Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 9.2e-81 303.5 155 100.0
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 5.8e-51 204.5 156 72.4
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 2.9e-50 202.2 156 71.8
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 3.1e-36 155.6 157 57.3
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 2.0e-35 152.9 146 60.3
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 5.4e-33 144.8 155 56.1
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 1.2e-32 143.7 95 81.1
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 2.7e-32 142.5 111 68.5
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 7.9e-32 141.0 152 55.9
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 3.9e-31 138.7 133 59.4
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 5.1e-31 138.3 149 53.7
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 1.1e-30 137.1 133 59.4
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 1.9e-30 136.3 154 53.2
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 3.3e-30 135.6 142 57.0
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 5.6e-30 134.8 151 52.3
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 5.6e-30 134.8 151 52.3
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 1.6e-29 133.3 139 51.8
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 8.1e-29 131.0 138 52.9
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 1.8e-28 129.8 130 56.9
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 2.4e-28 129.4 134 55.2
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 2.4e-28 129.4 138 53.6
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 4.0e-28 128.6 145 51.7
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 7.6e-27 124.4 137 51.1
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 7.6e-27 124.4 124 54.0
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 1.0e-26 124.0 150 49.3
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 1.3e-26 123.6 144 48.6
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 1.7e-26 123.2 142 49.3
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 2.9e-26 122.5 124 54.0
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 3.8e-26 122.1 122 54.1
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 6.5e-26 121.3 143 50.3
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 6.5e-26 121.3 128 56.2
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 8.4e-26 120.9 117 56.4
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 8.4e-26 120.9 140 51.4
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 8.4e-26 120.9 124 52.4
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 8.4e-26 120.9 130 53.8
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 1.4e-25 120.2 154 47.4
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.9e-25 119.8 124 52.4
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 2.5e-25 119.4 128 51.6
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 2.5e-25 119.4 131 49.6
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 3.2e-25 119.0 116 56.9
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 3.2e-25 119.0 149 49.7
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 5.5e-25 118.2 134 50.7
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 5.5e-25 118.2 151 49.0
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 7.1e-25 117.9 152 48.7
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 7.1e-25 117.9 133 51.1
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 7.1e-25 117.9 134 50.0
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 9.3e-25 117.5 116 57.8
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 1.2e-24 117.1 139 47.5
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 1.2e-24 117.1 131 48.9
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 2.7e-24 115.9 156 48.1
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 2.7e-24 115.9 156 48.1
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 2.7e-24 115.9 142 45.1
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 2.7e-24 115.9 115 54.8
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 4.6e-24 115.2 142 45.1
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 7.9e-24 114.4 133 48.9
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 7.9e-24 114.4 149 47.7
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 1.0e-23 114.0 150 44.7
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 1.0e-23 114.0 109 56.0
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 3.0e-23 112.5 128 51.6
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 3.0e-23 112.5 153 47.1
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 3.9e-23 112.1 112 53.6
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 3.9e-23 112.1 112 53.6
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 3.9e-23 112.1 112 53.6
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 3.9e-23 112.1 112 53.6
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 3.9e-23 112.1 155 47.1
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 5.1e-23 111.7 112 53.6
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 5.1e-23 111.7 112 53.6
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 5.1e-23 111.7 112 53.6
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 5.1e-23 111.7 109 56.9
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 6.7e-23 111.3 112 54.5
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 6.7e-23 111.3 112 53.6
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 8.7e-23 110.9 112 52.7
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 8.7e-23 110.9 112 52.7
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 8.7e-23 110.9 112 52.7
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 8.7e-23 110.9 112 52.7
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 8.7e-23 110.9 133 50.4
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 1.1e-22 110.5 112 52.7
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 1.5e-22 110.2 150 45.3
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 1.5e-22 110.2 154 45.5
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 2.5e-22 109.4 130 47.7
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 2.5e-22 109.4 112 50.9
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 2.5e-22 109.4 112 50.9
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 2.5e-22 109.4 152 44.7
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 9.6e-22 107.5 113 53.1
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 1.3e-21 107.1 154 43.5
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 2.8e-21 105.9 131 47.3
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 3.7e-21 105.5 124 48.4
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 4.8e-21 105.1 109 52.3
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 4.8e-21 105.1 134 50.7
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 4.8e-21 105.1 116 48.3
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 8.2e-21 104.4 122 50.0
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 1.8e-20 103.2 149 44.3
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 2.4e-20 102.8 138 44.9
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 6.9e-20 101.3 136 41.2
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 1.5e-19 100.1 149 43.6
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 1.5e-19 100.1 145 46.9
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 3.8e-18 95.5 109 46.8
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 1.0e-15 87.4 117 40.2
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 1.3e-15 87.0 110 46.4
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 2.3e-15 86.3 127 40.2
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 3.9e-15 85.5 95 49.5
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 4.3e-14 82.0 110 37.3
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 4.3e-14 82.0 146 32.9
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 9.7e-14 80.9 113 42.5
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 1.1e-12 77.4 124 35.5
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 3.1e-12 75.9 103 37.9
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 2.0e-11 73.2 148 29.1
MBI11_g25049_MAGBIO Magnolia biondii HOM05D007267 ORTHO05D009053 5.5e-09 65.1 33 81.8
Nitab4.5_0000157g0140 Nicotiana tabacum HOM05D007267 ORTHO05D009053 5.5e-09 65.1 32 90.6
arahy.Tifrunner.gnm1.ann1.RKVJ8T Arachis hypogaea HOM05D007267 ORTHO05D009053 1.0e-07 60.8 53 66.0
Os07g0164200 Oryza sativa ssp. japonica HOM05D007267 ORTHO05D009053 2.3e-07 59.7 40 70.0
Lsat_1_v5_gn_6_53880 Lactuca sativa HOM05D007267 ORTHO05D009053 6.7e-07 58.2 59 50.8
Lsat_1_v5_gn_5_53160 Lactuca sativa HOM05D007267 ORTHO05D009053 8.8e-07 57.8 58 51.7
Gorai.006G118000 Gossypium raimondii HOM05D007267 ORTHO05D009053 7.4e-06 54.7 42 61.9


User provided reference genes

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