Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RSI5EI Arachis hypogaea HOM05D004654 ORTHO05D005414 5.9e-101 370.9 196 100.0
arahy.Tifrunner.gnm1.ann1.C1RHT9 Arachis hypogaea HOM05D004654 ORTHO05D005414 2.2e-55 219.5 192 64.1
Glyma.11G204100 Glycine max HOM05D004654 ORTHO05D005414 1.7e-31 140.2 209 51.7
Ca_15106_v3 Cicer arietinum L. HOM05D004654 ORTHO05D005414 1.9e-30 136.7 208 48.1
VMungo0540G1596 Vigna mungo HOM05D004654 ORTHO05D005414 2.5e-30 136.3 199 48.7
Psat5g143960 Pisum sativum HOM05D004654 ORTHO05D005414 7.1e-30 134.8 206 47.6
Phvul.006G084100 Phaseolus vulgaris HOM05D004654 ORTHO05D005414 9.3e-30 134.4 193 50.3
Glyma.18G046900 Glycine max HOM05D004654 ORTHO05D005414 1.6e-29 133.7 209 48.8
Lj6g0008387 Lotus japonicus HOM05D004654 ORTHO05D005414 5.6e-27 125.2 194 46.9
Lalb_Chr17g0345801 Lupinus albus HOM05D004654 ORTHO05D005414 5.6e-27 125.2 191 50.8
Medtr3g064040 Medicago truncatula HOM05D004654 ORTHO05D005414 5.6e-27 125.2 211 46.0
TPR.G37307 Trifolium pratense HOM05D004654 ORTHO05D005414 5.6e-27 125.2 185 45.4
Manes.02G082600 Manihot esculenta HOM05D004654 ORTHO05D005414 1.3e-26 124.0 201 41.8
Manes.01G125100 Manihot esculenta HOM05D004654 ORTHO05D005414 4.8e-26 122.1 192 43.8
THA.LOC104822158 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 1.1e-25 120.9 185 43.2
Sp5g20670 Schrenkiella parvula HOM05D004654 ORTHO05D005414 1.5e-24 117.1 193 42.5
CiPaw.07G102900 Carya illinoinensis HOM05D004654 ORTHO05D005414 1.7e-23 113.6 195 44.1
FAN19G2236 Fragaria x ananassa HOM05D004654 ORTHO05D005414 2.9e-23 112.8 187 44.4
Thhalv10019176m.g Eutrema salsugineum HOM05D004654 ORTHO05D005414 3.8e-23 112.5 186 40.3
Sabra17G0119000 Salix brachista HOM05D004654 ORTHO05D005414 4.9e-23 112.1 180 43.9
arahy.Tifrunner.gnm1.ann1.70EH4T Arachis hypogaea HOM05D004654 ORTHO05D005414 6.5e-23 111.7 202 44.6
Lalb_Chr20g0117181 Lupinus albus HOM05D004654 ORTHO05D005414 6.5e-23 111.7 214 40.7
Aa31LG2G2610 Aethionema arabicum HOM05D004654 ORTHO05D005414 1.1e-22 110.9 193 39.9
CiPaw.13G067300 Carya illinoinensis HOM05D004654 ORTHO05D005414 1.1e-22 110.9 196 43.4
FAN28G0174 Fragaria x ananassa HOM05D004654 ORTHO05D005414 1.1e-22 110.9 186 43.5
FAN26G0407 Fragaria x ananassa HOM05D004654 ORTHO05D005414 1.4e-22 110.5 184 44.0
FAN28G0874 Fragaria x ananassa HOM05D004654 ORTHO05D005414 1.4e-22 110.5 186 43.5
arahy.Tifrunner.gnm1.ann1.6F687N Arachis hypogaea HOM05D004654 ORTHO05D005414 2.5e-22 109.8 202 44.1
Carub.0002s1154 Capsella rubella HOM05D004654 ORTHO05D005414 3.2e-22 109.4 189 39.2
COL.COLO4_00809 Corchorus olitorius HOM05D004654 ORTHO05D005414 4.2e-22 109.0 172 43.0
CARHR057580 Cardamine hirsuta HOM05D004654 ORTHO05D005414 5.5e-22 108.6 182 40.7
GSVIVG01005258001 Vitis vinifera HOM05D004654 ORTHO05D005414 7.1e-22 108.2 192 43.8
AL2G22850 Arabidopsis lyrata HOM05D004654 ORTHO05D005414 9.3e-22 107.8 172 42.4
CiPaw.03G008900 Carya illinoinensis HOM05D004654 ORTHO05D005414 1.2e-21 107.5 190 43.7
AT1G65720 Arabidopsis thaliana HOM05D004654 ORTHO05D005414 1.6e-21 107.1 191 41.9
THA.LOC104823831 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 2.1e-21 106.7 194 42.3
Duzib138G0480 Durio zibethinus HOM05D004654 ORTHO05D005414 2.7e-21 106.3 169 42.6
Potri.017G142100 Populus trichocarpa HOM05D004654 ORTHO05D005414 2.7e-21 106.3 180 42.8
THA.LOC104805666 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 2.7e-21 106.3 194 42.8
Haze_14051 Corylus avellana HOM05D004654 ORTHO05D005414 3.5e-21 105.9 189 41.8
Gohir.A08G038100 Gossypium hirsutum HOM05D004654 ORTHO05D005414 3.5e-21 105.9 170 40.0
Atru.chr1.2194 Acer truncatum HOM05D004654 ORTHO05D005414 4.6e-21 105.5 183 38.8
Cfa008008 Carpinus fangiana HOM05D004654 ORTHO05D005414 7.9e-21 104.8 190 41.1
Sabra04G0052000 Salix brachista HOM05D004654 ORTHO05D005414 7.9e-21 104.8 190 41.1
QL02p056026 Quercus lobata HOM05D004654 ORTHO05D005414 1.0e-20 104.4 210 41.0
CANSAT78G0950 Cannabis sativa HOM05D004654 ORTHO05D005414 1.3e-20 104.0 180 40.0
Cpa.g.sc108.18 Carica papaya HOM05D004654 ORTHO05D005414 1.3e-20 104.0 197 41.6
Gorai.008G054900 Gossypium raimondii HOM05D004654 ORTHO05D005414 1.8e-20 103.6 168 42.9
Ciclev10012875m.g Citrus clementina HOM05D004654 ORTHO05D005414 2.3e-20 103.2 191 38.7
Potri.004G078500 Populus trichocarpa HOM05D004654 ORTHO05D005414 2.3e-20 103.2 188 42.6
QL02p054970 Quercus lobata HOM05D004654 ORTHO05D005414 2.3e-20 103.2 213 40.8
MD09G1282600 Malus domestica HOM05D004654 ORTHO05D005414 3.0e-20 102.8 191 41.4
A07p32950 Brassica napus HOM05D004654 ORTHO05D005414 6.7e-20 101.7 171 40.9
BolC6t39010H Brassica oleracea HOM05D004654 ORTHO05D005414 6.7e-20 101.7 175 42.9
Gohir.D12G051600 Gossypium hirsutum HOM05D004654 ORTHO05D005414 6.7e-20 101.7 168 42.3
BraA07t30922Z Brassica rapa HOM05D004654 ORTHO05D005414 8.7e-20 101.3 173 42.8
Gohir.D08G048300 Gossypium hirsutum HOM05D004654 ORTHO05D005414 8.7e-20 101.3 170 40.0
Gorai.004G047800 Gossypium raimondii HOM05D004654 ORTHO05D005414 8.7e-20 101.3 170 40.0
Lalb_Chr10g0103991 Lupinus albus HOM05D004654 ORTHO05D005414 8.7e-20 101.3 167 44.9
MD17G1272400 Malus domestica HOM05D004654 ORTHO05D005414 2.5e-19 99.8 188 39.9
Prupe.3G011600 Prunus persica HOM05D004654 ORTHO05D005414 4.3e-19 99.0 194 39.7
Thecc.04G056200 Theobroma cacao HOM05D004654 ORTHO05D005414 4.3e-19 99.0 159 42.1
Gohir.A12G053100 Gossypium hirsutum HOM05D004654 ORTHO05D005414 5.7e-19 98.6 164 40.9
A02p13350 Brassica napus HOM05D004654 ORTHO05D005414 7.4e-19 98.2 174 42.5
BraA02t06392Z Brassica rapa HOM05D004654 ORTHO05D005414 7.4e-19 98.2 174 42.5
C06p39170 Brassica napus HOM05D004654 ORTHO05D005414 9.7e-19 97.8 188 41.0
BcaC03g14719 Brassica carinata HOM05D004654 ORTHO05D005414 1.3e-18 97.4 181 40.3
C02p21610 Brassica napus HOM05D004654 ORTHO05D005414 1.3e-18 97.4 181 40.3
BolC2t08298H Brassica oleracea HOM05D004654 ORTHO05D005414 1.3e-18 97.4 177 42.4
CiPaw.03G260700 Carya illinoinensis HOM05D004654 ORTHO05D005414 4.8e-18 95.5 183 41.0
Ah.04g162850 Amaranthus hybridus HOM05D004654 ORTHO05D005414 2.4e-17 93.2 210 35.7
PGR004G1881 Punica granatum HOM05D004654 ORTHO05D005414 5.3e-17 92.0 201 38.3
ClCG05G011320 Citrullus lanatus HOM05D004654 ORTHO05D005414 6.9e-17 91.7 182 39.6
Eucgr.F02926 Eucalyptus grandis HOM05D004654 ORTHO05D005414 6.9e-17 91.7 123 48.0
PSO566G0049 Papaver somniferum HOM05D004654 ORTHO05D005414 4.5e-16 89.0 210 36.2
PSO566G0349 Papaver somniferum HOM05D004654 ORTHO05D005414 4.5e-16 89.0 210 36.2
Ah.06g191460 Amaranthus hybridus HOM05D004654 ORTHO05D005414 5.9e-16 88.6 193 36.3
Actinidia17131 Actinidia chinensis HOM05D004654 ORTHO05D005414 1.3e-15 87.4 203 38.9
EL10Ac4g08895 Beta vulgaris HOM05D004654 ORTHO05D005414 1.3e-15 87.4 112 50.9
HanXRQChr16g0532651 Helianthus annuus HOM05D004654 ORTHO05D005414 1.3e-15 87.4 181 37.6
AUR62004739 Chenopodium quinoa HOM05D004654 ORTHO05D005414 1.7e-15 87.0 225 35.6
MBI03_g34062_MAGBIO Magnolia biondii HOM05D004654 ORTHO05D005414 2.9e-15 86.3 192 40.1
PSO782G3544 Papaver somniferum HOM05D004654 ORTHO05D005414 3.8e-15 85.9 210 36.2
Sed0014762 Sechium edule HOM05D004654 ORTHO05D005414 3.8e-15 85.9 187 38.5
AUR62037512 Chenopodium quinoa HOM05D004654 ORTHO05D005414 5.0e-15 85.5 217 35.9
MBI03_g05124_MAGBIO Magnolia biondii HOM05D004654 ORTHO05D005414 5.0e-15 85.5 202 40.1
Aqoxy5G02573 Aquilegia oxysepala HOM05D004654 ORTHO05D005414 1.4e-14 84.0 212 35.4
TAR622G1006 Trochodendron aralioides HOM05D004654 ORTHO05D005414 1.9e-14 83.6 183 36.1
Lsat_1_v5_gn_8_113741 Lactuca sativa HOM05D004654 ORTHO05D005414 2.5e-14 83.2 206 37.9
TAR374G0741 Trochodendron aralioides HOM05D004654 ORTHO05D005414 2.5e-14 83.2 207 37.2
CsaV3_3G021140 Cucumis sativus L. HOM05D004654 ORTHO05D005414 3.2e-14 82.8 171 38.0
Lsat_1_v5_gn_3_68821 Lactuca sativa HOM05D004654 ORTHO05D005414 3.2e-14 82.8 196 37.2
vmacro20421 Vaccinium macrocarpon HOM05D004654 ORTHO05D005414 4.2e-14 82.4 207 34.8
Peaxi162Scf00918g00026 Petunia axillaris HOM05D004654 ORTHO05D005414 5.5e-14 82.0 210 36.7
Dinv03197 Davidia involucrata HOM05D004654 ORTHO05D005414 7.2e-14 81.6 195 34.9
FAN23G2643 Fragaria x ananassa HOM05D004654 ORTHO05D005414 7.2e-14 81.6 137 42.3
MELO3C020251.2 Cucumis melo HOM05D004654 ORTHO05D005414 9.4e-14 81.3 171 36.8
Sc09g0004620 Simmondsia chinensis HOM05D004654 ORTHO05D005414 1.2e-13 80.9 212 35.8
TWI77G0610 Tripterygium wilfordii HOM05D004654 ORTHO05D005414 2.1e-13 80.1 197 37.1
vmacro23510 Vaccinium macrocarpon HOM05D004654 ORTHO05D005414 3.6e-13 79.3 213 33.8
Actinidia35698 Actinidia chinensis HOM05D004654 ORTHO05D005414 4.6e-13 79.0 177 39.0
CDE04G3704 Ceratophyllum demersum HOM05D004654 ORTHO05D005414 4.6e-13 79.0 193 34.7
Haze_14062 Corylus avellana HOM05D004654 ORTHO05D005414 4.6e-13 79.0 130 43.1
CDE07G1822 Ceratophyllum demersum HOM05D004654 ORTHO05D005414 6.1e-13 78.6 191 34.0
Os03g0110300 Oryza sativa ssp. japonica HOM05D004654 ORTHO05D005414 6.1e-13 78.6 173 36.4
MD03G1273600 Malus domestica HOM05D004654 ORTHO05D005414 7.9e-13 78.2 156 41.0
PGSC0003DMG400024083 Solanum tuberosum HOM05D004654 ORTHO05D005414 1.8e-12 77.0 133 38.3
Hma1.2p1_0034F.1_g021540 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 2.3e-12 76.6 190 35.8
HPP92_022519 Vanilla planifolia HOM05D004654 ORTHO05D005414 2.3e-12 76.6 187 35.8
Rhsim08G0023400 Rhododendron simsii HOM05D004654 ORTHO05D005414 3.9e-12 75.9 194 35.6
Solyc03g031950.3 Solanum lycopersicum HOM05D004654 ORTHO05D005414 3.9e-12 75.9 133 37.6
Lsat_1_v5_gn_2_72380 Lactuca sativa HOM05D004654 ORTHO05D005414 5.1e-12 75.5 181 33.7
Cc07_g12430 Coffea canephora HOM05D004654 ORTHO05D005414 8.8e-12 74.7 97 44.3
ECA246G3021 Erigeron canadensis HOM05D004654 ORTHO05D005414 1.5e-11 73.9 196 34.7
Sopen03g005810 Solanum pennellii HOM05D004654 ORTHO05D005414 1.5e-11 73.9 133 36.8
DCAR_002994 Daucus carota HOM05D004654 ORTHO05D005414 2.5e-11 73.2 188 37.2
TAR374G0450 Trochodendron aralioides HOM05D004654 ORTHO05D005414 2.5e-11 73.2 90 47.8
Dinv28280 Davidia involucrata HOM05D004654 ORTHO05D005414 4.3e-11 72.4 194 35.6
Hma1.2p1_2924F.1_g330430 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 5.7e-11 72.0 138 39.9
HPP92_007306 Vanilla planifolia HOM05D004654 ORTHO05D005414 9.7e-11 71.2 183 35.0
ATR0618G257 Amborella trichopoda HOM05D004654 ORTHO05D005414 1.3e-10 70.9 189 34.4
Oeu034013.1 Olea europaea HOM05D004654 ORTHO05D005414 3.7e-10 69.3 185 35.1
MBI06_g28670_MAGBIO Magnolia biondii HOM05D004654 ORTHO05D005414 4.8e-10 68.9 194 35.1
Gohir.A04G103050 Gossypium hirsutum HOM05D004654 ORTHO05D005414 6.3e-10 68.6 58 58.6
HanXRQChr15g0486441 Helianthus annuus HOM05D004654 ORTHO05D005414 6.3e-10 68.6 154 31.8
Zm00001eb000770 Zea mays HOM05D004654 ORTHO05D005414 6.3e-10 68.6 161 33.5
Migut.D00607 Erythranthe guttata HOM05D004654 ORTHO05D005414 1.1e-09 67.8 218 33.0
unitig_578.g16656 Utricularia gibba HOM05D004654 ORTHO05D005414 1.4e-09 67.4 69 49.3
BcaB03g15322 Brassica carinata HOM05D004654 ORTHO05D005414 1.8e-09 67.0 63 58.7
Hma1.2p1_0085F.1_g044140 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 1.8e-09 67.0 210 33.3
unitig_85.g27201 Utricularia gibba HOM05D004654 ORTHO05D005414 3.1e-09 66.2 70 52.9
Oeu024775.2 Olea europaea HOM05D004654 ORTHO05D005414 5.3e-09 65.5 208 31.7
HanXRQChr15g0485191 Helianthus annuus HOM05D004654 ORTHO05D005414 6.9e-09 65.1 199 31.7
Nn4g24900 Nelumbo nucifera HOM05D004654 ORTHO05D005414 9.1e-09 64.7 120 40.8
Nitab4.5_0008713g0040 Nicotiana tabacum HOM05D004654 ORTHO05D005414 1.2e-08 64.3 216 31.0
Os10g0483900 Oryza sativa ssp. japonica HOM05D004654 ORTHO05D005414 2.6e-08 63.2 209 33.0
SGA_v2.0_scaffold247G44889 Striga asiatica HOM05D004654 ORTHO05D005414 2.6e-08 63.2 95 41.1
SalBow6G0287 Salvia bowleyana HOM05D004654 ORTHO05D005414 3.4e-08 62.8 167 33.5
PGSC0003DMG400037923 Solanum tuberosum HOM05D004654 ORTHO05D005414 7.7e-08 61.6 207 32.9
SGA_v2.0_scaffold8G04582 Striga asiatica HOM05D004654 ORTHO05D005414 1.0e-07 61.2 182 32.4
Zm00001eb045470 Zea mays HOM05D004654 ORTHO05D005414 1.0e-07 61.2 179 31.8
DCAR_000947 Daucus carota HOM05D004654 ORTHO05D005414 1.3e-07 60.8 100 38.0
DCAR_014130 Daucus carota HOM05D004654 ORTHO05D005414 5.0e-07 58.9 176 33.5
Nitab4.5_0003016g0040 Nicotiana tabacum HOM05D004654 ORTHO05D005414 1.4e-06 57.4 212 28.8
Zm00001eb221440 Zea mays HOM05D004654 ORTHO05D005414 2.5e-06 56.6 187 31.0
unitig_90.g27472 Utricularia gibba HOM05D004654 ORTHO05D005414 5.5e-06 55.5 118 38.1
Lj5C23T4 Lonicera japonica HOM05D004654 ORTHO05D005414 7.2e-06 55.1 109 37.6
Peaxi162Scf00784g00044 Petunia axillaris HOM05D004654 ORTHO05D005414 9.4e-06 54.7 79 40.5


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