Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 1.1e-160 570.1 331 100.0
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 1.2e-151 540.0 337 95.5
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 4.9e-132 474.9 344 85.8
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 8.7e-113 411.0 343 78.7
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 5.6e-112 408.3 300 85.7
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.2e-83 312.8 181 88.4
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 1.2e-58 231.1 364 51.4
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 1.2e-56 224.6 354 49.2
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 3.8e-52 209.5 344 54.9
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 3.8e-52 209.5 358 51.1
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 1.5e-51 207.6 342 53.8
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 5.6e-51 205.7 352 54.8
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 2.8e-50 203.4 367 51.2
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 3.4e-48 196.4 343 53.1
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 1.4e-46 191.0 341 52.2
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 3.3e-43 179.9 355 50.4
arahy.Tifrunner.gnm1.ann1.ASXI8Q Arachis hypogaea HOM05D005773 ORTHO05D006930 1.2e-37 161.4 96 85.4
arahy.Tifrunner.gnm1.ann1.V4J88K Arachis hypogaea HOM05D005773 ORTHO05D006930 3.1e-33 146.7 117 68.4
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 5.2e-33 146.0 378 33.1
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 6.8e-33 145.6 396 38.1
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 2.0e-32 144.1 378 33.1
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 5.8e-32 142.5 314 43.6
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 9.8e-32 141.7 387 35.4
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 1.3e-31 141.4 368 39.1
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 1.7e-31 141.0 386 41.2
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 8.3e-31 138.7 370 41.1
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 1.1e-30 138.3 376 32.7
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 1.4e-30 137.9 387 34.4
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 1.9e-30 137.5 384 38.3
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 2.4e-30 137.1 120 55.8
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 2.4e-30 137.1 359 41.8
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 5.4e-30 136.0 323 40.2
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 6.0e-29 132.5 362 41.2
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 7.8e-29 132.1 371 41.5
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 1.3e-28 131.3 388 33.2
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 1.7e-28 131.0 385 35.3
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 3.9e-28 129.8 384 38.3
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 5.1e-28 129.4 370 38.9
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 8.6e-28 128.6 368 38.3
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 8.6e-28 128.6 368 38.3
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 1.1e-27 128.3 365 37.8
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 1.1e-27 128.3 385 31.2
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 1.5e-27 127.9 368 38.0
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 3.3e-27 126.7 370 38.1
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 3.3e-27 126.7 342 33.0
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 5.6e-27 125.9 361 39.9
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 5.6e-27 125.9 389 39.8
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 9.5e-27 125.2 101 60.4
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 2.1e-26 124.0 398 38.2
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 2.8e-26 123.6 381 34.9
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 2.8e-26 123.6 380 35.0
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 3.6e-26 123.2 109 54.1
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 4.7e-26 122.9 361 35.2
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 6.2e-26 122.5 384 38.0
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 8.1e-26 122.1 375 30.1
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 1.8e-25 120.9 137 48.9
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 2.3e-25 120.6 357 31.4
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 2.3e-25 120.6 390 34.1
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 2.3e-25 120.6 317 32.2
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 3.1e-25 120.2 108 55.6
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 5.2e-25 119.4 332 31.6
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 5.2e-25 119.4 137 48.2
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 2.6e-24 117.1 415 34.2
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 5.8e-24 115.9 406 29.1
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 1.3e-23 114.8 358 40.5
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 1.7e-23 114.4 304 38.8
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 1.7e-23 114.4 103 60.2
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 2.9e-23 113.6 382 37.2
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 3.8e-23 113.2 138 44.9
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 6.4e-23 112.5 357 38.7
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 1.4e-22 111.3 354 38.4
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 3.2e-22 110.2 106 51.9
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 3.2e-22 110.2 367 34.1
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 4.1e-22 109.8 417 35.7
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 5.4e-22 109.4 333 32.7
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 7.1e-22 109.0 319 41.1
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 9.2e-22 108.6 115 49.6
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 1.2e-21 108.2 380 37.4
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.2e-21 108.2 364 33.0
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 1.6e-21 107.8 330 28.5
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 1.6e-21 107.8 99 58.6
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 2.7e-21 107.1 122 49.2
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 3.5e-21 106.7 96 60.4
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 3.5e-21 106.7 331 36.9
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 4.6e-21 106.3 98 56.1
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 4.6e-21 106.3 116 50.9
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 7.8e-21 105.5 126 47.6
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 7.8e-21 105.5 345 41.2
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 1.0e-20 105.1 102 52.0
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.3e-20 104.8 125 48.0
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 1.7e-20 104.4 179 36.3
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.7e-20 104.4 391 31.5
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 3.9e-20 103.2 116 50.0
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 5.1e-20 102.8 353 36.5
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 5.1e-20 102.8 100 56.0
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 6.6e-20 102.4 132 46.2
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.1e-19 101.7 325 39.4
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.9e-19 100.9 96 57.3
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 1.9e-19 100.9 366 36.1
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 2.5e-19 100.5 100 53.0
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 4.3e-19 99.8 261 33.3
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 5.6e-19 99.4 261 33.3
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 9.6e-19 98.6 124 44.4
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 1.6e-18 97.8 98 53.1
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 2.1e-18 97.4 357 33.1
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 3.6e-18 96.7 99 48.5
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 3.6e-18 96.7 363 33.3
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 4.7e-18 96.3 99 49.5
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 6.2e-18 95.9 100 53.0
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 6.2e-18 95.9 106 50.0
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 3.1e-17 93.6 99 45.5
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 1.5e-16 91.3 340 31.2
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 3.4e-16 90.1 97 50.5
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 5.4e-14 82.8 70 55.7
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 3.9e-12 76.6 74 50.0
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 6.6e-12 75.9 129 34.9
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 1.5e-11 74.7 95 42.1
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 1.5e-11 74.7 63 60.3
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 4.5e-08 63.2 51 60.8
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 3.8e-07 60.1 101 37.6
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 4.9e-07 59.7 80 45.0
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 4.9e-07 59.7 55 50.9
Pp3c17_20330 Physcomitrium patens HOM05D029403 ORTHO05D006930 1.1e-06 58.5 56 50.0
arahy.Tifrunner.gnm1.ann1.Y6L4BT Arachis hypogaea HOM05D000237 ORTHO05D017465 2.4e-06 57.4 36 80.6
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 5.4e-06 56.2 90 40.0


User provided reference genes

Program Settings