Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.3e-143 513.1 258 100.0
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 8.3e-95 350.9 241 78.8
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 3.7e-87 325.5 286 65.7
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 5.6e-83 311.6 286 65.0
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 7.3e-83 311.2 281 62.6
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 1.2e-82 310.5 282 64.2
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 8.4e-79 297.7 285 61.4
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 4.2e-78 295.4 264 64.0
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 4.6e-77 292.0 283 60.4
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 6.0e-77 291.6 282 59.6
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 6.0e-77 291.6 284 61.3
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 1.3e-76 290.4 282 60.6
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 3.9e-76 288.9 282 58.9
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 9.6e-75 284.3 281 59.1
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.6e-74 283.5 282 58.9
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 2.8e-74 282.7 281 59.4
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 3.6e-74 282.3 281 58.7
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 6.2e-74 281.6 281 58.7
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 1.8e-73 280.0 281 58.4
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 1.8e-73 280.0 281 56.9
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 2.4e-73 279.6 282 58.9
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 2.4e-73 279.6 280 57.1
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 5.3e-73 278.5 281 56.2
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 2.6e-72 276.2 282 57.8
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.4e-72 275.8 285 56.1
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 4.4e-72 275.4 285 55.4
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 5.8e-72 275.0 281 57.3
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 7.6e-72 274.6 283 56.9
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 1.3e-71 273.9 283 56.9
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.3e-71 273.9 282 56.7
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 1.7e-71 273.5 287 55.4
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 6.4e-71 271.6 281 54.8
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 6.4e-71 271.6 284 57.4
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 8.4e-71 271.2 281 55.5
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 1.4e-70 270.4 284 57.0
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 1.4e-70 270.4 283 55.1
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 3.2e-70 269.2 281 55.9
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 5.4e-70 268.5 288 53.8
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 5.4e-70 268.5 282 54.6
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 7.1e-70 268.1 285 56.1
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 9.3e-70 267.7 281 56.2
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 1.2e-69 267.3 285 54.0
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 2.1e-69 266.5 281 54.4
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 3.5e-69 265.8 281 56.9
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 3.5e-69 265.8 281 55.5
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 3.5e-69 265.8 281 54.4
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 6.0e-69 265.0 272 57.0
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 6.0e-69 265.0 305 52.1
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 6.0e-69 265.0 283 54.8
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 1.7e-68 263.5 268 59.3
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 2.3e-68 263.1 281 54.4
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 3.0e-68 262.7 282 56.7
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 5.1e-68 261.9 239 60.7
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 8.7e-68 261.2 283 56.2
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 8.7e-68 261.2 283 53.7
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.5e-67 260.4 288 53.1
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 1.9e-67 260.0 284 56.3
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 1.3e-66 257.3 167 74.9
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 4.8e-66 255.4 287 52.6
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 4.8e-66 255.4 287 52.6
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 6.2e-66 255.0 283 53.4
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 8.1e-66 254.6 167 75.4
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 8.1e-66 254.6 273 53.5
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 8.1e-66 254.6 284 51.8
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 1.1e-65 254.2 286 53.5
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 1.1e-65 254.2 286 53.8
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 1.4e-65 253.8 283 53.0
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 1.4e-65 253.8 237 59.5
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 3.1e-65 252.7 167 76.0
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 3.1e-65 252.7 313 51.8
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 5.3e-65 251.9 277 54.2
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 1.2e-64 250.8 167 73.1
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 1.5e-64 250.4 168 76.2
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 2.0e-64 250.0 167 72.5
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 2.0e-64 250.0 167 72.5
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.6e-64 249.6 167 73.1
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.6e-64 249.6 167 73.1
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.6e-64 249.6 167 73.1
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 3.4e-64 249.2 305 50.5
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 4.5e-64 248.8 285 52.3
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 9.9e-64 247.7 167 74.9
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 1.7e-63 246.9 278 50.7
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 2.2e-63 246.5 284 53.2
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 2.2e-63 246.5 225 58.2
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 2.9e-63 246.1 272 51.8
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 4.9e-63 245.4 167 71.9
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 4.9e-63 245.4 167 72.5
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 4.9e-63 245.4 175 72.0
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 6.4e-63 245.0 285 54.0
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 6.4e-63 245.0 272 50.7
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 1.1e-62 244.2 173 72.8
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.9e-62 243.4 278 52.2
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 7.1e-62 241.5 167 71.9
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 9.3e-62 241.1 273 50.9
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 1.6e-61 240.4 276 52.5
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 7.9e-61 238.0 223 57.4
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 3.0e-60 236.1 281 48.8
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 1.9e-59 233.4 186 65.6
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 2.8e-58 229.6 159 74.2
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 2.8e-58 229.6 172 66.3
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 1.4e-57 227.3 178 66.3
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 3.4e-56 222.6 145 77.2
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 2.2e-55 219.9 167 66.5
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 1.1e-54 217.6 175 65.7
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 7.9e-53 211.5 167 66.5
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 1.1e-51 207.6 146 69.9
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 2.8e-50 203.0 167 60.5
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 6.3e-50 201.8 268 49.3
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 1.8e-44 183.7 175 55.4
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 1.1e-43 181.0 116 75.9
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 1.9e-43 180.3 225 49.8
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 3.3e-43 179.5 264 42.8
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 7.4e-43 178.3 125 68.8
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 1.5e-40 170.6 168 55.4
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 5.9e-40 168.7 114 73.7
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 1.7e-39 167.2 167 52.7
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 4.6e-37 159.1 167 52.1
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 3.3e-19 99.8 181 42.0
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 9.7e-19 98.2 113 48.7
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.0e-15 88.2 148 40.5


User provided reference genes

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