Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 0.0e+00 1085.9 560 100.0
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 9.8e-234 813.5 489 88.1
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 5.8e-133 478.8 507 57.6
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 2.8e-127 459.9 502 56.6
TPR.G19527 Trifolium pratense HOM05D005512 ORTHO05D006716 5.8e-117 425.6 508 51.8
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 7.8e-106 388.7 480 51.0
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 1.5e-104 384.4 461 52.3
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 9.6e-104 381.7 531 48.2
Psat3g034880 Pisum sativum HOM05D005512 ORTHO05D006716 4.0e-102 376.3 467 50.5
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 4.8e-95 352.8 374 54.3
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 1.9e-72 277.7 512 38.7
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 1.3e-71 275.0 504 39.7
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 2.2e-71 274.2 507 39.8
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 2.6e-69 267.3 506 38.7
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 8.5e-68 262.3 503 38.4
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 5.5e-67 259.6 526 37.3
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 9.4e-67 258.8 504 37.9
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 1.6e-66 258.1 513 39.0
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 2.1e-66 257.7 509 38.1
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.7e-66 257.3 499 38.3
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 3.6e-66 256.9 503 37.0
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.4e-65 255.0 531 37.1
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 5.7e-64 249.6 510 37.5
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 1.3e-63 248.4 510 40.8
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 8.2e-63 245.7 519 37.0
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 6.9e-62 242.7 562 35.1
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 7.7e-61 239.2 555 35.1
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 1.0e-60 238.8 517 37.7
Ca_08983_v3 Cicer arietinum L. HOM05D005512 ORTHO05D006716 3.6e-58 230.3 411 40.4
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 1.8e-57 228.0 511 36.2
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 2.6e-56 224.2 407 39.3
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 4.4e-56 223.4 502 36.3
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 1.3e-55 221.9 499 36.1
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 6.3e-55 219.5 495 38.2
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.8e-54 218.0 498 35.7
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 3.5e-53 213.8 503 36.6
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 5.9e-53 213.0 513 36.6
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.0e-52 212.2 515 35.3
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 7.2e-51 206.1 377 38.7
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 8.0e-50 202.6 403 38.0
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 2.0e-45 188.0 401 37.4
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 1.5e-43 181.8 361 41.0
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 1.5e-43 181.8 484 34.3
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 1.9e-43 181.4 534 34.5
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 2.5e-43 181.0 397 36.5
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 1.6e-42 178.3 397 36.5
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 1.8e-41 174.9 512 33.2
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.5e-40 171.8 506 33.6
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 5.7e-40 169.9 391 35.3
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 4.8e-39 166.8 514 31.7
Eucgr.K02060 Eucalyptus grandis HOM05D005512 ORTHO05D006716 6.3e-39 166.4 330 36.7
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 1.8e-38 164.9 390 35.9
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 1.8e-38 164.9 501 32.3
Glyma.17G197300 Glycine max HOM05D005512 ORTHO05D006716 3.5e-37 160.6 142 56.3
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 1.7e-36 158.3 511 32.1
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 2.9e-36 157.5 485 32.0
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 5.0e-36 156.8 496 31.5
Glyma.19G084800 Glycine max HOM05D005512 ORTHO05D006716 1.1e-35 155.6 142 55.6
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 7.2e-35 152.9 363 33.3
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 7.2e-35 152.9 482 32.2
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 1.6e-34 151.8 501 29.9
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 8.0e-34 149.4 485 31.5
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 1.0e-33 149.1 502 31.5
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 1.4e-33 148.7 487 31.6
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 2.3e-33 147.9 547 29.3
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 8.8e-33 146.0 440 30.9
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 4.8e-31 140.2 498 30.1
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 4.8e-31 140.2 483 30.2
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 6.3e-31 139.8 492 30.5
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 1.1e-30 139.0 498 30.5
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 5.4e-30 136.7 496 31.0
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 7.7e-29 132.9 521 29.0
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 5.0e-28 130.2 389 31.9
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 8.6e-28 129.4 424 30.7
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 1.6e-26 125.2 488 30.1
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 8.0e-26 122.9 398 30.2
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 8.0e-26 122.9 398 30.2
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 1.4e-25 122.1 491 27.7
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 1.4e-25 122.1 478 30.3
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 2.3e-25 121.3 306 34.0
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 4.0e-25 120.6 473 28.1
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 2.0e-24 118.2 382 30.9
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 2.2e-23 114.8 422 29.4
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 8.3e-23 112.8 267 38.2
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 1.4e-22 112.1 365 32.6
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 3.1e-22 110.9 380 29.7
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 7.0e-22 109.8 381 28.9
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 7.8e-21 106.3 516 26.4
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 2.8e-18 97.8 394 30.2
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.8e-17 95.1 482 27.4
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 3.4e-16 90.9 377 27.3
SalBow3G2059 Salvia bowleyana HOM05D005512 ORTHO05D006716 5.8e-16 90.1 182 40.1
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 7.5e-16 89.7 494 28.1
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 2.2e-15 88.2 406 27.8
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 1.1e-14 85.9 219 32.4
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 2.4e-14 84.7 377 28.9
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 4.1e-14 84.0 191 35.6
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 5.4e-14 83.6 473 27.5
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 1.2e-13 82.4 219 31.1
ATR0820G165 Amborella trichopoda HOM05D005512 ORTHO05D006716 2.0e-13 81.6 351 27.1
PGSC0003DMG402008883 Solanum tuberosum HOM05D005512 ORTHO05D006716 1.0e-12 79.3 326 26.4
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.7e-12 78.6 470 26.6
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 2.8e-10 71.2 201 34.3
Eucgr.K02061 Eucalyptus grandis HOM05D005512 ORTHO05D006716 3.6e-10 70.9 184 37.5
Sc07g0005480 Simmondsia chinensis HOM05D005512 ORTHO05D006716 1.8e-09 68.6 54 66.7
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 8.9e-09 66.2 128 42.2
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 4.4e-08 63.9 221 33.0
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 2.9e-07 61.2 386 28.0
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 1.1e-06 59.3 83 50.6
Sopen10g032880 Solanum pennellii HOM05D005512 ORTHO05D006716 1.1e-06 59.3 174 31.0
Actinidia02438 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.9e-06 58.5 126 34.9
Solyc10g083380.2 Solanum lycopersicum HOM05D005512 ORTHO05D006716 9.2e-06 56.2 172 30.8


User provided reference genes

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