Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RRY0UC Arachis hypogaea HOM05D000999 ORTHO05D000961 1.3e-22 109.4 79 100.0
arahy.Tifrunner.gnm1.ann1.FQH85A Arachis hypogaea HOM05D000999 ORTHO05D000961 1.7e-19 99.0 79 96.2
arahy.Tifrunner.gnm1.ann1.9BP30P Arachis hypogaea HOM05D000999 ORTHO05D000961 2.1e-12 75.5 77 54.5
arahy.Tifrunner.gnm1.ann1.T4CT7H Arachis hypogaea HOM05D000999 ORTHO05D000961 2.1e-12 75.5 77 54.5
Lj4g0026251 Lotus japonicus HOM05D000999 ORTHO05D000961 3.5e-12 74.7 77 54.5
Medtr8g103820 Medicago truncatula HOM05D000999 ORTHO05D000961 6.0e-12 73.9 77 57.1
Lalb_Chr05g0222671 Lupinus albus HOM05D000999 ORTHO05D000961 7.9e-12 73.6 77 53.2
Lalb_Chr22g0352951 Lupinus albus HOM05D000999 ORTHO05D000961 1.8e-11 72.4 77 54.5
Glyma.05G232300 Glycine max HOM05D000999 ORTHO05D000961 3.9e-11 71.2 77 54.5
Glyma.07G088600 Glycine max HOM05D000999 ORTHO05D000961 6.7e-11 70.5 77 51.9
Medtr6g086020 Medicago truncatula HOM05D000999 ORTHO05D000961 6.7e-11 70.5 77 51.9
Phvul.004G161300 Phaseolus vulgaris HOM05D000999 ORTHO05D000961 6.7e-11 70.5 77 53.2
Lalb_Chr16g0387991 Lupinus albus HOM05D000999 ORTHO05D000961 2.5e-10 68.6 77 51.9
Glyma.09G188200 Glycine max HOM05D000999 ORTHO05D000961 3.3e-10 68.2 77 50.6
TPR.G21677 Trifolium pratense HOM05D004428 ORTHO05D006381 5.6e-10 67.4 72 55.6
Glyma.08G039700 Glycine max HOM05D000999 ORTHO05D000961 1.3e-09 66.2 77 51.9
VMungo0464G1073 Vigna mungo HOM05D000999 ORTHO05D000961 1.3e-09 66.2 77 50.6
TPR.G31448 Trifolium pratense HOM05D000999 ORTHO05D000961 3.7e-09 64.7 77 48.1
Lj2g0015057 Lotus japonicus HOM05D000999 ORTHO05D000961 1.1e-08 63.2 77 48.1
Phvul.002G314600 Phaseolus vulgaris HOM05D000999 ORTHO05D000961 1.8e-08 62.4 77 49.4
VMungo0251G0089 Vigna mungo HOM05D000999 ORTHO05D000961 1.8e-08 62.4 77 50.6
QL02p085919 Quercus lobata HOM05D000999 ORTHO05D000961 2.4e-08 62.0 79 50.6
GSVIVG01015420001 Vitis vinifera HOM05D000999 ORTHO05D000961 1.2e-07 59.7 79 48.1
Atru.chr7.1310 Acer truncatum HOM05D000999 ORTHO05D000961 2.6e-07 58.5 79 50.6
Cfa003284 Carpinus fangiana HOM05D000999 ORTHO05D000961 3.4e-07 58.2 79 48.1
Psat1g039800 Pisum sativum HOM05D000999 ORTHO05D000961 3.4e-07 58.2 77 46.8
Prupe.7G227800 Prunus persica HOM05D000999 ORTHO05D000961 4.5e-07 57.8 79 46.8
FvH4_1g05260 Fragaria vesca HOM05D000999 ORTHO05D000961 5.8e-07 57.4 79 48.1
FAN19G1847 Fragaria x ananassa HOM05D000999 ORTHO05D000961 5.8e-07 57.4 79 48.1
Gohir.D07G004200 Gossypium hirsutum HOM05D000999 ORTHO05D000961 5.8e-07 57.4 79 49.4
Gorai.001G003800 Gossypium raimondii HOM05D000999 ORTHO05D000961 5.8e-07 57.4 79 49.4
Duzib150G0517 Durio zibethinus HOM05D000999 ORTHO05D000961 9.9e-07 56.6 79 49.4
FAN23G2781 Fragaria x ananassa HOM05D000999 ORTHO05D000961 9.9e-07 56.6 79 46.8
Haze_25689 Corylus avellana HOM05D000999 ORTHO05D000961 1.3e-06 56.2 79 46.8
MD15G1188800 Malus domestica HOM05D000999 ORTHO05D000961 1.3e-06 56.2 79 45.6
FAN28G0318 Fragaria x ananassa HOM05D000999 ORTHO05D000961 2.2e-06 55.5 79 46.8
Potri.018G076400 Populus trichocarpa HOM05D000999 ORTHO05D000961 2.9e-06 55.1 79 45.6
Actinidia20343 Actinidia chinensis HOM05D000999 ORTHO05D000961 4.9e-06 54.3 79 43.0
Ciclev10009855m.g Citrus clementina HOM05D000999 ORTHO05D000961 4.9e-06 54.3 74 45.9
Dinv41582 Davidia involucrata HOM05D000999 ORTHO05D000961 4.9e-06 54.3 79 44.3
MD02G1063000 Malus domestica HOM05D000999 ORTHO05D000961 6.4e-06 53.9 79 45.6
Oeu000379.1 Olea europaea HOM05D000999 ORTHO05D000961 6.4e-06 53.9 81 51.9


User provided reference genes

Program Settings