Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-47 192.2 90 100.0
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-47 192.2 90 100.0
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-47 192.2 90 100.0
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-47 192.2 90 100.0
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-47 192.2 90 100.0
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-47 192.2 90 100.0
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-47 192.2 90 100.0
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-47 192.2 90 100.0
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-47 192.2 90 100.0
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-47 192.2 90 100.0
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 5.0e-47 190.7 90 98.9
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 8.6e-47 189.9 90 98.9
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 1.4e-44 182.6 90 95.6
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 1.4e-44 182.6 90 95.6
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 1.4e-44 182.6 90 95.6
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 1.4e-44 182.6 90 95.6
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 1.8e-44 182.2 89 95.5
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 1.8e-44 182.2 89 95.5
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 1.8e-44 182.2 89 95.5
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 3.0e-44 181.4 90 94.4
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 4.0e-44 181.0 90 94.4
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 6.8e-44 180.3 90 94.4
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 1.5e-43 179.1 90 92.2
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 2.0e-43 178.7 90 93.3
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 2.6e-43 178.3 90 93.3
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 2.6e-43 178.3 90 93.3
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 2.6e-43 178.3 90 93.3
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 2.6e-43 178.3 90 93.3
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 2.6e-43 178.3 90 93.3
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 2.6e-43 178.3 90 93.3
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 2.6e-43 178.3 90 93.3
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 2.6e-43 178.3 90 93.3
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 2.6e-43 178.3 90 93.3
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 2.6e-43 178.3 90 93.3
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 2.6e-43 178.3 90 93.3
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 7.5e-43 176.8 91 93.4
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 7.5e-43 176.8 91 93.4
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 1.3e-42 176.0 90 92.2
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 1.7e-42 175.6 90 92.2
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-42 175.6 81 100.0
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-42 175.6 81 100.0
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-42 175.6 81 100.0
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-42 175.6 81 100.0
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-42 175.6 81 100.0
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 1.7e-42 175.6 88 93.2
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 2.9e-42 174.9 90 91.1
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 2.9e-42 174.9 90 92.2
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 6.4e-42 173.7 91 92.3
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-41 172.2 86 93.0
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 3.2e-41 171.4 90 90.0
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 7.0e-41 170.2 90 90.0
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 9.2e-41 169.9 91 90.1
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 1.2e-40 169.5 89 91.0
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 1.2e-40 169.5 89 89.9
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 1.2e-40 169.5 90 90.0
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 1.6e-40 169.1 87 90.8
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 1.6e-40 169.1 87 90.8
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.5e-40 167.9 86 90.7
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.5e-40 167.9 90 90.0
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.5e-40 167.9 90 88.9
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 6.0e-40 167.2 80 96.2
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 1.3e-39 166.0 91 89.0
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.0e-39 164.9 90 85.6
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.5e-38 162.5 90 86.7
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.5e-38 161.8 90 84.4
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 3.3e-38 161.4 91 86.8
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 3.3e-38 161.4 80 93.8
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.5e-38 159.8 90 85.6
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 1.2e-37 159.5 87 86.2
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.1e-37 158.7 81 90.1
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 4.7e-37 157.5 77 93.5
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 6.2e-37 157.1 84 89.3
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 6.2e-37 157.1 84 89.3
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 3.1e-36 154.8 76 96.1
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 3.1e-36 154.8 76 96.1
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 4.0e-36 154.5 88 83.0
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.2e-36 154.1 81 87.7
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 2.0e-35 152.1 84 86.9
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 2.6e-35 151.8 90 82.2
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 3.4e-35 151.4 88 79.5
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 7.5e-35 150.2 89 78.7
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 2.2e-34 148.7 80 86.2
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 4.9e-34 147.5 83 84.3
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 4.9e-34 147.5 83 84.3
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 6.4e-34 147.1 91 80.2
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 3.2e-33 144.8 89 78.7
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 3.2e-33 144.8 89 78.7
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 5.4e-33 144.1 83 83.1
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 5.4e-33 144.1 83 83.1
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 5.4e-33 144.1 83 83.1
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 7.0e-33 143.7 90 78.9
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 7.0e-33 143.7 76 90.8
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 2.1e-32 142.1 88 78.4
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 3.5e-32 141.4 81 84.0
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.0e-31 139.8 76 86.8
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.0e-31 139.8 76 86.8
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 2.3e-31 138.7 79 78.5
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.0e-31 138.3 76 86.8
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 6.6e-31 137.1 81 81.5
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 8.1e-29 130.2 60 98.3
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.1e-29 130.2 73 86.3
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 1.8e-28 129.0 88 72.7
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.1e-28 128.3 90 71.1
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.0e-28 127.9 71 85.9
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 4.0e-28 127.9 57 98.2
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 6.8e-28 127.1 65 93.8
BcaNung01516 Brassica carinata HOM05D000963 ORTHO05D004715 4.9e-26 120.9 74 75.7
VMungo0331G0858 Vigna mungo HOM05D000963 ORTHO05D004715 1.4e-25 119.4 69 79.7
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 4.1e-25 117.9 84 72.6
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 5.4e-25 117.5 90 67.8
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 2.1e-24 115.5 66 84.8
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 2.1e-24 115.5 66 84.8
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 3.0e-23 111.7 60 90.0
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 3.0e-23 111.7 53 92.5
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 4.3e-22 107.8 49 95.9
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 4.0e-20 101.3 45 95.6
DCAR_017253 Daucus carota HOM05D000963 ORTHO05D004715 1.5e-19 99.4 58 82.8
TPR.G27622 Trifolium pratense HOM05D000963 ORTHO05D004715 2.0e-19 99.0 46 93.5
Gohir.A01G139250 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.6e-19 98.6 46 95.7
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 3.4e-19 98.2 43 95.3
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 6.4e-18 94.0 55 78.2
Medtr1g105230 Medicago truncatula HOM05D000963 ORTHO05D004715 5.4e-17 90.9 42 92.9
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 9.2e-17 90.1 58 79.3
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 3.5e-16 88.2 84 57.1
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 7.8e-16 87.0 40 97.5
CAN.G1594.2 Capsicum annuum HOM05D016096 ORTHO05D016167 1.1e-14 83.2 42 90.5
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.1e-14 83.2 48 85.4
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 2.5e-14 82.0 50 84.0
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 5.6e-14 80.9 40 95.0
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 5.6e-14 80.9 40 95.0
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 1.6e-13 79.3 74 59.5
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.1e-12 76.6 50 80.0
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 3.1e-12 75.1 51 80.4
Gorai.002G200300 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.2e-11 73.2 35 88.6
Sc21g0003630 Simmondsia chinensis HOM05D000556 ORTHO05D000404 5.4e-09 64.3 46 71.7
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 7.1e-09 63.9 36 86.1
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.1e-08 62.4 38 81.6
Oeu033793.1 Olea europaea HOM05D001982 ORTHO05D003938 3.3e-06 55.1 38 73.7
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 3.3e-06 55.1 38 71.1
arahy.Tifrunner.gnm1.ann1.QZA5BL Arachis hypogaea HOM05D000963 ORTHO05D004715 4.3e-06 54.7 47 61.7


User provided reference genes

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