Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RMWQ71 Arachis hypogaea HOM05D000555 ORTHO05D000646 2.9e-61 238.4 125 100.0
arahy.Tifrunner.gnm1.ann1.JQ5BKF Arachis hypogaea HOM05D000555 ORTHO05D000646 1.1e-55 219.9 124 93.5
arahy.Tifrunner.gnm1.ann1.N7HAGI Arachis hypogaea HOM05D000555 ORTHO05D000646 1.5e-44 183.0 108 88.9
arahy.Tifrunner.gnm1.ann1.SC583Y Arachis hypogaea HOM05D000555 ORTHO05D000646 3.2e-44 181.8 119 81.5
Lj3g0003571 Lotus japonicus HOM05D000555 ORTHO05D000646 1.4e-15 86.7 99 53.5
Lj3g0024067 Lotus japonicus HOM05D000555 ORTHO05D000646 9.2e-15 84.0 99 52.5
Lalb_Chr25g0278901 Lupinus albus HOM05D000555 ORTHO05D000646 1.2e-14 83.6 100 54.0
Lj3g0004040 Lotus japonicus HOM05D000555 ORTHO05D000646 6.0e-14 81.3 99 51.5
Phvul.010G160600 Phaseolus vulgaris HOM05D000555 ORTHO05D000646 1.3e-13 80.1 108 49.1
TPR.G38768 Trifolium pratense HOM05D000555 ORTHO05D000646 1.1e-12 77.0 109 45.0
Lalb_Chr04g0264431 Lupinus albus HOM05D000555 ORTHO05D000646 9.5e-12 73.9 108 46.3
Medtr4g030130 Medicago truncatula HOM05D000555 ORTHO05D000646 9.5e-12 73.9 95 48.4
Medtr4g006875 Medicago truncatula HOM05D000555 ORTHO05D000646 3.6e-11 72.0 109 44.0
Glyma.08G217800 Glycine max HOM05D000555 ORTHO05D000646 4.7e-11 71.6 100 44.0
Psat7g259440 Pisum sativum HOM05D000555 ORTHO05D000646 8.1e-11 70.9 98 45.9
VMungo0331G1930 Vigna mungo HOM05D000555 ORTHO05D000646 4.0e-10 68.6 56 64.3
ClCG09G003300 Citrullus lanatus HOM05D000555 ORTHO05D000646 5.2e-10 68.2 100 38.0
MELO3C023464.2 Cucumis melo HOM05D000555 ORTHO05D000646 2.0e-09 66.2 100 38.0
CiPaw.01G254100 Carya illinoinensis HOM05D000555 ORTHO05D000646 5.8e-09 64.7 97 40.2
Dinv21407 Davidia involucrata HOM05D000555 ORTHO05D000646 7.5e-09 64.3 103 39.8
CSS0031647 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D000646 1.7e-08 63.2 98 40.8
DCAR_016300 Daucus carota HOM05D000555 ORTHO05D000646 2.2e-08 62.8 99 40.4
FvH4_6g28720 Fragaria vesca HOM05D000555 ORTHO05D000646 3.7e-08 62.0 92 42.4
FAN14G0157 Fragaria x ananassa HOM05D000555 ORTHO05D000646 3.7e-08 62.0 92 42.4
Sc09g0010540 Simmondsia chinensis HOM05D000555 ORTHO05D000646 3.7e-08 62.0 98 40.8
AUR62026992 Chenopodium quinoa HOM05D000555 ORTHO05D000646 6.4e-08 61.2 96 39.6
FAN05G2625 Fragaria x ananassa HOM05D000555 ORTHO05D000646 8.3e-08 60.8 92 42.4
FAN09G3803 Fragaria x ananassa HOM05D000555 ORTHO05D000646 8.3e-08 60.8 92 42.4
QL04p064377 Quercus lobata HOM05D000013 ORTHO05D000646 8.3e-08 60.8 112 34.8
QL05p035479 Quercus lobata HOM05D000555 ORTHO05D000646 8.3e-08 60.8 97 38.1
Potri.003G181300 Populus trichocarpa HOM05D000555 ORTHO05D000646 1.1e-07 60.5 97 38.1
Lalb_Chr23g0268251 Lupinus albus HOM05D000555 ORTHO05D000646 1.4e-07 60.1 107 37.4
PSO339G4429 Papaver somniferum HOM05D000555 ORTHO05D000646 1.4e-07 60.1 85 42.4
Psat7g259280 Pisum sativum HOM05D000555 ORTHO05D000646 1.4e-07 60.1 96 42.7
CsaV3_7G031920 Cucumis sativus L. HOM05D000555 ORTHO05D000646 1.9e-07 59.7 100 35.0
DCAR_021367 Daucus carota HOM05D000555 ORTHO05D000646 1.9e-07 59.7 48 60.4
Manes.04G103300 Manihot esculenta HOM05D000555 ORTHO05D000646 1.9e-07 59.7 99 39.4
Potri.001G046500 Populus trichocarpa HOM05D000555 ORTHO05D000646 1.9e-07 59.7 91 40.7
QL12p018079 Quercus lobata HOM05D000555 ORTHO05D000646 1.9e-07 59.7 96 36.5
Ah.16g104990 Amaranthus hybridus HOM05D000555 ORTHO05D000646 2.4e-07 59.3 99 39.4
CSS0042939 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D000646 2.4e-07 59.3 98 38.8
AUR62030832 Chenopodium quinoa HOM05D000555 ORTHO05D000646 2.4e-07 59.3 88 40.9
PSO384G0838 Papaver somniferum HOM05D000555 ORTHO05D000646 2.4e-07 59.3 85 42.4
Sabra01G0031900 Salix brachista HOM05D000555 ORTHO05D000646 2.4e-07 59.3 97 39.2
Sed0023061 Sechium edule HOM05D000555 ORTHO05D000646 2.4e-07 59.3 97 39.2
Lalb_Chr11g0063521 Lupinus albus HOM05D000555 ORTHO05D000646 3.2e-07 58.9 48 60.4
CAN.G407.60 Capsicum annuum HOM05D000555 ORTHO05D000646 4.1e-07 58.5 84 39.3
Prupe.3G097300 Prunus persica HOM05D000555 ORTHO05D000646 4.1e-07 58.5 98 39.8
TAR636G1427 Trochodendron aralioides HOM05D000555 ORTHO05D000646 4.1e-07 58.5 97 39.2
AUR62012473 Chenopodium quinoa HOM05D000555 ORTHO05D000646 5.4e-07 58.2 50 58.0
AUR62031599 Chenopodium quinoa HOM05D000555 ORTHO05D000646 5.4e-07 58.2 50 58.0
FAN02G1211 Fragaria x ananassa HOM05D000555 ORTHO05D000646 5.4e-07 58.2 92 41.3
Thecc.06G040400 Theobroma cacao HOM05D000555 ORTHO05D000646 5.4e-07 58.2 90 43.3
VMungo1309G2547 Vigna mungo HOM05D000555 ORTHO05D000646 5.4e-07 58.2 57 50.9
Ciclev10024823m.g Citrus clementina HOM05D000555 ORTHO05D000646 7.1e-07 57.8 97 37.1
Glyma.06G062800 Glycine max HOM05D000555 ORTHO05D000646 7.1e-07 57.8 90 42.2
TPR.G38846 Trifolium pratense HOM05D000555 ORTHO05D000646 7.1e-07 57.8 49 51.0
CSS0015850 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D000646 9.2e-07 57.4 98 37.8
CsaV3_2G032450 Cucumis sativus L. HOM05D000555 ORTHO05D000646 9.2e-07 57.4 93 40.9
Oeu012645.2 Olea europaea HOM05D000555 ORTHO05D000646 9.2e-07 57.4 72 45.8
Phvul.009G088000 Phaseolus vulgaris HOM05D000555 ORTHO05D000646 9.2e-07 57.4 49 55.1
QL04p037144 Quercus lobata HOM05D000555 ORTHO05D000646 9.2e-07 57.4 97 36.1
RcHm_v2.0_Chr2g0133121 Rosa chinensis HOM05D000555 ORTHO05D000646 9.2e-07 57.4 92 40.2
Sabra03G0132700 Salix brachista HOM05D000555 ORTHO05D000646 9.2e-07 57.4 57 49.1
Sed0013932 Sechium edule HOM05D000555 ORTHO05D000646 9.2e-07 57.4 97 33.0
TAR365G1219 Trochodendron aralioides HOM05D000555 ORTHO05D000646 9.2e-07 57.4 97 37.1
TAR383G0993 Trochodendron aralioides HOM05D000555 ORTHO05D000646 9.2e-07 57.4 97 37.1
Hma1.2p1_0059F.1_g032630 Hydrangea macrophylla HOM05D000555 ORTHO05D000646 1.2e-06 57.0 49 57.1
MD17G1222300 Malus domestica HOM05D000555 ORTHO05D000646 1.2e-06 57.0 52 53.8
Oeu056786.1 Olea europaea HOM05D000555 ORTHO05D000646 1.2e-06 57.0 92 41.3
Phvul.009G087800 Phaseolus vulgaris HOM05D000555 ORTHO05D000646 1.2e-06 57.0 93 39.8
Hund00438 Selenicereus undatus HOM05D000555 ORTHO05D000646 1.2e-06 57.0 92 38.0
Sc23g0006420 Simmondsia chinensis HOM05D000555 ORTHO05D000646 1.2e-06 57.0 97 38.1
ClCG08G013680 Citrullus lanatus HOM05D000555 ORTHO05D000646 1.6e-06 56.6 97 35.1
MELO3C011294.2 Cucumis melo HOM05D000555 ORTHO05D000646 1.6e-06 56.6 97 36.1
Nn2g12328 Nelumbo nucifera HOM05D000555 ORTHO05D000646 1.6e-06 56.6 92 40.2
Rhsim02G0215700 Rhododendron simsii HOM05D000555 ORTHO05D000646 1.6e-06 56.6 98 37.8
CAN.G199.62 Capsicum annuum HOM05D000555 ORTHO05D000646 2.1e-06 56.2 97 36.1
Duzib187G0516 Durio zibethinus HOM05D000555 ORTHO05D000646 2.1e-06 56.2 90 40.0
Duzib192G0111 Durio zibethinus HOM05D000555 ORTHO05D000646 2.1e-06 56.2 92 38.0
Eucgr.C02662 Eucalyptus grandis HOM05D000555 ORTHO05D000646 2.1e-06 56.2 99 34.3
Glyma.04G061700 Glycine max HOM05D000555 ORTHO05D000646 2.1e-06 56.2 49 55.1
Lj5g0020314 Lotus japonicus HOM05D000555 ORTHO05D000646 2.1e-06 56.2 98 37.8
QL06p006644 Quercus lobata HOM05D000205 ORTHO05D000438 2.1e-06 56.2 92 38.0
QL07p048642 Quercus lobata HOM05D000555 ORTHO05D000646 2.1e-06 56.2 96 35.4
Rhsim08G0206600 Rhododendron simsii HOM05D000555 ORTHO05D000646 2.1e-06 56.2 87 42.5
Rhsim08G0207000 Rhododendron simsii HOM05D000555 ORTHO05D000646 2.1e-06 56.2 87 42.5
TAR626G1146 Trochodendron aralioides HOM05D000555 ORTHO05D000646 2.1e-06 56.2 97 38.1
CiPaw.02G161700 Carya illinoinensis HOM05D000555 ORTHO05D000646 2.7e-06 55.8 53 49.1
Cc09_g06560 Coffea canephora HOM05D000555 ORTHO05D000646 2.7e-06 55.8 104 40.4
Glyma.06G062700 Glycine max HOM05D000555 ORTHO05D000646 2.7e-06 55.8 49 53.1
Peaxi162Scf00632g00022 Petunia axillaris HOM05D000555 ORTHO05D000646 2.7e-06 55.8 92 38.0
Atru.chr7.2535 Acer truncatum HOM05D000555 ORTHO05D000646 3.5e-06 55.5 87 37.9
Dinv34973 Davidia involucrata HOM05D000555 ORTHO05D000646 3.5e-06 55.5 93 37.6
Lj9C494G11 Lonicera japonica HOM05D000555 ORTHO05D000646 3.5e-06 55.5 83 39.8
QL03p012098 Quercus lobata HOM05D000555 ORTHO05D000646 3.5e-06 55.5 92 35.9
Sed0023696 Sechium edule HOM05D000555 ORTHO05D000646 3.5e-06 55.5 97 34.0
Sopen02g037420 Solanum pennellii HOM05D000555 ORTHO05D000646 3.5e-06 55.5 100 37.0
SGA_v2.0_scaffold64G22020 Striga asiatica HOM05D000555 ORTHO05D000646 3.5e-06 55.5 99 34.3
TWI18G1175 Tripterygium wilfordii HOM05D000555 ORTHO05D000646 3.5e-06 55.5 92 35.9
vmacro19048 Vaccinium macrocarpon HOM05D000555 ORTHO05D000646 3.5e-06 55.5 104 37.5
arahy.Tifrunner.gnm1.ann1.QZG3GX Arachis hypogaea HOM05D000555 ORTHO05D000646 4.6e-06 55.1 97 37.1
COL.COLO4_26681 Corchorus olitorius HOM05D000555 ORTHO05D000646 4.6e-06 55.1 92 40.2
FvH4_2g41000 Fragaria vesca HOM05D000555 ORTHO05D000646 4.6e-06 55.1 97 35.1
FAN15G2747 Fragaria x ananassa HOM05D000555 ORTHO05D000646 4.6e-06 55.1 97 35.1
FAN27G3064 Fragaria x ananassa HOM05D000555 ORTHO05D000646 4.6e-06 55.1 97 35.1
THA.LOC104812429 Tarenaya hassleriana HOM05D000555 ORTHO05D000646 4.6e-06 55.1 97 38.1
arahy.Tifrunner.gnm1.ann1.I3ML28 Arachis hypogaea HOM05D000555 ORTHO05D000646 6.0e-06 54.7 97 37.1
Carub.0001s1574 Capsella rubella HOM05D000555 ORTHO05D000646 6.0e-06 54.7 61 42.6
Haze_21428 Corylus avellana HOM05D000555 ORTHO05D000646 6.0e-06 54.7 49 53.1
Glyma.04G061800 Glycine max HOM05D000555 ORTHO05D000646 6.0e-06 54.7 90 40.0
Lsat_1_v5_gn_4_87100 Lactuca sativa HOM05D000555 ORTHO05D000646 6.0e-06 54.7 50 54.0
Rhsim02G0215600 Rhododendron simsii HOM05D000555 ORTHO05D000646 6.0e-06 54.7 49 55.1
Hund19590 Selenicereus undatus HOM05D000555 ORTHO05D000646 6.0e-06 54.7 99 38.4
EL10Ac2g04122 Beta vulgaris HOM05D000555 ORTHO05D000646 7.8e-06 54.3 99 36.4
DCAR_025574 Daucus carota HOM05D000555 ORTHO05D000646 7.8e-06 54.3 100 37.0
FAN20G0988 Fragaria x ananassa HOM05D000555 ORTHO05D000646 7.8e-06 54.3 53 49.1
Nn8g39837 Nelumbo nucifera HOM05D000555 ORTHO05D000646 7.8e-06 54.3 59 47.5
PSO063G5050 Papaver somniferum HOM05D000555 ORTHO05D000646 7.8e-06 54.3 90 35.6
TWI53G0810 Tripterygium wilfordii HOM05D000555 ORTHO05D000646 7.8e-06 54.3 89 34.8
vmacro05129 Vaccinium macrocarpon HOM05D000555 ORTHO05D000646 7.8e-06 54.3 49 55.1


User provided reference genes

Program Settings