Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 1.7e-288 995.3 524 100.0
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 3.0e-269 931.4 529 93.4
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 2.6e-164 582.8 519 62.8
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 2.9e-155 552.7 526 60.3
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 9.4e-154 547.7 518 59.5
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 2.1e-153 546.6 518 59.7
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 2.0e-151 540.0 505 63.0
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 3.4e-151 539.3 524 56.9
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 4.0e-144 515.8 522 59.8
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 4.9e-142 508.8 525 56.4
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 6.3e-142 508.4 533 56.3
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 5.4e-141 505.4 529 56.1
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 1.6e-140 503.8 525 55.2
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 2.3e-139 500.0 527 56.4
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 4.3e-138 495.7 528 55.5
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 2.8e-137 493.0 521 54.9
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 7.5e-135 485.0 524 55.5
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 1.3e-134 484.2 526 54.4
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 2.9e-134 483.0 523 53.9
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 8.3e-134 481.5 528 54.9
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 1.7e-131 473.8 550 51.1
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 3.0e-131 473.0 523 52.8
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 3.9e-131 472.6 523 52.8
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 6.6e-131 471.9 505 53.7
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.1e-130 471.1 523 52.8
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.9e-130 470.3 523 52.6
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 1.2e-129 467.6 532 52.8
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 1.8e-128 463.8 540 51.7
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 2.6e-127 459.9 510 53.5
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 4.4e-127 459.1 517 52.2
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 5.8e-127 458.8 532 52.4
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 8.3e-126 454.9 533 52.0
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 3.9e-123 446.0 519 51.1
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 9.5e-122 441.4 546 49.5
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 1.2e-121 441.0 517 50.9
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.6e-121 440.7 512 51.2
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 2.8e-121 439.9 502 51.4
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 2.3e-120 436.8 543 50.6
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 5.2e-120 435.6 537 51.0
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.5e-119 434.1 512 50.6
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 7.5e-119 431.8 529 49.9
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 9.9e-119 431.4 566 48.6
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 2.9e-118 429.9 545 48.3
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 2.9e-118 429.9 505 50.3
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 1.1e-117 427.9 535 48.4
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 1.4e-117 427.6 527 48.4
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 7.1e-117 425.2 538 48.7
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 9.2e-117 424.9 519 48.9
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 2.1e-116 423.7 518 50.8
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 4.6e-116 422.5 528 49.8
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 1.0e-115 421.4 518 49.8
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 3.9e-115 419.5 613 44.7
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 3.3e-114 416.4 515 51.7
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 1.2e-113 414.5 513 49.9
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 1.6e-113 414.1 539 49.7
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 1.6e-113 414.1 516 50.6
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 2.1e-113 413.7 520 50.4
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 8.1e-113 411.8 509 50.1
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 8.1e-113 411.8 525 48.0
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 2.4e-112 410.2 517 48.5
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 1.2e-111 407.9 537 47.1
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 2.0e-111 407.1 530 48.1
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 2.0e-111 407.1 546 46.7
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 3.8e-110 402.9 523 48.6
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 1.9e-109 400.6 537 46.7
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 2.4e-109 400.2 514 48.1
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 4.1e-109 399.4 529 47.3
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 5.4e-109 399.1 544 47.2
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 2.7e-108 396.7 521 47.6
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 6.6e-107 392.1 531 46.0
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 1.1e-106 391.3 516 48.1
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 1.5e-106 391.0 372 57.0
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 1.9e-106 390.6 510 47.8
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 5.6e-106 389.0 534 46.3
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 2.8e-105 386.7 520 46.7
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 8.1e-105 385.2 528 47.0
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 5.2e-104 382.5 528 45.8
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 1.5e-103 380.9 527 47.2
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 1.5e-103 380.9 515 47.6
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 9.9e-103 378.3 523 48.0
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 3.8e-102 376.3 511 48.5
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 2.1e-100 370.5 515 45.8
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 3.5e-100 369.8 530 45.8
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 4.6e-100 369.4 538 44.6
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 3.9e-99 366.3 524 45.0
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 2.5e-98 363.6 530 45.8
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 3.6e-97 359.8 415 52.8
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 6.2e-97 359.0 516 43.8
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 8.1e-97 358.6 536 44.2
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 1.4e-96 357.8 524 44.1
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 1.8e-96 357.5 541 43.4
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 5.3e-96 355.9 512 44.5
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 6.9e-96 355.5 525 43.8
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 6.9e-96 355.5 516 43.4
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 9.0e-96 355.1 444 48.9
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 2.0e-95 354.0 524 43.9
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 2.6e-95 353.6 520 43.3
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 2.6e-95 353.6 515 47.0
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 4.5e-95 352.8 523 43.4
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 4.5e-95 352.8 541 42.7
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 5.8e-95 352.4 523 43.4
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 7.6e-95 352.1 525 43.2
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 7.6e-95 352.1 516 43.2
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 2.9e-94 350.1 513 43.5
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 3.8e-94 349.7 548 43.2
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 4.9e-94 349.4 530 43.0
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 6.4e-94 349.0 522 43.7
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 8.4e-94 348.6 522 43.7
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 8.4e-94 348.6 529 42.7
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 1.9e-93 347.4 518 44.4
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 2.4e-93 347.1 522 43.5
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.8e-91 340.9 511 43.8
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 4.8e-89 332.8 541 43.8
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 6.2e-89 332.4 520 43.7
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 6.9e-88 328.9 380 52.6
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 4.9e-86 322.8 537 41.3
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 6.7e-83 312.4 384 46.9
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 2.5e-82 310.5 520 42.5
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 3.3e-82 310.1 496 42.3
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 3.7e-81 306.6 536 40.1
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 6.2e-81 305.8 512 40.4
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 1.8e-80 304.3 358 51.7
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 9.0e-80 302.0 520 40.0
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 4.5e-79 299.7 514 42.0
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 5.8e-79 299.3 538 42.6
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 2.5e-77 293.9 528 39.8
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 2.1e-76 290.8 509 42.0
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 3.1e-72 276.9 443 42.2
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 4.1e-72 276.6 457 40.5
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 2.0e-71 274.2 378 46.3
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 4.2e-69 266.5 473 40.4
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 4.2e-69 266.5 557 39.0
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 1.0e-67 261.9 590 35.4
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 9.7e-66 255.4 503 37.2
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 2.0e-63 247.7 495 38.4
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 2.2e-62 244.2 415 38.6
Oeu022163.1 Olea europaea HOM05D003929 ORTHO05D004499 6.5e-62 242.7 271 52.8
Psat4g209200 Pisum sativum HOM05D003929 ORTHO05D004499 1.1e-61 241.9 326 46.6
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 3.3e-58 230.3 414 39.9
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 9.1e-56 222.2 316 47.5
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 5.0e-54 216.5 411 40.1
arahy.Tifrunner.gnm1.ann1.49JIZL Arachis hypogaea HOM05D003929 ORTHO05D004499 1.6e-52 211.5 237 53.6
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.0e-51 208.8 404 37.9
CSS0023375 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 1.8e-51 208.0 269 49.1
Lj9A449T48 Lonicera japonica HOM05D003929 ORTHO05D004499 3.0e-51 207.2 234 52.1
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 2.8e-49 200.7 417 35.7
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 2.8e-49 200.7 460 34.6
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 7.0e-48 196.1 405 36.0
Zm00001eb267680 Zea mays HOM05D003929 ORTHO05D004499 1.7e-41 174.9 510 30.2
Hund02741 Selenicereus undatus HOM05D003929 ORTHO05D004499 2.2e-41 174.5 466 32.6
Os05g0101200 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 2.7e-36 157.5 547 32.2
Mapoly0102s0017 Marchantia polymorpha HOM05D003929 ORTHO05D004499 3.6e-36 157.1 493 32.7
Cfa019127 Carpinus fangiana HOM05D003929 ORTHO05D004499 3.0e-35 154.1 193 48.2
Zm00001eb126680 Zea mays HOM05D003929 ORTHO05D004499 3.7e-33 147.1 460 29.6
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 3.1e-32 144.1 290 36.2
Os01g0107000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 6.1e-28 129.8 219 39.7
Pp3c9_20380 Physcomitrium patens HOM05D003929 ORTHO05D004499 1.0e-27 129.0 246 37.8
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 1.0e-27 129.0 219 39.3
PSO135G0191 Papaver somniferum HOM05D003929 ORTHO05D004499 5.2e-27 126.7 209 44.0
Pp3c15_21860 Physcomitrium patens HOM05D003929 ORTHO05D004499 2.0e-26 124.8 243 38.3
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 1.7e-25 121.7 215 42.8
CBR_g3508 Chara braunii HOM05D003929 ORTHO05D004499 6.3e-25 119.8 296 36.5
AagrBONN_evm.TU.Sc2ySwM_117.2261 Anthoceros agrestis HOM05D003929 ORTHO05D004499 3.3e-21 107.5 231 37.2
SHI17030 Sapria himalayana HOM05D003929 ORTHO05D004499 2.3e-19 101.3 87 63.2
PGSC0003DMG400024502 Solanum tuberosum HOM05D003929 ORTHO05D004499 8.9e-19 99.4 106 52.8
Nitab4.5_0000866g0190 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.5e-18 98.6 120 47.5
SHI17029 Sapria himalayana HOM05D003929 ORTHO05D004499 1.3e-17 95.5 139 43.9
Lj9A449G50 Lonicera japonica HOM05D003929 ORTHO05D004499 2.4e-16 91.3 124 46.8
Actinidia19319 Actinidia chinensis HOM05D003618 ORTHO05D004302 9.5e-13 79.3 177 35.6
ClCG01G013120 Citrullus lanatus HOM05D003929 ORTHO05D004499 2.1e-12 78.2 113 38.9
CBR_g10793 Chara braunii HOM05D027206 ORTHO05D004499 6.2e-12 76.6 70 60.0
Os05g0578000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 7.5e-10 69.7 90 48.9
CBR_g3506 Chara braunii HOM05D003929 ORTHO05D004499 1.7e-09 68.6 68 51.5
Cre10.g454025 Chlamydomonas reinhardtii HOM05D003929 ORTHO05D004499 2.9e-09 67.8 58 60.3
Zm00001eb296750 Zea mays HOM05D003929 ORTHO05D004499 1.4e-08 65.5 82 50.0
MCO04G191 Micromonas commoda HOM05D003929 ORTHO05D004499 3.2e-08 64.3 48 60.4
SHI17025 Sapria himalayana HOM05D003929 ORTHO05D004499 4.6e-07 60.5 44 68.2
AagrBONN_evm.TU.Sc2ySwM_117.2262 Anthoceros agrestis HOM05D003929 ORTHO05D004499 3.0e-06 57.8 61 49.2


User provided reference genes

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