Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.S72ULK Arachis hypogaea HOM05D007827 ORTHO05D009749 6.0e-110 401.0 221 100.0
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea HOM05D007827 ORTHO05D009749 1.0e-101 373.6 221 94.6
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 1.6e-30 137.1 213 46.5
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 2.8e-30 136.3 216 44.4
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 8.0e-30 134.8 205 45.4
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 1.4e-29 134.0 231 43.3
Psat5g036160 Pisum sativum HOM05D007827 ORTHO05D009749 5.8e-28 128.6 225 40.9
VMungo1309G0458 Vigna mungo HOM05D007827 ORTHO05D009749 4.9e-27 125.6 190 48.4
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 6.4e-27 125.2 201 43.8
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 1.4e-26 124.0 220 44.1
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 4.1e-26 122.5 205 47.8
TPR.G3528 Trifolium pratense HOM05D007827 ORTHO05D009749 2.0e-25 120.2 254 45.3
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 3.5e-25 119.4 217 42.4
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 4.6e-25 119.0 200 43.0
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 4.3e-23 112.5 217 38.2
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 1.2e-22 110.9 212 37.3
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 2.1e-22 110.2 208 38.9
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 1.2e-20 104.4 197 37.1
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 1.5e-20 104.0 209 38.3
Glyma.14G097100 Glycine max HOM05D007827 ORTHO05D009749 2.0e-20 103.6 241 38.6
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 5.8e-20 102.1 206 36.9
Phvul.001G037300 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 7.5e-20 101.7 219 39.3
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 1.4e-18 97.4 196 34.7
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 1.6e-17 94.0 197 35.0
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 2.3e-16 90.1 200 41.0
VMungo0647G1789 Vigna mungo HOM05D007827 ORTHO05D009749 6.6e-16 88.6 235 35.3
arahy.Tifrunner.gnm1.ann1.EI9IQY Arachis hypogaea HOM05D007827 ORTHO05D009749 7.3e-15 85.1 199 36.7
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 9.5e-15 84.7 132 38.6
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 2.8e-14 83.2 140 35.7
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 3.6e-14 82.8 192 32.3
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 1.8e-13 80.5 225 32.0
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 2.3e-13 80.1 209 34.0
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 2.9e-11 73.2 210 31.4
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 8.4e-11 71.6 197 29.9
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 8.4e-11 71.6 219 32.0
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 1.4e-10 70.9 52 65.4
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 1.4e-10 70.9 199 32.2
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 1.9e-10 70.5 220 30.0
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 2.4e-10 70.1 224 29.5
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 2.4e-10 70.1 221 30.3
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 3.2e-10 69.7 219 31.5
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 4.1e-10 69.3 222 28.4
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 4.1e-10 69.3 72 50.0
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 7.1e-10 68.6 214 31.8
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.6e-09 67.4 207 30.9
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 6.0e-09 65.5 237 30.4
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 1.3e-08 64.3 61 54.1
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 1.3e-08 64.3 218 29.8
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.3e-08 64.3 203 30.5
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 3.9e-08 62.8 198 31.3
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 5.1e-08 62.4 47 59.6
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 5.1e-08 62.4 204 31.4
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 8.6e-08 61.6 199 28.6
Gohir.D05G042650 Gossypium hirsutum HOM05D007827 ORTHO05D009749 8.6e-08 61.6 196 30.6
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 1.1e-07 61.2 202 34.7
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.1e-07 61.2 215 30.2
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 1.5e-07 60.8 66 48.5
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 2.5e-07 60.1 48 52.1
FAN27G2967 Fragaria x ananassa HOM05D007827 ORTHO05D009749 3.3e-07 59.7 138 31.9
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 3.3e-07 59.7 50 54.0
Ciclev10010468m.g Citrus clementina HOM05D007827 ORTHO05D009749 1.2e-06 57.8 209 26.8
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.2e-06 57.8 205 30.2
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 1.6e-06 57.4 213 30.5
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 2.1e-06 57.0 119 35.3
Gohir.A05G040950 Gossypium hirsutum HOM05D007827 ORTHO05D009749 2.8e-06 56.6 192 28.1
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 2.8e-06 56.6 57 50.9
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 3.6e-06 56.2 54 46.3
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 6.2e-06 55.5 63 44.4
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 8.1e-06 55.1 53 43.4


User provided reference genes

Program Settings