM05D005553 ORTHO05D006866 6.2e-89 332.0 387 46.8
Thhalv10020331m.g Eutrema salsugineum HOM05D005553 ORTHO05D006866 8.0e-89 331.6 386 48.7
A05p41030 Brassica napus HOM05D005553 ORTHO05D006866 1.1e-88 331.3 364 50.5
BraA05t22829Z Brassica rapa HOM05D005553 ORTHO05D006866 1.4e-88 330.9 386 48.4
MSTRG.17999 Avicennia marina HOM05D005553 ORTHO05D006866 1.2e-87 327.8 349 50.1
CAN.G5.44 Capsicum annuum HOM05D005553 ORTHO05D006866 5.8e-87 325.5 344 48.8
QL09p052121 Quercus lobata HOM05D005553 ORTHO05D006866 7.5e-87 325.1 284 58.1
Thecc.01G222300 Theobroma cacao HOM05D005553 ORTHO05D006866 7.5e-87 325.1 383 48.3
BcaC05g29847 Brassica carinata HOM05D005553 ORTHO05D006866 9.8e-87 324.7 389 49.1
GSVIVG01038357001 Vitis vinifera HOM05D005553 ORTHO05D006866 1.7e-86 323.9 318 53.8
SalBow3G3653 Salvia bowleyana HOM05D005553 ORTHO05D006866 2.9e-86 323.2 387 44.7
Cc01_g16820 Coffea canephora HOM05D005553 ORTHO05D006866 3.7e-86 322.8 384 47.1
C05p60190 Brassica napus HOM05D005553 ORTHO05D006866 4.9e-86 322.4 388 47.9
BolC5t34669H Brassica oleracea HOM05D005553 ORTHO05D006866 4.9e-86 322.4 388 47.9
CSS0038931 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 6.4e-86 322.0 375 46.9
CARHR081820 Cardamine hirsuta HOM05D005553 ORTHO05D006866 6.4e-86 322.0 388 46.4
RcHm_v2.0_Chr6g0284311 Rosa chinensis HOM05D005553 ORTHO05D006866 8.3e-86 321.6 377 47.5
QL09p052989 Quercus lobata HOM05D005553 ORTHO05D006866 1.4e-85 320.9 284 57.7
Atru.chr6.1417 Acer truncatum HOM05D005553 ORTHO05D006866 1.9e-85 320.5 366 47.5
COL.COLO4_15644 Corchorus olitorius HOM05D005553 ORTHO05D006866 2.4e-85 320.1 380 45.3
Potri.002G245000 Populus trichocarpa HOM05D005553 ORTHO05D006866 3.2e-85 319.7 365 49.0
MBI06_g04543_MAGBIO Magnolia biondii HOM05D005553 ORTHO05D006866 4.1e-85 319.3 387 46.5
Carub.0003s0670 Capsella rubella HOM05D005553 ORTHO05D006866 9.2e-85 318.2 388 46.4
Ah.08g214520 Amaranthus hybridus HOM05D005553 ORTHO05D006866 1.2e-84 317.8 374 45.5
AT3G07180 Arabidopsis thaliana HOM05D005553 ORTHO05D006866 1.6e-84 317.4 388 46.1
FAN27G0725 Fragaria x ananassa HOM05D005553 ORTHO05D006866 2.1e-84 317.0 375 46.7
Nitab4.5_0000045g0420 Nicotiana tabacum HOM05D005553 ORTHO05D006866 2.1e-84 317.0 365 46.3
AL3G18430 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 3.5e-84 316.2 386 46.1
Sc05g0002010 Simmondsia chinensis HOM05D005553 ORTHO05D006866 3.5e-84 316.2 391 45.3
Nitab4.5_0000345g0010 Nicotiana tabacum HOM05D005553 ORTHO05D006866 6.0e-84 315.5 370 46.2
Hund05570 Selenicereus undatus HOM05D005553 ORTHO05D006866 5.1e-83 312.4 367 46.3
AL384U10020 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 8.6e-83 311.6 386 45.9
Lsat_1_v5_gn_9_13060 Lactuca sativa HOM05D005553 ORTHO05D006866 2.5e-82 310.1 382 45.3
ECA247G0750 Erigeron canadensis HOM05D005553 ORTHO05D006866 5.6e-82 308.9 328 50.9
Gohir.A07G200000 Gossypium hirsutum HOM05D005553 ORTHO05D006866 5.6e-82 308.9 380 46.3
Rhsim01G0254300 Rhododendron simsii HOM05D005553 ORTHO05D006866 5.6e-82 308.9 299 53.5
Aa31LG5G17740 Aethionema arabicum HOM05D005553 ORTHO05D006866 9.5e-82 308.1 386 45.9
Duzib138G1946 Durio zibethinus HOM05D005553 ORTHO05D006866 9.5e-82 308.1 372 46.2
FAN15G3597 Fragaria x ananassa HOM05D005553 ORTHO05D006866 1.6e-81 307.4 381 45.9
Duzib211G0174 Durio zibethinus HOM05D005553 ORTHO05D006866 2.1e-81 307.0 366 46.7
Gorai.001G232700 Gossypium raimondii HOM05D005553 ORTHO05D006866 2.1e-81 307.0 380 46.6
Sabra02G0186400 Salix brachista HOM05D005553 ORTHO05D006866 3.6e-81 306.2 341 49.6
FvH4_2g18680 Fragaria vesca HOM05D005553 ORTHO05D006866 1.4e-80 304.3 379 44.9
FAN24G0205 Fragaria x ananassa HOM05D005553 ORTHO05D006866 1.4e-80 304.3 379 44.9
Gohir.D07G206400 Gossypium hirsutum HOM05D005553 ORTHO05D006866 1.4e-80 304.3 380 46.3
Migut.N00626 Erythranthe guttata HOM05D005553 ORTHO05D006866 5.2e-80 302.4 375 45.1
CDE08G1475 Ceratophyllum demersum HOM05D005553 ORTHO05D006866 8.3e-78 295.0 381 41.2
ATR0609G062 Amborella trichopoda HOM05D005553 ORTHO05D006866 1.6e-76 290.8 370 43.0
Os01g0907300 Oryza sativa ssp. japonica HOM05D005553 ORTHO05D006866 1.7e-75 287.3 346 47.1
Zm00001eb365330 Zea mays HOM05D005553 ORTHO05D006866 1.6e-73 280.8 301 50.2
ClCG09G008830 Citrullus lanatus HOM05D005553 ORTHO05D006866 3.6e-73 279.6 383 41.3
SHI14561 Sapria himalayana HOM05D005553 ORTHO05D006866 6.2e-73 278.9 375 42.7
EL10Ac7g17878 Beta vulgaris HOM05D005553 ORTHO05D006866 2.0e-71 273.9 380 41.8
Peaxi162Scf00238g00217 Petunia axillaris HOM05D005553 ORTHO05D006866 7.8e-68 261.9 271 50.2
Actinidia23714 Actinidia chinensis HOM05D005553 ORTHO05D006866 3.9e-67 259.6 361 41.8
QL05p022419 Quercus lobata HOM05D005553 ORTHO05D006866 1.1e-61 241.5 226 53.1
Potri.002G244801 Populus trichocarpa HOM05D005553 ORTHO05D006866 3.2e-61 240.0 191 60.7
QL02p097148 Quercus lobata HOM05D005553 ORTHO05D006866 4.6e-60 236.1 227 52.9
Actinidia09473 Actinidia chinensis HOM05D005553 ORTHO05D006866 2.3e-59 233.8 179 62.6
DCAR_000631 Daucus carota HOM05D005553 ORTHO05D006866 2.1e-57 227.3 381 37.3
Pp3c13_19160 Physcomitrium patens HOM05D005553 ORTHO05D006866 3.8e-54 216.5 313 39.9
SMO353G0187 Selaginella moellendorffii HOM05D005553 ORTHO05D006866 1.1e-50 204.9 314 37.3
AUR62001118 Chenopodium quinoa HOM05D005553 ORTHO05D006866 1.9e-50 204.1 279 39.4
HPP92_001410 Vanilla planifolia HOM05D005553 ORTHO05D006866 9.0e-48 195.3 219 50.7
AagrBONN_evm.TU.Sc2ySwM_117.1632 Anthoceros agrestis HOM05D005553 ORTHO05D006866 4.5e-47 193.0 346 36.1
Mapoly0045s0104 Marchantia polymorpha HOM05D005553 ORTHO05D006866 1.4e-45 188.0 376 33.8
unitig_0.g372 Utricularia gibba HOM05D005553 ORTHO05D006866 4.5e-39 166.4 242 38.4
AUR62016558 Chenopodium quinoa HOM05D005553 ORTHO05D006866 5.8e-39 166.0 294 35.4
CBR_g46590 Chara braunii HOM05D005553 ORTHO05D006866 7.6e-39 165.6 176 48.3
arahy.Tifrunner.gnm1.ann1.T67Q9P Arachis hypogaea HOM05D010413 ORTHO05D014444 3.2e-13 80.5 45 93.3
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 3.2e-13 80.5 52 61.5
SEGI_35984 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 5.5e-13 79.7 168 34.5
EL10Ac7g17877 Beta vulgaris HOM05D005553 ORTHO05D006866 7.2e-13 79.3 56 58.9
arahy.Tifrunner.gnm1.ann1.4E64VF Arachis hypogaea HOM05D010413 ORTHO05D087745 9.4e-13 79.0 45 91.1
arahy.Tifrunner.gnm1.ann1.B9R6EW Arachis hypogaea HOM05D005984 ORTHO05D014444 9.4e-13 79.0 45 91.1
arahy.Tifrunner.gnm1.ann1.6EF6C9 Arachis hypogaea HOM05D010413 ORTHO05D014444 1.2e-12 78.6 45 88.9
arahy.Tifrunner.gnm1.ann1.25R2K9 Arachis hypogaea HOM05D005984 ORTHO05D014444 2.1e-12 77.8 45 88.9
arahy.Tifrunner.gnm1.ann1.IHLS5N Arachis hypogaea HOM05D010413 ORTHO05D014444 2.1e-12 77.8 45 88.9
arahy.Tifrunner.gnm1.ann1.MPAX92 Arachis hypogaea HOM05D010413 ORTHO05D014444 2.1e-12 77.8 45 88.9
arahy.Tifrunner.gnm1.ann1.HYYZ0X Arachis hypogaea HOM05D010413 ORTHO05D014444 8.0e-12 75.9 45 88.9
arahy.Tifrunner.gnm1.ann1.GJFK11 Arachis hypogaea HOM05D010413 ORTHO05D087099 1.0e-11 75.5 45 86.7
arahy.Tifrunner.gnm1.ann1.QTEC4T Arachis hypogaea HOM05D010413 ORTHO05D014444 1.0e-11 75.5 45 86.7
arahy.Tifrunner.gnm1.ann1.FWSD6F Arachis hypogaea HOM05D010413 ORTHO05D019779 1.4e-11 75.1 45 86.7
arahy.Tifrunner.gnm1.ann1.J0URVC Arachis hypogaea HOM05D010413 ORTHO05D014444 2.3e-11 74.3 45 86.7
arahy.Tifrunner.gnm1.ann1.L111E7 Arachis hypogaea HOM05D010413 ORTHO05D014444 2.3e-11 74.3 45 86.7
arahy.Tifrunner.gnm1.ann1.AUS62E Arachis hypogaea HOM05D010413 ORTHO05D014444 5.2e-11 73.2 45 80.0
arahy.Tifrunner.gnm1.ann1.1IC9XV Arachis hypogaea HOM05D010413 ORTHO05D002299 6.7e-11 72.8 45 88.9
arahy.Tifrunner.gnm1.ann1.CL1AA5 Arachis hypogaea HOM05D010413 ORTHO05D014444 6.7e-11 72.8 45 80.0
arahy.Tifrunner.gnm1.ann1.M7HUWS Arachis hypogaea HOM05D002233 ORTHO05D002299 6.7e-11 72.8 45 88.9
arahy.Tifrunner.gnm1.ann1.ME0VC2 Arachis hypogaea HOM05D010413 ORTHO05D085118 6.7e-11 72.8 45 88.9
arahy.Tifrunner.gnm1.ann1.UH56EU Arachis hypogaea HOM05D002233 ORTHO05D002299 6.7e-11 72.8 45 88.9
SEGI_34191 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 8.8e-11 72.4 44 65.9
arahy.Tifrunner.gnm1.ann1.UPI3MA Arachis hypogaea HOM05D003834 ORTHO05D004483 1.5e-10 71.6 45 84.4
arahy.Tifrunner.gnm1.ann1.1YB8F2 Arachis hypogaea HOM05D010413 ORTHO05D014444 2.6e-10 70.9 45 84.4
arahy.Tifrunner.gnm1.ann1.M9QEPL Arachis hypogaea HOM05D010413 ORTHO05D002299 5.7e-10 69.7 45 86.7
arahy.Tifrunner.gnm1.ann1.BQA8LP Arachis hypogaea HOM05D025444 ORTHO05D084027 4.1e-08 63.5 38 86.8
arahy.Tifrunner.gnm1.ann1.KG0P24 Arachis hypogaea HOM05D025444 ORTHO05D087529 4.1e-08 63.5 38 86.8
arahy.Tifrunner.gnm1.ann1.NXC8T0 Arachis hypogaea HOM05D025444 ORTHO05D086225 4.1e-08 63.5 38 86.8
arahy.Tifrunner.gnm1.ann1.YK0CAK Arachis hypogaea HOM05D025444 ORTHO05D085151 4.1e-08 63.5 38 86.8
arahy.Tifrunner.gnm1.ann1.LT36IY Arachis hypogaea HOM05D010413 ORTHO05D014444 7.0e-08 62.8 46 80.4
arahy.Tifrunner.gnm1.ann1.RLV9X9 Arachis hypogaea HOM05D000054 ORTHO05D001371 1.6e-07 61.6 53 67.9
arahy.Tifrunner.gnm1.ann1.X9D9S7 Arachis hypogaea HOM05D001287 ORTHO05D002418 2.0e-07 61.2 42 83.3
arahy.Tifrunner.gnm1.ann1.MLET4L Arachis hypogaea HOM05D000054 ORTHO05D083142 2.6e-07 60.8 40 85.0
arahy.Tifrunner.gnm1.ann1.N5UMPG Arachis hypogaea HOM05D026890 ORTHO05D084813 7.7e-07 59.3 39 84.6
arahy.Tifrunner.gnm1.ann1.WT0C32 Arachis hypogaea HOM05D000207 ORTHO05D014448 7.7e-07 59.3 39 84.6
arahy.Tifrunner.gnm1.ann1.YRL4N9 Arachis hypogaea HOM05D000043 ORTHO05D001371 7.7e-07 59.3 39 84.6
arahy.Tifrunner.gnm1.ann1.CXSI0G Arachis hypogaea HOM05D000290 ORTHO05D002418 1.0e-06 58.9 43 72.1
arahy.Tifrunner.gnm1.ann1.11RBMI Arachis hypogaea HOM05D004530 ORTHO05D085463 1.3e-06 58.5 43 76.7
arahy.Tifrunner.gnm1.ann1.T8K23Z Arachis hypogaea HOM05D000043 ORTHO05D001371 1.3e-06 58.5 43 76.7
arahy.Tifrunner.gnm1.ann1.XZ6HV0 Arachis hypogaea HOM05D000043 ORTHO05D013763 2.2e-06 57.8 43 74.4
arahy.Tifrunner.gnm1.ann1.QJJN22 Arachis hypogaea HOM05D000054 ORTHO05D082761 2.9e-06 57.4 40 80.0


User provided reference genes

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