Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SP1EBN Arachis hypogaea HOM05D001033 ORTHO05D005438 1.4e-47 192.6 94 100.0
LjContig00318g0006081 Lotus japonicus HOM05D001033 ORTHO05D005438 2.0e-14 82.4 46 84.8
RcHm_v2.0_CPg0502161 Rosa chinensis HOM05D001033 ORTHO05D005438 3.4e-14 81.6 46 80.4
QL93p0270_0001 Quercus lobata HOM05D001033 ORTHO05D005438 5.9e-14 80.9 46 82.6
Glyma.13G068600 Glycine max HOM05D001033 ORTHO05D005438 7.7e-14 80.5 46 80.4
Hma1.2p1_2223F.1_g317430 Hydrangea macrophylla HOM05D001033 ORTHO05D005438 7.7e-14 80.5 46 80.4
EL10As12g24023 Beta vulgaris HOM05D001033 ORTHO05D005438 1.0e-13 80.1 46 82.6
EL10As1g23050 Beta vulgaris HOM05D001033 ORTHO05D005438 1.0e-13 80.1 46 82.6
PGR111G0123 Punica granatum HOM05D001033 ORTHO05D005438 1.0e-13 80.1 46 82.6
SalBow1G1818 Salvia bowleyana HOM05D001033 ORTHO05D005438 1.0e-13 80.1 46 82.6
DCAR_032489 Daucus carota HOM05D001033 ORTHO05D005438 1.3e-13 79.7 46 80.4
Gohir.D01G102268 Gossypium hirsutum HOM05D001033 ORTHO05D005438 1.3e-13 79.7 46 80.4
Lalb_Chr03g0039391 Lupinus albus HOM05D001033 ORTHO05D005438 1.3e-13 79.7 46 80.4
Lalb_Chr07g0192301 Lupinus albus HOM05D001033 ORTHO05D005438 1.3e-13 79.7 46 80.4
PSO548G0108 Papaver somniferum HOM05D001033 ORTHO05D005438 1.3e-13 79.7 46 80.4
Potri.013G163000 Populus trichocarpa HOM05D001033 ORTHO05D005438 1.3e-13 79.7 46 80.4
CAN.G397.97 Capsicum annuum HOM05D001033 ORTHO05D005438 1.7e-13 79.3 46 78.3
HanXRQChr00c0345g0573911 Helianthus annuus HOM05D001033 ORTHO05D005438 1.7e-13 79.3 46 78.3
HanXRQChr00c0759g0577221 Helianthus annuus HOM05D001033 ORTHO05D005438 1.7e-13 79.3 46 78.3
HanXRQChr02g0054851 Helianthus annuus HOM05D001033 ORTHO05D005438 1.7e-13 79.3 46 78.3
VMungo0498G0001 Vigna mungo HOM05D001033 ORTHO05D005438 2.2e-13 79.0 46 76.1
Gohir.1Z049599 Gossypium hirsutum HOM05D001033 ORTHO05D005438 2.9e-13 78.6 46 78.3
CAN.G835.10 Capsicum annuum HOM05D001033 ORTHO05D005438 3.8e-13 78.2 46 76.1
Medtr4g051245 Medicago truncatula HOM05D001033 ORTHO05D005438 3.8e-13 78.2 46 78.3
PGSC0003DMG400015304 Solanum tuberosum HOM05D001033 ORTHO05D005438 5.0e-13 77.8 46 76.1
Phvul.011G056516 Phaseolus vulgaris HOM05D001033 ORTHO05D005438 6.5e-13 77.4 46 73.9
Gohir.A09G102300 Gossypium hirsutum HOM05D001033 ORTHO05D005438 8.5e-13 77.0 46 76.1
Nn010s41425 Nelumbo nucifera HOM05D001033 ORTHO05D005438 8.5e-13 77.0 46 80.4
HanXRQChr11g0348981 Helianthus annuus HOM05D001033 ORTHO05D005438 1.9e-12 75.9 46 73.9
MD11G1295600 Malus domestica HOM05D001033 ORTHO05D005438 1.9e-12 75.9 46 71.7
ATCG00440 Arabidopsis thaliana HOM05D001033 ORTHO05D005438 2.5e-12 75.5 46 73.9
C02p43490 Brassica napus HOM05D001033 ORTHO05D005438 2.5e-12 75.5 46 73.9
C09p40500 Brassica napus HOM05D001033 ORTHO05D005438 2.5e-12 75.5 46 73.9
BolSC45t60863H Brassica oleracea HOM05D001033 ORTHO05D005438 2.5e-12 75.5 46 73.9
BolSC45t60948H Brassica oleracea HOM05D001033 ORTHO05D005438 2.5e-12 75.5 46 73.9
BolSC46t60995H Brassica oleracea HOM05D001033 ORTHO05D005438 2.5e-12 75.5 46 73.9
BolSC46t61040H Brassica oleracea HOM05D001033 ORTHO05D005438 2.5e-12 75.5 46 73.9
BolSC47t61102H Brassica oleracea HOM05D001033 ORTHO05D005438 2.5e-12 75.5 46 73.9
BraSC25t45843Z Brassica rapa HOM05D001033 ORTHO05D005438 2.5e-12 75.5 46 73.9
BraSC25t45872Z Brassica rapa HOM05D001033 ORTHO05D005438 2.5e-12 75.5 46 73.9
BraSC58t46415Z Brassica rapa HOM05D001033 ORTHO05D005438 2.5e-12 75.5 46 73.9
BraSC59t46597Z Brassica rapa HOM05D001033 ORTHO05D005438 2.5e-12 75.5 46 73.9
CARHR282060 Cardamine hirsuta HOM05D001033 ORTHO05D005438 2.5e-12 75.5 46 73.9
Thhalv10010825m.g Eutrema salsugineum HOM05D001033 ORTHO05D005438 4.2e-12 74.7 46 73.9
Gohir.D07G155048 Gossypium hirsutum HOM05D001033 ORTHO05D005438 4.2e-12 74.7 46 73.9
Oeu015831.1 Olea europaea HOM05D001033 ORTHO05D005438 5.5e-12 74.3 46 73.9
AL2G20690 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 7.2e-12 73.9 46 73.9
AL2G21100 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 7.2e-12 73.9 46 73.9
AL2G21480 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 7.2e-12 73.9 46 73.9
BolC7t41722H Brassica oleracea HOM05D001033 ORTHO05D005438 9.4e-12 73.6 46 71.7
BolC7t41667H Brassica oleracea HOM05D001033 ORTHO05D005438 4.6e-11 71.2 46 69.6
MD03G1163700 Malus domestica HOM05D001033 ORTHO05D005438 4.6e-11 71.2 40 80.0
Gohir.D04G084000 Gossypium hirsutum HOM05D001033 ORTHO05D005438 6.1e-11 70.9 45 73.3
Gorai.013G158200 Gossypium raimondii HOM05D001033 ORTHO05D005438 1.0e-10 70.1 46 69.6
Oeu028781.1 Olea europaea HOM05D001033 ORTHO05D005438 5.1e-10 67.8 38 84.2
BolC7t45240H Brassica oleracea HOM05D001033 ORTHO05D005438 6.7e-10 67.4 46 69.6
Gohir.D12G053450 Gossypium hirsutum HOM05D001033 ORTHO05D005438 1.1e-09 66.6 46 63.0
EL10As15g24122 Beta vulgaris HOM05D001033 ORTHO05D005438 2.5e-09 65.5 39 82.1
Solyc01g017210.1 Solanum lycopersicum HOM05D001033 ORTHO05D005438 2.5e-09 65.5 46 63.0
Gorai.005G108900 Gossypium raimondii HOM05D001033 ORTHO05D002045 7.4e-09 63.9 37 81.1
Lalb_Chr01g0022761 Lupinus albus HOM05D001033 ORTHO05D005438 7.4e-09 63.9 41 73.2
Eucgr.A02745 Eucalyptus grandis HOM05D001033 ORTHO05D005438 6.3e-08 60.8 39 69.2
HanXRQChr02g0044941 Helianthus annuus HOM05D001033 ORTHO05D002045 3.1e-07 58.5 35 77.1
HanXRQChr07g0201001 Helianthus annuus HOM05D001033 ORTHO05D002045 3.1e-07 58.5 35 77.1
HanXRQChr08g0210311 Helianthus annuus HOM05D001033 ORTHO05D002045 3.1e-07 58.5 35 77.1
HanXRQChr10g0283501 Helianthus annuus HOM05D001033 ORTHO05D002045 3.1e-07 58.5 35 77.1
HanXRQChr10g0289221 Helianthus annuus HOM05D001033 ORTHO05D002045 3.1e-07 58.5 35 77.1
HanXRQChr11g0326771 Helianthus annuus HOM05D001033 ORTHO05D002045 3.1e-07 58.5 35 77.1
HanXRQCPg0579981 Helianthus annuus HOM05D001033 ORTHO05D002045 3.1e-07 58.5 35 77.1
Gohir.D02G106150 Gossypium hirsutum HOM05D001033 ORTHO05D005438 5.3e-07 57.8 36 75.0
Peaxi162Scf00334g01211 Petunia axillaris HOM05D001033 ORTHO05D002045 5.3e-07 57.8 35 74.3
Migut.D01355 Erythranthe guttata HOM05D001033 ORTHO05D005438 1.2e-06 56.6 39 69.2
HanXRQChr00c0702g0576861 Helianthus annuus HOM05D001033 ORTHO05D002045 2.0e-06 55.8 32 81.2
Gorai.005G120500 Gossypium raimondii HOM05D001033 ORTHO05D005438 3.4e-06 55.1 67 47.8
SMO086G0042 Selaginella moellendorffii HOM05D001033 ORTHO05D005438 5.9e-06 54.3 46 58.7
SMO086G0053 Selaginella moellendorffii HOM05D001033 ORTHO05D005438 5.9e-06 54.3 46 58.7


User provided reference genes

Program Settings