Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.S2P6Y8 Arachis hypogaea HOM05D001739 ORTHO05D004575 1.0e-160 570.1 302 100.0
arahy.Tifrunner.gnm1.ann1.9HZQ4R Arachis hypogaea HOM05D001739 ORTHO05D004575 1.2e-113 413.7 295 80.0
arahy.Tifrunner.gnm1.ann1.SDZ4E8 Arachis hypogaea HOM05D001739 ORTHO05D004575 3.0e-112 409.1 295 79.7
arahy.Tifrunner.gnm1.ann1.WW7XLJ Arachis hypogaea HOM05D001739 ORTHO05D004575 8.2e-102 374.4 295 74.6
arahy.Tifrunner.gnm1.ann1.7457H2 Arachis hypogaea HOM05D001739 ORTHO05D004575 2.0e-100 369.8 295 74.2
Lj4g0016027 Lotus japonicus HOM05D001739 ORTHO05D004575 7.5e-87 324.7 300 65.3
arahy.Tifrunner.gnm1.ann1.704H70 Arachis hypogaea HOM05D001739 ORTHO05D004575 5.4e-85 318.5 178 95.5
Glyma.13G112900 Glycine max HOM05D001739 ORTHO05D004575 1.6e-84 317.0 296 65.5
Psat6g134600 Pisum sativum HOM05D001739 ORTHO05D004575 2.7e-84 316.2 304 63.5
Glyma.17G046900 Glycine max HOM05D001739 ORTHO05D004575 1.1e-82 310.8 296 64.2
Medtr1g072890 Medicago truncatula HOM05D001739 ORTHO05D004575 8.0e-81 304.7 304 63.2
VMungo1215G0229 Vigna mungo HOM05D001739 ORTHO05D004575 5.2e-80 302.0 296 62.2
Phvul.003G128600 Phaseolus vulgaris HOM05D001739 ORTHO05D004575 6.8e-80 301.6 294 61.9
Ca_09790_v3 Cicer arietinum L. HOM05D001739 ORTHO05D004575 1.2e-79 300.8 300 62.0
Medtr1g072970 Medicago truncatula HOM05D001739 ORTHO05D004575 4.6e-76 288.9 306 59.8
Lalb_Chr12g0200311 Lupinus albus HOM05D001739 ORTHO05D004575 1.3e-75 287.3 299 59.5
TPR.G18558 Trifolium pratense HOM05D001739 ORTHO05D004575 2.9e-75 286.2 297 60.9
MD15G1221900 Malus domestica HOM05D001739 ORTHO05D004575 2.9e-70 269.6 297 57.6
TPR.G34376 Trifolium pratense HOM05D001739 ORTHO05D004575 3.7e-70 269.2 294 57.8
MD02G1099100 Malus domestica HOM05D001739 ORTHO05D004575 1.4e-69 267.3 299 56.9
TAR383G0739 Trochodendron aralioides HOM05D001739 ORTHO05D004575 2.7e-68 263.1 305 57.7
Rhsim05G0003800 Rhododendron simsii HOM05D001739 ORTHO05D004575 6.6e-67 258.5 307 55.0
Eucgr.C00777 Eucalyptus grandis HOM05D001739 ORTHO05D004575 2.5e-66 256.5 302 54.3
FAN23G1590 Fragaria x ananassa HOM05D001739 ORTHO05D004575 4.3e-66 255.8 302 54.6
Dinv25554 Davidia involucrata HOM05D001739 ORTHO05D004575 9.5e-66 254.6 298 53.7
Prupe.6G204300 Prunus persica HOM05D001739 ORTHO05D004575 9.5e-66 254.6 300 54.0
Haze_26051 Corylus avellana HOM05D001739 ORTHO05D004575 1.2e-65 254.2 302 56.0
Potri.006G137900 Populus trichocarpa HOM05D001739 ORTHO05D004575 1.2e-65 254.2 303 56.4
Prupe.7G193800 Prunus persica HOM05D001739 ORTHO05D004575 1.2e-65 254.2 299 55.2
Sabra18G0055900 Salix brachista HOM05D001739 ORTHO05D004575 1.2e-65 254.2 305 53.1
CiPaw.03G202600 Carya illinoinensis HOM05D001739 ORTHO05D004575 1.6e-65 253.8 301 56.5
DCAR_005064 Daucus carota HOM05D001739 ORTHO05D004575 2.1e-65 253.4 300 55.0
THA.LOC104809049 Tarenaya hassleriana HOM05D001739 ORTHO05D004575 2.1e-65 253.4 296 55.4
GSVIVG01023097001 Vitis vinifera HOM05D001739 ORTHO05D004575 2.8e-65 253.1 303 55.4
Psat7g002920 Pisum sativum HOM05D001739 ORTHO05D004575 4.7e-65 252.3 279 57.7
CANSAT56G3462 Cannabis sativa HOM05D001739 ORTHO05D004575 6.2e-65 251.9 304 54.6
Hma1.2p1_0169F.1_g074380 Hydrangea macrophylla HOM05D001739 ORTHO05D004575 6.2e-65 251.9 307 55.7
Cfa002954 Carpinus fangiana HOM05D001739 ORTHO05D004575 1.4e-64 250.8 302 56.0
DCAR_003861 Daucus carota HOM05D001739 ORTHO05D004575 4.0e-64 249.2 299 55.2
Solyc07g042380.4 Solanum lycopersicum HOM05D001739 ORTHO05D004575 4.0e-64 249.2 299 54.2
Nitab4.5_0001565g0110 Nicotiana tabacum HOM05D001739 ORTHO05D004575 1.2e-63 247.7 304 54.3
Gohir.A07G016500 Gossypium hirsutum HOM05D001739 ORTHO05D004575 2.0e-63 246.9 300 55.3
Cc06_g12580 Coffea canephora HOM05D001739 ORTHO05D004575 5.8e-63 245.4 301 52.5
Sopen07g021980 Solanum pennellii HOM05D001739 ORTHO05D004575 5.8e-63 245.4 303 53.1
Prupe.6G204500 Prunus persica HOM05D001739 ORTHO05D004575 7.5e-63 245.0 278 54.7
Peaxi162Scf00191g01112 Petunia axillaris HOM05D001739 ORTHO05D004575 1.7e-62 243.8 303 53.5
RcHm_v2.0_Chr2g0095731 Rosa chinensis HOM05D001739 ORTHO05D004575 2.9e-62 243.0 305 52.1
Duzib168G0208 Durio zibethinus HOM05D001739 ORTHO05D004575 3.7e-62 242.7 300 54.3
QL11p002157 Quercus lobata HOM05D001739 ORTHO05D004575 8.3e-62 241.5 302 54.0
SGA_v2.0_scaffold281G46906 Striga asiatica HOM05D001739 ORTHO05D004575 1.1e-61 241.1 297 54.5
CAN.G63.12 Capsicum annuum HOM05D001739 ORTHO05D004575 1.4e-61 240.7 299 53.5
Atru.chr7.1751 Acer truncatum HOM05D001739 ORTHO05D004575 2.4e-61 240.0 302 54.0
Cpa.g.sc32.6 Carica papaya HOM05D001739 ORTHO05D004575 4.1e-61 239.2 298 54.7
Manes.16G091500 Manihot esculenta HOM05D001739 ORTHO05D004575 4.1e-61 239.2 306 52.9
FvH4_1g09210 Fragaria vesca HOM05D001739 ORTHO05D004575 7.8e-60 235.0 303 51.8
vmacro17113 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 7.8e-60 235.0 307 53.1
FAN19G0975 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.3e-59 234.2 303 51.8
FAN26G1120 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.3e-59 234.2 303 51.8
Lj7C690T11 Lonicera japonica HOM05D001739 ORTHO05D004575 1.3e-59 234.2 298 53.4
vmacro17096 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 1.3e-59 234.2 310 51.6
vmacro17095 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 1.7e-59 233.8 302 52.6
FAN26G0091 Fragaria x ananassa HOM05D001739 ORTHO05D004575 2.3e-59 233.4 303 51.5
FAN28G0236 Fragaria x ananassa HOM05D001739 ORTHO05D004575 2.3e-59 233.4 303 51.8
FAN28G1182 Fragaria x ananassa HOM05D001739 ORTHO05D004575 2.3e-59 233.4 303 51.8
Nn8g40294 Nelumbo nucifera HOM05D001739 ORTHO05D004575 6.6e-59 231.9 303 51.2
vmacro23084 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 6.6e-59 231.9 302 52.0
CsaV3_1G041350 Cucumis sativus L. HOM05D001739 ORTHO05D004575 8.6e-59 231.5 311 52.7
BcaB01g03896 Brassica carinata HOM05D001739 ORTHO05D004575 1.5e-58 230.7 298 53.0
MELO3C015548.2 Cucumis melo HOM05D001739 ORTHO05D004575 1.5e-58 230.7 311 51.8
MSTRG.5982 Avicennia marina HOM05D001739 ORTHO05D004575 1.9e-58 230.3 313 52.1
Sed0021617 Sechium edule HOM05D001739 ORTHO05D004575 2.5e-58 229.9 305 50.8
C03p22320 Brassica napus HOM05D001739 ORTHO05D004575 4.3e-58 229.2 299 52.2
ClCG03G014800 Citrullus lanatus HOM05D001739 ORTHO05D004575 4.3e-58 229.2 310 51.9
TWI32G0648 Tripterygium wilfordii HOM05D001739 ORTHO05D004575 4.3e-58 229.2 294 54.4
Nitab4.5_0007773g0020 Nicotiana tabacum HOM05D001739 ORTHO05D004575 9.5e-58 228.0 274 55.5
A03p19100 Brassica napus HOM05D001739 ORTHO05D004575 1.2e-57 227.6 299 51.8
BcaC01g05798 Brassica carinata HOM05D001739 ORTHO05D004575 1.6e-57 227.3 299 51.8
BolC3t14614H Brassica oleracea HOM05D001739 ORTHO05D004575 1.6e-57 227.3 299 51.8
BraA03t11167Z Brassica rapa HOM05D001739 ORTHO05D004575 1.6e-57 227.3 299 51.8
Thhalv10016153m.g Eutrema salsugineum HOM05D001739 ORTHO05D004575 2.1e-57 226.9 299 52.8
AUR62025277 Chenopodium quinoa HOM05D001739 ORTHO05D004575 2.8e-57 226.5 260 58.1
Lsat_1_v5_gn_7_35381 Lactuca sativa HOM05D001739 ORTHO05D004575 6.2e-57 225.3 298 53.7
Sc18g0003470 Simmondsia chinensis HOM05D001739 ORTHO05D004575 8.1e-57 224.9 303 50.2
BolC4t23047H Brassica oleracea HOM05D001739 ORTHO05D004575 1.1e-56 224.6 291 52.9
C04p14660 Brassica napus HOM05D001739 ORTHO05D004575 3.1e-56 223.0 291 52.9
AT2G34357 Arabidopsis thaliana HOM05D001739 ORTHO05D004575 4.0e-56 222.6 299 52.5
BcaB02g09558 Brassica carinata HOM05D001739 ORTHO05D004575 4.0e-56 222.6 292 53.1
A05p11320 Brassica napus HOM05D001739 ORTHO05D004575 4.0e-56 222.6 291 52.6
PGR142G3865 Punica granatum HOM05D001739 ORTHO05D004575 5.2e-56 222.2 314 48.1
Sed0004150 Sechium edule HOM05D001739 ORTHO05D004575 6.8e-56 221.9 306 52.3
CARHR128440 Cardamine hirsuta HOM05D001739 ORTHO05D004575 8.9e-56 221.5 302 50.7
ECA240G3214 Erigeron canadensis HOM05D001739 ORTHO05D004575 8.9e-56 221.5 295 52.2
Aa31LG9G14080 Aethionema arabicum HOM05D001739 ORTHO05D004575 1.2e-55 221.1 294 50.3
COL.COLO4_21223 Corchorus olitorius HOM05D001739 ORTHO05D004575 3.4e-55 219.5 306 50.7
Ah.09g229240 Amaranthus hybridus HOM05D001739 ORTHO05D004575 1.7e-54 217.2 299 51.5
PSO104G0064 Papaver somniferum HOM05D001739 ORTHO05D004575 1.7e-54 217.2 284 50.0
Thecc.09G071800 Theobroma cacao HOM05D001739 ORTHO05D004575 2.9e-54 216.5 302 51.3
AL4G30320 Arabidopsis lyrata HOM05D001739 ORTHO05D004575 3.7e-54 216.1 302 51.0
PSO421G0331 Papaver somniferum HOM05D001739 ORTHO05D004575 4.9e-54 215.7 300 49.3
Sc24g0001530 Simmondsia chinensis HOM05D001739 ORTHO05D004575 4.9e-54 215.7 303 49.8
Carub.0004s1602 Capsella rubella HOM05D001739 ORTHO05D004575 1.9e-53 213.8 300 51.7
CSS0017458 Camellia sinensis var. sinensis HOM05D001739 ORTHO05D004575 2.4e-53 213.4 300 50.3
Hund23253 Selenicereus undatus HOM05D001739 ORTHO05D004575 1.2e-52 211.1 301 50.8
EL10Ac8g19018 Beta vulgaris HOM05D001739 ORTHO05D004575 2.1e-52 210.3 300 51.0
Gohir.D07G016300 Gossypium hirsutum HOM05D001739 ORTHO05D004575 2.7e-52 209.9 300 50.3
Aqoxy7G03292 Aquilegia oxysepala HOM05D001739 ORTHO05D004575 3.5e-52 209.5 300 50.3
Gorai.001G017100 Gossypium raimondii HOM05D001739 ORTHO05D004575 1.0e-51 208.0 302 49.7
Sp4g16630 Schrenkiella parvula HOM05D001739 ORTHO05D004575 1.3e-51 207.6 295 50.2
Ciclev10023308m.g Citrus clementina HOM05D001739 ORTHO05D004575 2.3e-51 206.8 298 46.6
vmacro23083 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 1.5e-50 204.1 281 50.2
unitig_744.g24652 Utricularia gibba HOM05D001739 ORTHO05D004575 5.6e-50 202.2 288 49.7
AUR62028281 Chenopodium quinoa HOM05D001739 ORTHO05D004575 2.4e-48 196.8 268 53.0
AUR62019633 Chenopodium quinoa HOM05D001739 ORTHO05D004575 4.4e-47 192.6 271 50.9
Migut.J00896 Erythranthe guttata HOM05D001739 ORTHO05D004575 5.8e-47 192.2 315 46.7
AUR62039592 Chenopodium quinoa HOM05D001739 ORTHO05D004575 1.7e-46 190.7 265 52.1
HanXRQChr09g0273551 Helianthus annuus HOM05D001739 ORTHO05D004575 1.4e-45 187.6 286 49.3
C04p13350 Brassica napus HOM05D001739 ORTHO05D004575 7.1e-45 185.3 274 50.7
BcaC02g11606 Brassica carinata HOM05D001739 ORTHO05D004575 1.2e-44 184.5 288 47.9
BcaC02g11500 Brassica carinata HOM05D001739 ORTHO05D004575 3.5e-44 183.0 290 46.6
ATR0681G226 Amborella trichopoda HOM05D001739 ORTHO05D004575 1.9e-42 177.2 316 43.7
HanXRQChr04g0122381 Helianthus annuus HOM05D001739 ORTHO05D004575 1.9e-42 177.2 250 49.2
HPP92_004359 Vanilla planifolia HOM05D001739 ORTHO05D004575 2.5e-42 176.8 290 45.2
Zm00001eb257110 Zea mays HOM05D001739 ORTHO05D004575 6.2e-41 172.2 291 45.0
Os02g0782100 Oryza sativa ssp. japonica HOM05D001739 ORTHO05D004575 3.1e-40 169.9 288 43.8
CDE04G0230 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 3.4e-39 166.4 308 44.5
SEGI_25708 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 5.6e-34 149.1 297 41.1
CAN.G333.13 Capsicum annuum HOM05D001739 ORTHO05D004575 9.6e-34 148.3 324 36.4
Dinv30816 Davidia involucrata HOM05D001739 ORTHO05D004575 6.2e-33 145.6 263 45.6
ATR0681G387 Amborella trichopoda HOM05D001739 ORTHO05D004575 1.2e-31 141.4 282 39.0
Oeu055335.1 Olea europaea HOM05D001739 ORTHO05D004575 6.4e-30 135.6 181 50.3
Pp3c2_3190 Physcomitrium patens HOM05D001739 ORTHO05D004575 1.3e-25 121.3 320 35.6
SMO361G0459 Selaginella moellendorffii HOM05D001739 ORTHO05D004575 4.8e-25 119.4 302 36.1
CDE12G0121 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 6.2e-25 119.0 252 36.9
SHI02769 Sapria himalayana HOM05D001739 ORTHO05D004575 8.1e-25 118.6 217 41.5
BraA05t20081Z Brassica rapa HOM05D001739 ORTHO05D004575 2.9e-22 110.2 150 52.0
Lalb_Chr13g0299281 Lupinus albus HOM05D001739 ORTHO05D004575 1.1e-18 98.2 98 60.2
Dinv25520 Davidia involucrata HOM05D001739 ORTHO05D004575 6.9e-16 89.0 120 48.3
Mapoly0061s0020 Marchantia polymorpha HOM05D001739 ORTHO05D004575 6.9e-16 89.0 326 31.3
Prupe.7G186700 Prunus persica HOM05D001739 ORTHO05D004575 2.1e-12 77.4 61 70.5
CBR_g11184 Chara braunii HOM05D001739 ORTHO05D004575 1.1e-10 71.6 173 34.7
vmacro17115 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 3.3e-10 70.1 53 69.8
Lsat_1_v5_gn_5_144761 Lactuca sativa HOM05D000129 ORTHO05D000144 1.0e-06 58.5 37 75.7
MD02G1098800 Malus domestica HOM05D001739 ORTHO05D004575 2.9e-06 57.0 106 41.5
Psat1g114160 Pisum sativum HOM05D001129 ORTHO05D001404 3.8e-06 56.6 45 62.2


User provided reference genes

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