Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 1.1e-250 869.4 415 100.0
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 4.3e-226 787.7 415 92.0
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.8e-200 702.6 415 81.4
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 1.2e-196 689.9 413 79.9
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 1.3e-193 679.9 415 77.8
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 1.1e-192 676.8 415 77.6
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 2.6e-191 672.2 419 76.4
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 1.7e-190 669.5 420 77.6
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 1.6e-188 662.9 419 77.1
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 1.5e-186 656.4 362 83.7
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.5e-186 656.4 410 76.8
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 1.4e-184 649.8 421 75.5
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 1.8e-184 649.4 412 76.0
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 1.8e-184 649.4 387 79.8
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 3.1e-184 648.7 410 75.9
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 6.9e-184 647.5 359 83.8
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 5.9e-183 644.4 392 78.3
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 7.7e-183 644.0 413 75.8
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 1.3e-182 643.3 409 76.0
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 2.9e-182 642.1 335 86.9
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 6.5e-182 641.0 415 74.0
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 8.5e-182 640.6 406 76.6
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 2.5e-181 639.0 359 82.7
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 5.5e-181 637.9 373 79.4
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 1.6e-180 636.3 405 77.3
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 2.1e-180 636.0 406 75.4
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 4.6e-180 634.8 414 73.9
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 1.8e-179 632.9 362 79.8
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 5.1e-179 631.3 415 72.5
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 6.7e-179 630.9 406 74.6
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 8.8e-179 630.6 359 80.8
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 2.0e-178 629.4 413 73.6
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.3e-178 628.6 408 74.0
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 3.3e-178 628.6 418 73.9
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 1.3e-177 626.7 376 78.5
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 1.7e-177 626.3 411 74.9
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 4.8e-177 624.8 406 74.1
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 6.3e-177 624.4 401 74.3
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 1.1e-176 623.6 335 85.4
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 1.1e-176 623.6 408 73.5
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 9.1e-176 620.5 335 85.4
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 9.1e-176 620.5 411 73.7
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.2e-175 620.2 410 73.7
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 3.4e-175 618.6 359 81.3
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 4.5e-175 618.2 410 73.9
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 1.3e-174 616.7 409 72.6
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.3e-174 616.7 413 71.9
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.3e-174 616.7 403 73.9
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 5.0e-174 614.8 390 74.9
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 2.5e-173 612.5 340 82.4
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 3.2e-173 612.1 408 72.8
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 5.5e-173 611.3 335 83.3
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 7.2e-173 610.9 416 71.4
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.6e-172 609.8 331 82.5
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 2.7e-172 609.0 404 73.3
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 4.7e-172 608.2 337 82.8
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 6.1e-172 607.8 393 74.0
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 7.9e-172 607.4 431 69.6
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 3.0e-171 605.5 403 72.0
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 6.7e-171 604.4 412 71.6
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 7.4e-170 600.9 337 81.9
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 7.4e-170 600.9 417 70.7
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 1.3e-169 600.1 408 71.6
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 1.7e-169 599.7 325 83.7
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 3.7e-169 598.6 323 84.5
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 8.2e-169 597.4 408 71.1
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.4e-168 596.7 342 81.0
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 5.3e-168 594.7 355 77.7
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 7.0e-168 594.3 366 75.4
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 7.0e-168 594.3 365 77.3
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 9.1e-168 594.0 414 71.5
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 1.2e-167 593.6 366 75.4
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 1.6e-167 593.2 359 76.9
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 3.5e-167 592.0 391 73.7
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 4.5e-167 591.7 391 73.4
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 1.3e-166 590.1 336 81.5
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 2.9e-166 589.0 337 80.1
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 2.9e-166 589.0 357 75.9
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 1.1e-165 587.0 336 81.0
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 1.8e-163 579.7 448 65.8
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 2.3e-163 579.3 323 81.4
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 4.0e-163 578.6 438 66.2
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 5.3e-160 568.2 384 69.3
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 4.5e-159 565.1 334 76.6
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 3.8e-158 562.0 366 74.3
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.7e-153 546.6 301 80.4
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 2.2e-153 546.2 409 66.0
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 8.3e-153 544.3 355 72.7
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 4.5e-151 538.5 293 81.9
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 3.0e-147 525.8 338 73.7
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 1.4e-144 516.9 657 46.4
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 3.1e-144 515.8 292 79.5
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.9e-141 506.5 319 70.2
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.6e-140 503.4 345 65.5
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 2.1e-140 503.1 324 69.8
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 6.8e-139 498.0 324 68.2
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 9.5e-125 451.1 323 63.8
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 2.6e-122 443.0 253 80.2
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 3.5e-111 406.0 278 71.9
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 6.4e-105 385.2 236 75.0
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 6.6e-102 375.2 292 63.7
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 9.6e-101 371.3 235 76.6
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.4e-91 340.9 359 45.7
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 3.7e-84 316.2 374 42.5
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 7.6e-82 308.5 321 45.8
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.2e-81 307.0 322 46.0
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 2.8e-76 290.0 164 81.1
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 3.0e-62 243.4 201 59.2
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.2e-55 221.5 122 78.7
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 3.0e-54 216.9 194 54.6
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 1.1e-53 214.9 341 38.7
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 1.4e-51 208.0 142 71.8
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 1.7e-49 201.1 204 52.9
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 2.6e-45 187.2 204 44.6
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 1.9e-32 144.4 85 74.1
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 8.0e-23 112.5 59 84.7
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 3.0e-17 94.0 79 54.4
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 7.5e-13 79.3 39 82.1
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 6.4e-12 76.3 62 58.1
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 8.6e-09 65.9 34 73.5
Hma1.2p1_0200F.1_g086050 Hydrangea macrophylla HOM05D006483 ORTHO05D007837 1.8e-06 58.2 68 47.1
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 1.8e-06 58.2 35 65.7
Ciclev10016000m.g Citrus clementina HOM05D000363 ORTHO05D000236 5.2e-06 56.6 132 24.2


User provided reference genes

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