Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 1.4e-122 443.0 219 100.0
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 1.3e-96 356.7 219 83.6
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 9.3e-55 217.6 227 59.9
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 5.0e-48 195.3 221 52.5
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 9.4e-47 191.0 232 50.4
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 4.6e-46 188.7 229 50.7
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.4e-45 187.2 232 50.0
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.8e-45 186.8 232 50.0
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 2.3e-45 186.4 228 50.0
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 2.3e-45 186.4 251 48.2
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 3.0e-45 186.0 218 53.2
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 3.9e-45 185.7 235 47.2
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.1e-45 185.3 232 49.6
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 8.8e-45 184.5 232 49.6
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 2.6e-44 183.0 242 49.2
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 4.4e-44 182.2 230 48.7
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 9.7e-44 181.0 245 47.3
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 2.8e-43 179.5 237 48.9
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 3.7e-43 179.1 179 54.7
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 1.1e-42 177.6 243 48.6
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.1e-42 177.6 246 47.6
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 1.4e-42 177.2 239 46.9
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 1.8e-42 176.8 239 47.7
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 2.4e-42 176.4 213 50.2
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 2.4e-42 176.4 232 48.7
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.4e-42 176.4 232 48.7
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 3.1e-42 176.0 246 47.2
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 3.1e-42 176.0 209 51.7
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 4.1e-42 175.6 233 49.4
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 5.3e-42 175.3 229 48.9
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 9.1e-42 174.5 230 49.1
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 1.2e-41 174.1 229 48.9
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 4.5e-41 172.2 198 51.0
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 7.7e-41 171.4 235 46.4
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 1.0e-40 171.0 211 49.3
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 2.2e-40 169.9 248 46.4
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 8.5e-40 167.9 231 46.3
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 1.4e-39 167.2 242 48.3
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 1.9e-39 166.8 221 48.0
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 2.5e-39 166.4 244 45.1
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 2.5e-39 166.4 238 46.6
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 5.5e-39 165.2 196 52.6
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 7.2e-39 164.9 221 47.5
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 9.4e-39 164.5 184 51.6
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 1.6e-38 163.7 214 47.2
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 1.6e-38 163.7 221 48.9
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 1.6e-38 163.7 225 46.2
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 2.1e-38 163.3 185 51.9
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 2.7e-38 162.9 141 58.9
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 7.9e-38 161.4 202 50.5
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 7.9e-38 161.4 254 42.9
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 1.0e-37 161.0 226 44.7
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 1.4e-37 160.6 216 45.4
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 1.8e-37 160.2 196 50.0
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 3.0e-37 159.5 225 45.8
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 3.0e-37 159.5 226 44.7
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 5.2e-37 158.7 224 42.9
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 6.7e-37 158.3 205 48.8
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 1.1e-36 157.5 231 45.0
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 7.4e-36 154.8 188 48.9
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 1.3e-35 154.1 221 46.2
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 1.7e-35 153.7 236 44.1
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 2.8e-35 152.9 226 44.7
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 8.2e-35 151.4 207 43.0
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 1.8e-34 150.2 224 47.8
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 5.3e-34 148.7 245 42.0
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 1.2e-33 147.5 221 48.0
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 2.0e-33 146.7 233 44.6
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 2.0e-33 146.7 151 53.6
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 2.6e-33 146.4 254 42.9
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 1.0e-32 144.4 226 46.0
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 2.2e-32 143.3 251 42.6
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 2.2e-32 143.3 235 44.3
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 2.9e-32 142.9 252 43.3
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 8.5e-32 141.4 249 43.4
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 1.1e-31 141.0 226 40.3
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 1.1e-31 141.0 236 41.5
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 4.2e-31 139.0 123 56.9
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 9.4e-31 137.9 214 46.7
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 2.7e-30 136.3 114 58.8
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 3.6e-30 136.0 247 42.9
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 6.7e-29 131.7 232 39.7
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 8.8e-29 131.3 246 43.1
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 8.8e-29 131.3 201 42.3
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 2.0e-28 130.2 241 40.2
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 3.3e-28 129.4 249 42.6
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 3.3e-28 129.4 249 42.6
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 3.3e-28 129.4 249 42.6
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 4.4e-28 129.0 232 39.2
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 5.7e-28 128.6 184 46.2
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.7e-27 127.1 170 43.5
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 2.2e-27 126.7 249 42.2
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 2.2e-27 126.7 200 42.0
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 2.8e-27 126.3 238 39.1
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 2.8e-27 126.3 170 42.9
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 6.3e-27 125.2 252 40.1
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 6.3e-27 125.2 252 40.1
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 1.1e-26 124.4 249 41.4
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 2.4e-26 123.2 251 39.4
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 1.6e-25 120.6 168 40.5
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 4.5e-25 119.0 238 37.4
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 4.5e-25 119.0 241 37.8
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 5.9e-25 118.6 224 39.3
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 5.9e-25 118.6 243 37.9
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.3e-24 117.5 217 41.9
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 1.3e-24 117.5 221 43.9
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 2.2e-24 116.7 144 47.2
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 2.2e-24 116.7 144 47.2
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 2.2e-24 116.7 144 47.2
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 2.9e-24 116.3 245 36.7
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 5.0e-24 115.5 235 40.9
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 4.2e-23 112.5 122 50.8
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 3.0e-21 106.3 147 43.5
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 2.2e-19 100.1 59 78.0
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 3.7e-19 99.4 124 45.2
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 1.1e-18 97.8 58 77.6
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 7.0e-18 95.1 195 36.9
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 2.8e-14 83.2 166 39.8
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 1.8e-13 80.5 96 47.9
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 1.5e-12 77.4 64 64.1
Phvul.004G158500 Phaseolus vulgaris HOM05D005829 ORTHO05D007246 2.0e-12 77.0 223 34.1
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 2.6e-12 76.6 177 33.3
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 6.3e-11 72.0 116 37.1
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 6.3e-11 72.0 116 37.1
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.4e-10 70.9 41 70.7
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 2.3e-08 63.5 35 71.4
Glyma.09G185300 Glycine max HOM05D005829 ORTHO05D007246 2.3e-08 63.5 223 29.1
Glyma.07G090700 Glycine max HOM05D005829 ORTHO05D007246 1.9e-07 60.5 222 31.5
SMO241G0040 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 2.5e-07 60.1 98 35.7
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 9.5e-07 58.2 232 31.5
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 2.8e-06 56.6 92 33.7
FAN22G1271 Fragaria x ananassa HOM05D038641 ORTHO05D035590 3.6e-06 56.2 55 54.5


User provided reference genes

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