Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SHY03S Arachis hypogaea HOM05D005552 ORTHO05D006743 5.8e-49 197.2 98 100.0
arahy.Tifrunner.gnm1.ann1.21BGDZ Arachis hypogaea HOM05D005552 ORTHO05D006743 4.8e-11 71.2 97 47.4
Glyma.01G183800 Glycine max HOM05D005552 ORTHO05D006743 6.3e-11 70.9 78 55.1
arahy.Tifrunner.gnm1.ann1.A2BBUY Arachis hypogaea HOM05D005552 ORTHO05D006743 1.8e-10 69.3 97 46.4
Glyma.11G058500 Glycine max HOM05D005552 ORTHO05D006743 4.1e-10 68.2 78 53.8
Lj6g0016933 Lotus japonicus HOM05D005552 ORTHO05D006743 9.1e-10 67.0 81 49.4
Lj2g0010083 Lotus japonicus HOM05D005552 ORTHO05D006743 1.2e-09 66.6 81 50.6
Lj4C139G4 Lonicera japonica HOM05D005552 ORTHO05D006743 1.0e-08 63.5 81 44.4
Lalb_Chr05g0213171 Lupinus albus HOM05D005552 ORTHO05D006743 1.3e-08 63.2 81 45.7
Gohir.D11G196500 Gossypium hirsutum HOM05D005552 ORTHO05D006743 1.7e-08 62.8 78 43.6
Psat5g241560 Pisum sativum HOM05D005552 ORTHO05D006743 1.7e-08 62.8 89 41.6
TWI09G0520 Tripterygium wilfordii HOM05D005552 ORTHO05D006743 2.9e-08 62.0 89 43.8
Phvul.002G021300 Phaseolus vulgaris HOM05D005552 ORTHO05D006743 3.8e-08 61.6 78 48.7
Potri.001G361900 Populus trichocarpa HOM05D005552 ORTHO05D006743 3.8e-08 61.6 81 44.4
Gorai.007G210400 Gossypium raimondii HOM05D005552 ORTHO05D006743 5.0e-08 61.2 78 42.3
Ca_24792_v3 Cicer arietinum L. HOM05D005552 ORTHO05D006743 6.5e-08 60.8 89 43.8
COL.COLO4_11363 Corchorus olitorius HOM05D005552 ORTHO05D006743 6.5e-08 60.8 78 42.3
Thecc.01G050800 Theobroma cacao HOM05D005552 ORTHO05D006743 8.5e-08 60.5 78 41.0
TAR628G0695 Trochodendron aralioides HOM05D005552 ORTHO05D006743 1.1e-07 60.1 78 44.9
Duzib264G1173 Durio zibethinus HOM05D005552 ORTHO05D006743 1.9e-07 59.3 78 42.3
arahy.Tifrunner.gnm1.ann1.S73BBB Arachis hypogaea HOM05D005552 ORTHO05D006743 2.5e-07 58.9 39 74.4
Cpa.g.sc6.396 Carica papaya HOM05D005552 ORTHO05D006743 2.5e-07 58.9 81 40.7
Psat1g136760 Pisum sativum HOM05D005552 ORTHO05D006743 2.5e-07 58.9 89 40.4
VMungo1215G1500 Vigna mungo HOM05D005552 ORTHO05D006743 3.2e-07 58.5 97 40.2
Nn6g32078 Nelumbo nucifera HOM05D005552 ORTHO05D006743 4.2e-07 58.2 78 42.3
Psat2g165040 Pisum sativum HOM05D005552 ORTHO05D006743 4.2e-07 58.2 89 39.3
THA.LOC104807572 Tarenaya hassleriana HOM05D005552 ORTHO05D006743 4.2e-07 58.2 97 36.1
Ciclev10025258m.g Citrus clementina HOM05D005552 ORTHO05D006743 5.5e-07 57.8 78 42.3
CiPaw.01G023200 Carya illinoinensis HOM05D005552 ORTHO05D006743 7.2e-07 57.4 78 43.6
TPR.G11337 Trifolium pratense HOM05D005552 ORTHO05D006743 7.2e-07 57.4 89 40.4
Medtr5g017970 Medicago truncatula HOM05D005552 ORTHO05D006743 9.4e-07 57.0 81 42.0
TAR376G0305 Trochodendron aralioides HOM05D005552 ORTHO05D006743 1.2e-06 56.6 97 38.1
Nitab4.5_0002715g0120 Nicotiana tabacum HOM05D005552 ORTHO05D006743 1.6e-06 56.2 96 40.6
Oeu020899.1 Olea europaea HOM05D005552 ORTHO05D006743 1.6e-06 56.2 78 43.6
Actinidia12065 Actinidia chinensis HOM05D005552 ORTHO05D006743 2.1e-06 55.8 78 41.0
Hma1.2p1_0873F.1_g231280 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 2.7e-06 55.5 81 40.7
Hma1.2p1_0873F.1_g231290 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 2.7e-06 55.5 81 40.7
Dinv39890 Davidia involucrata HOM05D005552 ORTHO05D006743 3.6e-06 55.1 78 41.0
GSVIVG01003549001 Vitis vinifera HOM05D005552 ORTHO05D006743 4.7e-06 54.7 97 35.1
FAN18G3771 Fragaria x ananassa HOM05D005552 ORTHO05D006743 6.1e-06 54.3 78 39.7
Nitab4.5_0000368g0430 Nicotiana tabacum HOM05D005552 ORTHO05D006743 8.0e-06 53.9 86 41.9
Peaxi162Scf00073g00015 Petunia axillaris HOM05D005552 ORTHO05D006743 8.0e-06 53.9 91 36.3


User provided reference genes

Program Settings