Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Q37N58 Arachis hypogaea HOM05D007735 ORTHO05D009638 7.8e-72 273.9 155 100.0
arahy.Tifrunner.gnm1.ann1.S9U9HD Arachis hypogaea HOM05D007735 ORTHO05D009638 7.8e-72 273.9 155 100.0
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 2.1e-37 159.5 150 64.7
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 2.8e-37 159.1 150 65.3
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 8.1e-37 157.5 150 62.7
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 1.8e-36 156.4 150 64.0
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 6.9e-36 154.5 150 62.7
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 1.4e-33 146.7 132 66.7
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 4.6e-32 141.7 153 60.1
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 3.0e-31 139.0 160 58.8
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 3.9e-31 138.7 152 64.5
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 8.7e-31 137.5 153 56.9
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 2.1e-29 132.9 148 58.1
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 5.3e-28 128.3 122 65.6
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 8.4e-26 120.9 114 63.2
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 7.9e-24 114.4 118 61.9
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 7.9e-24 114.4 120 61.7
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 7.9e-24 114.4 149 51.0
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 1.3e-23 113.6 127 58.3
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 3.0e-23 112.5 120 62.5
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 3.0e-23 112.5 121 60.3
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 7.4e-22 107.8 126 57.9
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 2.6e-19 99.4 101 60.4
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 9.7e-14 80.9 121 47.1
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 1.3e-13 80.5 149 49.7
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 4.8e-13 78.6 122 45.9
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 1.4e-12 77.0 115 47.0
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 2.6e-11 72.8 118 42.4
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 3.4e-11 72.4 115 45.2
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 7.7e-11 71.2 107 43.9
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 6.5e-10 68.2 119 40.3
arahy.Tifrunner.gnm1.ann1.KD7YUX Arachis hypogaea HOM05D007735 ORTHO05D009638 8.5e-10 67.8 111 54.1
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 8.5e-10 67.8 118 39.8
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 2.5e-09 66.2 118 39.0
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 5.5e-09 65.1 103 44.7
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 7.2e-09 64.7 114 41.2
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 9.4e-09 64.3 107 45.8
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 9.4e-09 64.3 104 42.3
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 1.2e-08 63.9 106 41.5
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 1.2e-08 63.9 106 41.5
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 1.2e-08 63.9 121 37.2
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 1.2e-08 63.9 152 40.1
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 1.6e-08 63.5 117 41.9
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 4.6e-08 62.0 104 40.4
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 7.9e-08 61.2 120 40.8
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 1.8e-07 60.1 117 47.0
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.8e-07 60.1 115 38.3
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 6.7e-07 58.2 108 42.6
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 1.5e-06 57.0 99 37.4
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 1.5e-06 57.0 99 37.4
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 1.5e-06 57.0 117 39.3
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 2.0e-06 56.6 103 39.8
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 2.5e-06 56.2 113 46.9
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 3.3e-06 55.8 119 37.8
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 7.4e-06 54.7 110 38.2
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 7.4e-06 54.7 116 38.8
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 9.7e-06 54.3 110 41.8
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 9.7e-06 54.3 118 39.8


User provided reference genes

Program Settings