Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PCZ0HW Arachis hypogaea HOM05D002468 ORTHO05D005371 3.9e-246 854.4 437 100.0
arahy.Tifrunner.gnm1.ann1.S6Z2J3 Arachis hypogaea HOM05D002468 ORTHO05D005371 3.9e-246 854.4 437 100.0
VMungo1383G1406 Vigna mungo HOM05D002468 ORTHO05D005371 1.2e-215 753.1 442 88.0
Phvul.008G003600 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 8.8e-214 746.9 445 87.2
Glyma.08G362900 Glycine max HOM05D002468 ORTHO05D005371 2.0e-213 745.7 441 87.8
Glyma.18G299100 Glycine max HOM05D002468 ORTHO05D005371 2.8e-212 741.9 441 87.5
Atru.chr12.1428 Acer truncatum HOM05D002468 ORTHO05D005371 1.0e-209 733.4 441 84.6
Lj1g0025256 Lotus japonicus HOM05D002468 ORTHO05D005371 6.6e-209 730.7 440 85.5
Thecc.02G191400 Theobroma cacao HOM05D002468 ORTHO05D005371 6.6e-209 730.7 441 84.8
Potri.001G068200 Populus trichocarpa HOM05D002468 ORTHO05D005371 8.6e-209 730.3 440 84.5
Prupe.1G214200 Prunus persica HOM05D002468 ORTHO05D005371 1.9e-208 729.2 440 85.0
Manes.08G100600 Manihot esculenta HOM05D002468 ORTHO05D005371 5.5e-208 727.6 441 83.0
MD16G1141700 Malus domestica HOM05D002468 ORTHO05D005371 7.2e-208 727.2 440 83.6
MD13G1131400 Malus domestica HOM05D002468 ORTHO05D005371 2.8e-207 725.3 440 83.9
Ca_04094_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 4.7e-207 724.5 442 85.1
Gohir.D04G140900 Gossypium hirsutum HOM05D002468 ORTHO05D005371 8.0e-207 723.8 440 84.8
Duzib132G1053 Durio zibethinus HOM05D002468 ORTHO05D005371 1.4e-206 723.0 441 84.1
Gorai.012G125900 Gossypium raimondii HOM05D002468 ORTHO05D005371 2.3e-206 722.2 440 84.5
Manes.09G188600 Manihot esculenta HOM05D002468 ORTHO05D005371 3.0e-206 721.8 441 82.5
Gohir.A04G101700 Gossypium hirsutum HOM05D002468 ORTHO05D005371 4.0e-206 721.5 440 84.8
TPR.G9718 Trifolium pratense HOM05D002468 ORTHO05D005371 4.0e-206 721.5 441 83.9
Medtr7g006560 Medicago truncatula HOM05D002468 ORTHO05D005371 8.9e-206 720.3 438 84.5
RcHm_v2.0_Chr4g0428801 Rosa chinensis HOM05D002468 ORTHO05D005371 1.2e-205 719.9 441 82.5
CANSAT01G0579 Cannabis sativa HOM05D002468 ORTHO05D005371 2.0e-205 719.2 440 82.7
CiPaw.06G109900 Carya illinoinensis HOM05D002468 ORTHO05D005371 9.8e-205 716.8 439 83.4
FvH4_4g22560 Fragaria vesca HOM05D002468 ORTHO05D005371 9.8e-205 716.8 442 82.8
QL03p049039 Quercus lobata HOM05D002468 ORTHO05D005371 1.3e-204 716.5 439 82.5
Sabra03G0117600 Salix brachista HOM05D002468 ORTHO05D005371 1.7e-204 716.1 436 83.7
GSVIVG01001098001 Vitis vinifera HOM05D002468 ORTHO05D005371 1.7e-204 716.1 443 82.6
Duzib052G0101 Durio zibethinus HOM05D002468 ORTHO05D005371 2.2e-204 715.7 441 82.5
FAN07G2580 Fragaria x ananassa HOM05D002468 ORTHO05D005371 2.2e-204 715.7 442 82.4
FAN12G2192 Fragaria x ananassa HOM05D002468 ORTHO05D005371 3.7e-204 714.9 436 82.1
PGR119G1329 Punica granatum HOM05D002468 ORTHO05D005371 1.1e-203 713.4 442 82.6
Cpa.g.sc38.67 Carica papaya HOM05D002468 ORTHO05D005371 2.4e-203 712.2 446 82.7
CiPaw.05G100700 Carya illinoinensis HOM05D002468 ORTHO05D005371 3.1e-203 711.8 439 82.5
Lalb_Chr04g0257301 Lupinus albus HOM05D002468 ORTHO05D005371 3.1e-203 711.8 439 84.5
FAN17G0051 Fragaria x ananassa HOM05D002468 ORTHO05D005371 2.0e-202 709.1 442 81.7
ClCG07G011940 Citrullus lanatus HOM05D002468 ORTHO05D005371 2.7e-202 708.8 440 82.5
Ciclev10004979m.g Citrus clementina HOM05D002468 ORTHO05D005371 3.5e-202 708.4 439 82.2
TWI18G0725 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 3.5e-202 708.4 447 83.0
CsaV3_4G002210 Cucumis sativus L. HOM05D002468 ORTHO05D005371 5.9e-202 707.6 440 82.3
Actinidia30583 Actinidia chinensis HOM05D002468 ORTHO05D005371 1.0e-201 706.8 440 82.0
Eucgr.G01978 Eucalyptus grandis HOM05D002468 ORTHO05D005371 2.3e-201 705.7 441 80.7
Psat3g207000 Pisum sativum HOM05D002468 ORTHO05D005371 2.3e-201 705.7 438 84.5
TAR629G1443 Trochodendron aralioides HOM05D002468 ORTHO05D005371 5.0e-201 704.5 439 81.8
THA.LOC104807252 Tarenaya hassleriana HOM05D002468 ORTHO05D005371 8.6e-201 703.7 440 81.1
Cfa009455 Carpinus fangiana HOM05D002468 ORTHO05D005371 1.1e-200 703.4 439 81.5
MELO3C017817.2 Cucumis melo HOM05D002468 ORTHO05D005371 3.3e-200 701.8 440 82.0
TWI36G1422 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 3.3e-200 701.8 445 82.7
Cc11_g14960 Coffea canephora HOM05D002468 ORTHO05D005371 5.6e-200 701.0 444 82.4
Sed0000476 Sechium edule HOM05D002468 ORTHO05D005371 9.5e-200 700.3 440 82.3
Oeu010257.1 Olea europaea HOM05D002468 ORTHO05D005371 1.6e-199 699.5 442 81.9
Dinv17539 Davidia involucrata HOM05D002468 ORTHO05D005371 2.8e-199 698.7 441 81.9
CAN.G624.1 Capsicum annuum HOM05D002468 ORTHO05D005371 3.6e-199 698.4 440 80.7
CSS0032961 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 6.1e-199 697.6 441 81.9
CSS0030444 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 8.0e-199 697.2 441 81.9
MSTRG.8058 Avicennia marina HOM05D002468 ORTHO05D005371 1.0e-198 696.8 443 81.5
Dinv03336 Davidia involucrata HOM05D002468 ORTHO05D005371 2.3e-198 695.7 440 81.6
HanXRQChr17g0540381 Helianthus annuus HOM05D002468 ORTHO05D005371 2.3e-198 695.7 437 81.0
Peaxi162Scf00842g00319 Petunia axillaris HOM05D002468 ORTHO05D005371 4.0e-198 694.9 442 80.3
MSTRG.449 Avicennia marina HOM05D002468 ORTHO05D005371 5.2e-198 694.5 442 80.8
Rhsim12G0017100 Rhododendron simsii HOM05D002468 ORTHO05D005371 8.9e-198 693.7 443 81.9
ECA246G0169 Erigeron canadensis HOM05D002468 ORTHO05D005371 2.0e-197 692.6 437 81.2
Sed0003563 Sechium edule HOM05D002468 ORTHO05D005371 4.9e-196 688.0 440 79.8
TAR371G0123 Trochodendron aralioides HOM05D002468 ORTHO05D005371 6.4e-196 687.6 418 83.7
EL10Ac6g13612 Beta vulgaris HOM05D002468 ORTHO05D005371 8.3e-196 687.2 438 79.9
SalBow2G0960 Salvia bowleyana HOM05D002468 ORTHO05D005371 1.9e-195 686.0 441 81.0
Hund14581 Selenicereus undatus HOM05D002468 ORTHO05D005371 3.2e-195 685.3 444 79.1
vmacro01017 Vaccinium macrocarpon HOM05D002468 ORTHO05D005371 3.2e-195 685.3 441 80.7
Solyc11g033288.1 Solanum lycopersicum HOM05D002468 ORTHO05D005371 1.2e-194 683.3 438 80.4
Lsat_1_v5_gn_3_32661 Lactuca sativa HOM05D002468 ORTHO05D005371 1.6e-194 682.9 441 79.8
Sopen11g017140 Solanum pennellii HOM05D002468 ORTHO05D005371 2.7e-194 682.2 440 80.2
BraA10t44546Z Brassica rapa HOM05D002468 ORTHO05D005371 6.0e-194 681.0 438 79.9
Sc11g0000080 Simmondsia chinensis HOM05D002468 ORTHO05D005371 6.0e-194 681.0 442 78.7
PGSC0003DMG402028027 Solanum tuberosum HOM05D002468 ORTHO05D005371 6.0e-194 681.0 442 79.9
Thhalv10013572m.g Eutrema salsugineum HOM05D002468 ORTHO05D005371 1.3e-193 679.9 438 78.8
PSO017G4233 Papaver somniferum HOM05D002468 ORTHO05D005371 1.3e-193 679.9 438 79.2
Aqoxy5G03074 Aquilegia oxysepala HOM05D002468 ORTHO05D005371 6.6e-193 677.6 439 78.4
A10p24820 Brassica napus HOM05D002468 ORTHO05D005371 8.6e-193 677.2 439 79.3
C09p63670 Brassica napus HOM05D002468 ORTHO05D005371 8.6e-193 677.2 442 79.2
BolC9t59208H Brassica oleracea HOM05D002468 ORTHO05D005371 8.6e-193 677.2 442 79.2
C02p06130 Brassica napus HOM05D002468 ORTHO05D005371 1.9e-192 676.0 439 79.0
BolC2t06554H Brassica oleracea HOM05D002468 ORTHO05D005371 1.9e-192 676.0 439 79.0
AUR62028839 Chenopodium quinoa HOM05D002468 ORTHO05D005371 1.9e-192 676.0 404 83.2
Ah.03g135540 Amaranthus hybridus HOM05D002468 ORTHO05D005371 4.3e-192 674.9 443 78.1
AUR62005716 Chenopodium quinoa HOM05D002468 ORTHO05D005371 4.3e-192 674.9 404 82.9
HanXRQChr06g0175161 Helianthus annuus HOM05D002468 ORTHO05D005371 1.2e-191 673.3 436 79.4
AL6G24040 Arabidopsis lyrata HOM05D002468 ORTHO05D005371 1.6e-191 672.9 436 78.7
DCAR_024636 Daucus carota HOM05D002468 ORTHO05D005371 4.7e-191 671.4 439 78.8
PSO478G3355 Papaver somniferum HOM05D002468 ORTHO05D005371 1.1e-190 670.2 439 78.8
AT5G13420 Arabidopsis thaliana HOM05D002468 ORTHO05D005371 1.4e-190 669.8 438 78.8
BraA03t09933Z Brassica rapa HOM05D002468 ORTHO05D005371 1.4e-190 669.8 437 79.4
Sp6g30600 Schrenkiella parvula HOM05D002468 ORTHO05D005371 2.3e-190 669.1 399 84.0
BcaC04g19118 Brassica carinata HOM05D002468 ORTHO05D005371 3.1e-190 668.7 439 78.1
A03p05960 Brassica napus HOM05D002468 ORTHO05D005371 4.0e-190 668.3 437 78.9
C03p07000 Brassica napus HOM05D002468 ORTHO05D005371 2.0e-189 666.0 437 78.7
BolC3t13199H Brassica oleracea HOM05D002468 ORTHO05D005371 2.0e-189 666.0 437 78.7
MBI07_g35982_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 2.0e-189 666.0 439 79.0
Carub.0006s1158 Capsella rubella HOM05D002468 ORTHO05D005371 2.6e-189 665.6 440 77.5
unitig_8.g2893 Utricularia gibba HOM05D002468 ORTHO05D005371 3.4e-189 665.2 376 87.8
Haze_12509 Corylus avellana HOM05D002468 ORTHO05D005371 1.7e-188 662.9 413 81.4
CARHR200010 Cardamine hirsuta HOM05D002468 ORTHO05D005371 8.3e-188 660.6 439 77.2
Os01g0926300 Oryza sativa ssp. japonica HOM05D002468 ORTHO05D005371 8.3e-188 660.6 433 78.8
A02p01910 Brassica napus HOM05D002468 ORTHO05D005371 1.4e-187 659.8 411 80.3
BraA02t05164Z Brassica rapa HOM05D002468 ORTHO05D005371 1.4e-187 659.8 411 80.3
Zm00001eb363880 Zea mays HOM05D002468 ORTHO05D005371 1.0e-185 653.7 434 76.7
Migut.K01049 Erythranthe guttata HOM05D002468 ORTHO05D005371 1.3e-185 653.3 442 77.4
SGA_v2.0_scaffold258G45768 Striga asiatica HOM05D002468 ORTHO05D005371 3.0e-185 652.1 446 78.3
HPP92_009801 Vanilla planifolia HOM05D002468 ORTHO05D005371 7.3e-184 647.5 421 78.6
Zm00001eb142730 Zea mays HOM05D002468 ORTHO05D005371 4.7e-183 644.8 437 76.4
CSS0032033 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 1.1e-182 643.7 390 84.1
HanXRQChr06g0175171 Helianthus annuus HOM05D002468 ORTHO05D005371 1.4e-182 643.3 384 83.1
MBI07_g48060_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 1.5e-181 639.8 481 72.3
ATR0582G307 Amborella trichopoda HOM05D002468 ORTHO05D005371 1.7e-180 636.3 379 83.9
Aa31LG3G14290 Aethionema arabicum HOM05D002468 ORTHO05D005371 6.4e-180 634.4 489 68.9
CDE05G3080 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 9.2e-179 630.6 394 79.2
CDE05G2158 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 2.1e-178 629.4 425 75.1
Nitab4.5_0004349g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 3.3e-176 622.1 440 74.8
Actinidia22113 Actinidia chinensis HOM05D002468 ORTHO05D005371 1.8e-174 616.3 380 82.6
BcaB01g05361 Brassica carinata HOM05D002468 ORTHO05D005371 1.8e-174 616.3 437 74.4
Nitab4.5_0002569g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 4.3e-168 595.1 442 72.2
Potri.003G161900 Populus trichocarpa HOM05D002468 ORTHO05D005371 2.1e-167 592.8 363 83.7
BcaNung01156 Brassica carinata HOM05D002468 ORTHO05D005371 2.1e-162 576.2 392 77.8
Lalb_Chr10g0091121 Lupinus albus HOM05D002468 ORTHO05D005371 1.9e-160 569.7 359 82.5
Lj4g0027400 Lotus japonicus HOM05D002468 ORTHO05D005371 2.7e-154 549.3 372 72.8
AagrBONN_evm.TU.Sc2ySwM_228.2334 Anthoceros agrestis HOM05D002468 ORTHO05D005371 4.3e-152 542.0 399 68.7
Lalb_Chr13g0296941 Lupinus albus HOM05D002468 ORTHO05D005371 1.8e-150 536.6 371 69.8
Lj6C840T10 Lonicera japonica HOM05D002468 ORTHO05D005371 6.9e-150 534.6 305 87.5
Glyma.05G199800 Glycine max HOM05D002468 ORTHO05D005371 5.8e-149 531.6 365 70.4
Ca_16823_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 2.1e-146 523.1 381 68.0
Medtr8g096130 Medicago truncatula HOM05D002468 ORTHO05D005371 7.9e-146 521.2 399 66.2
Mapoly0092s0071 Marchantia polymorpha HOM05D002468 ORTHO05D005371 1.1e-144 517.3 420 63.8
Mapoly0092s0073 Marchantia polymorpha HOM05D002468 ORTHO05D005371 1.9e-144 516.5 432 62.3
Phvul.002G281000 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 1.9e-144 516.5 379 67.3
Mapoly0092s0072 Marchantia polymorpha HOM05D002468 ORTHO05D005371 4.3e-144 515.4 432 62.0
TPR.G12900 Trifolium pratense HOM05D002468 ORTHO05D005371 8.2e-143 511.1 389 66.6
SMO367G1271 Selaginella moellendorffii HOM05D002468 ORTHO05D005371 6.9e-142 508.1 363 70.8
VMungo0251G2964 Vigna mungo HOM05D002468 ORTHO05D001247 1.2e-141 507.3 364 67.3
Pp3c26_4790 Physcomitrium patens HOM05D002468 ORTHO05D005371 7.1e-139 498.0 392 65.1
ClCG06G013000 Citrullus lanatus HOM05D002468 ORTHO05D005371 3.7e-135 485.7 377 62.3
MELO3C017506.2 Cucumis melo HOM05D002468 ORTHO05D005371 5.0e-132 475.3 377 62.1
SHI04110 Sapria himalayana HOM05D002468 ORTHO05D005371 8.5e-132 474.6 317 76.3
Cpa.g.sc2215.1 Carica papaya HOM05D002468 ORTHO05D005371 1.0e-129 467.6 359 63.0
CBR_g51451 Chara braunii HOM05D002468 ORTHO05D005371 2.9e-116 422.9 368 59.5
arahy.Tifrunner.gnm1.ann1.93S04R Arachis hypogaea HOM05D002468 ORTHO05D005371 1.6e-101 374.0 366 56.3
Eucgr.H00650 Eucalyptus grandis HOM05D002468 ORTHO05D005371 5.4e-94 349.0 302 61.3
Lj2g0022028 Lotus japonicus HOM05D002468 ORTHO05D005371 1.9e-83 313.9 226 71.2
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 3.7e-71 273.1 187 78.1
Mapoly0189s0003 Marchantia polymorpha HOM05D002468 ORTHO05D005371 1.2e-69 268.1 328 45.4
arahy.Tifrunner.gnm1.ann1.1XR5VC Arachis hypogaea HOM05D002468 ORTHO05D005371 2.1e-61 240.7 199 62.8
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 2.1e-61 240.7 139 88.5
HanXRQChr10g0304361 Helianthus annuus HOM05D002468 ORTHO05D005371 5.1e-60 236.1 123 89.4
Glyma.15G205533 Glycine max HOM05D002468 ORTHO05D005371 2.0e-56 224.2 160 70.0
CsaV3_1G031170 Cucumis sativus L. HOM05D002468 ORTHO05D005371 1.8e-41 174.5 162 54.9
Glyma.08G007300 Glycine max HOM05D002468 ORTHO05D005371 9.0e-41 172.2 119 73.9
BcaB01g05316 Brassica carinata HOM05D000877 ORTHO05D012137 1.3e-36 158.3 111 76.6
BolC3t13237H Brassica oleracea HOM05D000877 ORTHO05D012137 1.8e-33 147.9 81 90.1
Lalb_Chr10g0091111 Lupinus albus HOM05D002468 ORTHO05D005371 9.0e-33 145.6 80 88.8
SGA_v2.0_scaffold4G02418 Striga asiatica HOM05D002468 ORTHO05D051394 6.0e-29 132.9 112 58.9
CsaV3_1G031160 Cucumis sativus L. HOM05D002468 ORTHO05D005371 1.3e-26 125.2 80 71.2
SEGI_31132 Sequoiadendron giganteum HOM05D002468 ORTHO05D005371 1.5e-19 101.7 140 43.6
SGA_v2.0_scaffold528G52739 Striga asiatica HOM05D002468 ORTHO05D051394 4.8e-18 96.7 51 84.3
Pp3c3_15390 Physcomitrium patens HOM05D002468 ORTHO05D005371 1.4e-14 85.1 94 50.0
vmacro08874 Vaccinium macrocarpon HOM05D002468 ORTHO05D013153 4.5e-08 63.5 35 85.7


User provided reference genes

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