Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 1.6e-74 282.7 151 100.0
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 6.2e-50 201.1 115 93.0
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 8.2e-34 147.5 84 88.1
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 1.1e-33 147.1 84 89.3
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 1.8e-33 146.4 81 91.4
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 4.1e-33 145.2 84 88.1
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 4.1e-33 145.2 83 90.4
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 5.3e-33 144.8 84 86.9
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 9.1e-33 144.1 83 88.0
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 1.2e-32 143.7 84 85.7
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 1.5e-32 143.3 80 90.0
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 1.5e-32 143.3 84 85.7
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 2.0e-32 142.9 83 89.2
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 2.0e-32 142.9 84 84.5
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 3.4e-32 142.1 83 88.0
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 3.4e-32 142.1 84 86.9
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 3.4e-32 142.1 84 84.5
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 4.5e-32 141.7 84 86.9
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 1.0e-31 140.6 84 85.7
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 2.9e-31 139.0 84 83.3
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 8.5e-31 137.5 81 84.0
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 1.1e-30 137.1 84 82.1
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 1.4e-30 136.7 78 88.5
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 1.9e-30 136.3 80 83.8
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 3.2e-30 135.6 84 83.3
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 4.2e-30 135.2 88 76.1
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 7.2e-30 134.4 84 77.4
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 7.2e-30 134.4 81 80.2
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 7.2e-30 134.4 84 78.6
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 1.2e-29 133.7 83 79.5
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 1.6e-29 133.3 83 80.7
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 2.1e-29 132.9 76 86.8
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 2.1e-29 132.9 88 75.0
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 2.1e-29 132.9 84 76.2
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 2.7e-29 132.5 84 76.2
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 3.6e-29 132.1 84 82.1
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 3.6e-29 132.1 84 82.1
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 4.6e-29 131.7 80 82.5
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 6.1e-29 131.3 81 80.2
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 6.1e-29 131.3 81 80.2
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 7.9e-29 131.0 81 81.5
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.0e-28 130.6 84 81.0
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.0e-28 130.6 84 81.0
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 1.4e-28 130.2 83 77.1
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 1.8e-28 129.8 84 79.8
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 1.8e-28 129.8 84 79.8
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 2.3e-28 129.4 76 84.2
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 2.3e-28 129.4 76 84.2
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 5.1e-28 128.3 85 78.8
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 6.7e-28 127.9 85 77.6
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 6.7e-28 127.9 85 77.6
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 6.7e-28 127.9 81 80.2
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 8.8e-28 127.5 85 77.6
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 8.8e-28 127.5 84 78.6
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 1.1e-27 127.1 85 77.6
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 1.1e-27 127.1 85 77.6
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 1.1e-27 127.1 85 77.6
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 1.5e-27 126.7 87 77.0
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.0e-27 126.3 80 77.5
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 2.0e-27 126.3 85 76.5
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 2.6e-27 125.9 85 76.5
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 3.3e-27 125.6 81 77.8
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 3.3e-27 125.6 81 77.8
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 4.4e-27 125.2 81 77.8
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 5.7e-27 124.8 85 75.3
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 9.7e-27 124.0 85 76.5
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 1.3e-26 123.6 84 75.0
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 1.3e-26 123.6 71 88.7
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 1.7e-26 123.2 84 76.2
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 6.3e-26 121.3 84 73.8
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 8.2e-26 120.9 80 73.8
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 1.1e-25 120.6 84 75.0
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 1.8e-25 119.8 86 72.1
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 2.4e-25 119.4 83 73.5
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 5.3e-25 118.2 71 85.9
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 6.9e-25 117.9 83 69.9
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 4.5e-24 115.2 84 71.4
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 7.7e-24 114.4 83 68.7
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 2.2e-23 112.8 78 74.4
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.9e-22 109.8 69 78.3
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.9e-22 109.8 68 80.9
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 1.9e-22 109.8 82 67.1
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 3.2e-22 109.0 71 76.1
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.2e-21 107.1 68 79.4
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 1.6e-21 106.7 88 67.0
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 6.1e-21 104.8 63 84.1
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 7.9e-21 104.4 76 75.0
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 7.9e-21 104.4 74 77.0
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 7.9e-21 104.4 68 73.5
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 1.0e-20 104.0 82 72.0
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 3.0e-20 102.4 68 73.5
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 1.1e-19 100.5 60 81.7
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 1.5e-19 100.1 61 82.0
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 4.4e-19 98.6 82 69.5
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 7.4e-19 97.8 79 67.1
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 4.8e-18 95.1 55 85.5
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 1.8e-17 93.2 73 65.8
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 1.6e-16 90.1 78 60.3
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 1.3e-15 87.0 73 61.6
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 1.7e-15 86.7 99 52.5
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 2.5e-14 82.8 63 69.8
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 5.5e-14 81.6 49 81.6
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 4.0e-12 75.5 52 67.3
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 4.4e-11 72.0 84 57.1
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 6.3e-10 68.2 66 53.0
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 8.2e-10 67.8 81 45.7
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 7.0e-09 64.7 55 65.5
TAR369G0162 Trochodendron aralioides HOM05D002795 ORTHO05D000638 5.0e-07 58.5 38 73.7
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 1.1e-06 57.4 62 45.2
Hma1.2p1_0735F.1_g210440 Hydrangea macrophylla HOM05D003704 ORTHO05D005892 5.5e-06 55.1 32 87.5


User provided reference genes

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