Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7P25LN Arachis hypogaea HOM05D005924 ORTHO05D007290 2.6e-74 282.0 142 100.0
arahy.Tifrunner.gnm1.ann1.RJW0MD Arachis hypogaea HOM05D005924 ORTHO05D007290 2.6e-74 282.0 142 100.0
Phvul.008G278700 Phaseolus vulgaris HOM05D005924 ORTHO05D007290 9.3e-56 220.3 143 80.4
Ca_06392_v3 Cicer arietinum L. HOM05D005924 ORTHO05D007290 3.6e-55 218.4 144 78.5
VMungo0647G1823 Vigna mungo HOM05D005924 ORTHO05D007290 9.7e-53 210.3 143 78.3
Glyma.02G300000 Glycine max HOM05D005924 ORTHO05D007290 4.8e-52 208.0 138 79.0
Medtr5g095700 Medicago truncatula HOM05D005924 ORTHO05D007290 8.2e-52 207.2 145 75.9
Lalb_Chr04g0247881 Lupinus albus HOM05D005924 ORTHO05D007290 6.9e-51 204.1 144 75.0
Psat2g007680 Pisum sativum HOM05D000001 ORTHO05D000003 2.0e-50 202.6 144 75.7
Glyma.14G013900 Glycine max HOM05D005924 ORTHO05D007290 4.5e-50 201.4 143 75.5
Lj6g0020710 Lotus japonicus HOM05D005924 ORTHO05D007290 7.7e-50 200.7 141 77.3
COL.COLO4_09820 Corchorus olitorius HOM05D005924 ORTHO05D007290 6.5e-49 197.6 142 70.4
TPR.G8617 Trifolium pratense HOM05D005924 ORTHO05D007290 5.5e-48 194.5 146 74.0
QL11p054318 Quercus lobata HOM05D005924 ORTHO05D007290 7.2e-48 194.1 142 71.8
Duzib213G0633 Durio zibethinus HOM05D005924 ORTHO05D007290 9.4e-48 193.7 141 68.1
QL08p004337 Quercus lobata HOM05D005924 ORTHO05D007290 1.6e-47 193.0 142 71.1
CSS0023895 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 6.1e-47 191.0 142 69.0
Cfa020200 Carpinus fangiana HOM05D005924 ORTHO05D007290 3.9e-46 188.3 143 71.3
Haze_09815 Corylus avellana HOM05D005924 ORTHO05D007290 6.7e-46 187.6 143 71.3
Ciclev10009817m.g Citrus clementina HOM05D005924 ORTHO05D007290 2.6e-45 185.7 143 72.0
Sed0014433 Sechium edule HOM05D005924 ORTHO05D007290 2.6e-45 185.7 141 69.5
CiPaw.12G137600 Carya illinoinensis HOM05D005924 ORTHO05D007290 5.7e-45 184.5 142 70.4
SGA_v2.0_scaffold8G04406 Striga asiatica HOM05D005924 ORTHO05D007290 5.7e-45 184.5 143 67.8
CSS0025987 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 9.7e-45 183.7 145 67.6
CSS0049690 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 9.7e-45 183.7 145 67.6
TWI38G0037 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 1.3e-44 183.3 147 66.0
Gohir.D05G383300 Gossypium hirsutum HOM05D005924 ORTHO05D007290 2.8e-44 182.2 142 65.5
Prupe.4G242300 Prunus persica HOM05D005924 ORTHO05D007290 2.8e-44 182.2 143 69.2
Gohir.A04G006200 Gossypium hirsutum HOM05D005924 ORTHO05D007290 3.7e-44 181.8 142 64.8
Thecc.07G014800 Theobroma cacao HOM05D005924 ORTHO05D007290 3.7e-44 181.8 141 63.8
MD11G1201100 Malus domestica HOM05D005924 ORTHO05D007290 6.3e-44 181.0 142 68.3
Actinidia30411 Actinidia chinensis HOM05D005924 ORTHO05D007290 8.2e-44 180.6 142 63.4
Dinv40851 Davidia involucrata HOM05D005924 ORTHO05D007290 1.1e-43 180.3 144 67.4
Manes.15G060600 Manihot esculenta HOM05D005924 ORTHO05D007290 1.1e-43 180.3 143 66.4
Dinv10325 Davidia involucrata HOM05D005924 ORTHO05D007290 1.4e-43 179.9 146 69.2
ClCG09G021250 Citrullus lanatus HOM05D005924 ORTHO05D007290 1.8e-43 179.5 141 68.1
Sabra16G0240500 Salix brachista HOM05D005924 ORTHO05D007290 1.8e-43 179.5 144 67.4
GSVIVG01014668001 Vitis vinifera HOM05D005924 ORTHO05D007290 1.8e-43 179.5 142 69.7
MD03G1184300 Malus domestica HOM05D005924 ORTHO05D007290 2.4e-43 179.1 142 64.8
Hma1.2p1_0036F.1_g022440 Hydrangea macrophylla HOM05D005924 ORTHO05D007290 4.1e-43 178.3 143 67.8
RcHm_v2.0_Chr5g0053761 Rosa chinensis HOM05D005924 ORTHO05D007290 5.3e-43 177.9 146 65.1
TWI39G1162 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 6.9e-43 177.6 146 65.1
CiPaw.11G203100 Carya illinoinensis HOM05D005924 ORTHO05D007290 9.1e-43 177.2 141 67.4
CsaV3_7G015090 Cucumis sativus L. HOM05D005924 ORTHO05D007290 1.5e-42 176.4 141 66.7
FvH4_3g29370 Fragaria vesca HOM05D005924 ORTHO05D007290 4.5e-42 174.9 143 63.6
FAN11G0697 Fragaria x ananassa HOM05D005924 ORTHO05D007290 4.5e-42 174.9 143 63.6
ECA246G3128 Erigeron canadensis HOM05D005924 ORTHO05D007290 1.3e-41 173.3 144 64.6
Potri.001G367200 Populus trichocarpa HOM05D005924 ORTHO05D007290 1.3e-41 173.3 144 66.0
TAR629G1982 Trochodendron aralioides HOM05D001060 ORTHO05D000905 1.7e-41 172.9 143 66.4
Lj8A178T78 Lonicera japonica HOM05D005924 ORTHO05D007290 2.2e-41 172.6 127 71.7
FAN21G3132 Fragaria x ananassa HOM05D005924 ORTHO05D007290 2.9e-41 172.2 143 62.2
FAN25G0770 Fragaria x ananassa HOM05D005924 ORTHO05D007290 5.0e-41 171.4 142 63.4
Rhsim04G0012900 Rhododendron simsii HOM05D005924 ORTHO05D007290 5.0e-41 171.4 142 62.7
Actinidia26779 Actinidia chinensis HOM05D005924 ORTHO05D007290 2.5e-40 169.1 142 64.1
Nn1g03196 Nelumbo nucifera HOM05D005924 ORTHO05D007290 2.5e-40 169.1 144 64.6
Cpa.g.sc12.154 Carica papaya HOM05D005924 ORTHO05D007290 3.2e-40 168.7 123 71.5
Cc05_g14880 Coffea canephora HOM05D005924 ORTHO05D007290 7.2e-40 167.5 142 63.4
MELO3C024930.2 Cucumis melo HOM05D005924 ORTHO05D007290 7.2e-40 167.5 141 63.8
Gorai.009G449900 Gossypium raimondii HOM05D005924 ORTHO05D007290 1.6e-39 166.4 175 53.1
Oeu057095.1 Olea europaea HOM05D005924 ORTHO05D007290 1.6e-39 166.4 129 68.2
vmacro09651 Vaccinium macrocarpon HOM05D005924 ORTHO05D007290 3.6e-39 165.2 146 63.7
CANSAT11G0122 Cannabis sativa HOM05D005924 ORTHO05D007290 4.7e-39 164.9 150 64.0
AUR62036442 Chenopodium quinoa HOM05D005924 ORTHO05D007290 7.9e-39 164.1 144 64.6
Sed0006731 Sechium edule HOM05D005924 ORTHO05D007290 7.9e-39 164.1 141 61.7
Eucgr.F02053 Eucalyptus grandis HOM05D005924 ORTHO05D007290 1.0e-38 163.7 144 62.5
Hund23125 Selenicereus undatus HOM05D005924 ORTHO05D007290 1.0e-38 163.7 142 62.7
ATR0624G098 Amborella trichopoda HOM05D005924 ORTHO05D007290 2.3e-38 162.5 143 62.2
MSTRG.13019 Avicennia marina HOM05D005924 ORTHO05D007290 3.0e-38 162.2 144 61.1
Migut.H01759 Erythranthe guttata HOM05D005924 ORTHO05D007290 3.0e-38 162.2 144 61.1
AUR62036411 Chenopodium quinoa HOM05D005924 ORTHO05D007290 3.9e-38 161.8 144 64.6
Oeu049375.1 Olea europaea HOM05D005924 ORTHO05D007290 3.9e-38 161.8 142 63.4
EL10Ac4g07594 Beta vulgaris HOM05D005924 ORTHO05D007290 1.1e-37 160.2 143 64.3
AUR62017085 Chenopodium quinoa HOM05D005924 ORTHO05D007290 4.4e-37 158.3 144 63.9
Aqoxy1G04252 Aquilegia oxysepala HOM05D005924 ORTHO05D007290 7.4e-37 157.5 143 60.1
HanXRQChr08g0231191 Helianthus annuus HOM05D005924 ORTHO05D007290 7.4e-37 157.5 132 61.4
Oeu049390.1 Olea europaea HOM05D005924 ORTHO05D007290 7.4e-37 157.5 124 67.7
Lsat_1_v5_gn_5_1420 Lactuca sativa HOM05D005924 ORTHO05D007290 9.7e-37 157.1 146 60.3
PGSC0003DMG400022173 Solanum tuberosum HOM05D005924 ORTHO05D007290 1.3e-36 156.8 143 63.6
MBI16_g07767_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 1.7e-36 156.4 123 65.9
unitig_0.g996 Utricularia gibba HOM05D005924 ORTHO05D007290 1.7e-36 156.4 142 57.7
Actinidia37157 Actinidia chinensis HOM05D005924 ORTHO05D007290 2.2e-36 156.0 123 66.7
DCAR_018844 Daucus carota HOM05D005924 ORTHO05D007290 2.2e-36 156.0 130 60.8
Peaxi162Scf01164g00127 Petunia axillaris HOM05D005924 ORTHO05D007290 6.3e-36 154.5 130 65.4
CDE10G1040 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 8.2e-36 154.1 142 62.7
Sp6g17560 Schrenkiella parvula HOM05D005924 ORTHO05D007290 8.2e-36 154.1 139 60.4
AT5G55640 Arabidopsis thaliana HOM05D005924 ORTHO05D007290 1.4e-35 153.3 146 58.9
Nitab4.5_0014607g0010 Nicotiana tabacum HOM05D005924 ORTHO05D007290 1.4e-35 153.3 145 60.0
PGR083G1797 Punica granatum HOM05D005924 ORTHO05D007290 1.4e-35 153.3 147 59.9
arahy.Tifrunner.gnm1.ann1.HJ67LJ Arachis hypogaea HOM05D005924 ORTHO05D007290 2.4e-35 152.5 97 84.5
Thhalv10014966m.g Eutrema salsugineum HOM05D005924 ORTHO05D007290 4.1e-35 151.8 144 59.0
Nitab4.5_0000461g0270 Nicotiana tabacum HOM05D005924 ORTHO05D007290 4.1e-35 151.8 145 60.0
Solyc07g065480.3 Solanum lycopersicum HOM05D005924 ORTHO05D007290 5.3e-35 151.4 143 62.2
MBI19_g12833_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 7.0e-35 151.0 131 64.1
Sopen07g033690 Solanum pennellii HOM05D005924 ORTHO05D007290 9.1e-35 150.6 143 62.2
Sc16g0008020 Simmondsia chinensis HOM05D005924 ORTHO05D007290 1.3e-33 146.7 143 60.1
Carub.0008s1601 Capsella rubella HOM05D005924 ORTHO05D007290 1.7e-33 146.4 146 58.2
PSO302G0279 Papaver somniferum HOM05D005924 ORTHO05D007290 2.2e-33 146.0 144 57.6
PSO210G6324 Papaver somniferum HOM05D005924 ORTHO05D007290 1.1e-32 143.7 144 56.9
CDE10G1343 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 1.9e-32 142.9 137 56.9
Atru.BG.148.p Acer truncatum HOM05D005924 ORTHO05D007290 7.2e-32 141.0 91 78.0
THA.LOC104811656 Tarenaya hassleriana HOM05D005924 ORTHO05D007290 1.6e-31 139.8 146 56.8
AL8G31220 Arabidopsis lyrata HOM05D005924 ORTHO05D007290 1.8e-30 136.3 143 55.2
BolC9t57514H Brassica oleracea HOM05D005924 ORTHO05D007290 2.3e-30 136.0 135 57.0
Ah.06g181380 Amaranthus hybridus HOM05D000864 ORTHO05D002353 3.0e-30 135.6 122 57.4
BcaC04g20212 Brassica carinata HOM05D005924 ORTHO05D007290 8.8e-30 134.0 135 57.0
C09p46620 Brassica napus HOM05D005924 ORTHO05D007290 8.8e-30 134.0 135 57.0
BcaB08g35925 Brassica carinata HOM05D005924 ORTHO05D007290 3.3e-29 132.1 125 59.2
SEGI_16066 Sequoiadendron giganteum HOM05D005924 ORTHO05D007290 3.3e-29 132.1 145 53.1
CARHR268960 Cardamine hirsuta HOM05D005924 ORTHO05D007290 9.7e-29 130.6 126 60.3
BraA10t43385Z Brassica rapa HOM05D005924 ORTHO05D007290 4.8e-28 128.3 134 54.5
Aa31LG3G11590 Aethionema arabicum HOM05D005924 ORTHO05D007290 1.4e-27 126.7 154 50.0
A10p12930 Brassica napus HOM05D005924 ORTHO05D007290 1.8e-27 126.3 134 54.5
Os03g0595200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 1.6e-26 123.2 122 52.5
Manes.03G140800 Manihot esculenta HOM05D005924 ORTHO05D007290 3.5e-26 122.1 116 62.1
QL08p004311 Quercus lobata HOM05D005924 ORTHO05D007290 5.0e-25 118.2 121 56.2
C09p47070 Brassica napus HOM05D005924 ORTHO05D007290 2.5e-24 115.9 122 53.3
Pp3c6_3770 Physcomitrium patens HOM05D005924 ORTHO05D007290 3.2e-24 115.5 137 48.9
Zm00001eb049780 Zea mays HOM05D005924 ORTHO05D007290 5.5e-24 114.8 136 45.6
HPP92_006039 Vanilla planifolia HOM05D005924 ORTHO05D007290 2.1e-23 112.8 86 66.3
BcaC04g20171 Brassica carinata HOM05D005924 ORTHO05D007290 4.7e-23 111.7 91 63.7
Pp3c5_24890 Physcomitrium patens HOM05D005924 ORTHO05D007290 6.1e-23 111.3 131 46.6
Mapoly0038s0106 Marchantia polymorpha HOM05D005924 ORTHO05D007290 1.0e-22 110.5 136 50.0
TAR626G0711 Trochodendron aralioides HOM05D005924 ORTHO05D007290 1.8e-22 109.8 128 54.7
arahy.Tifrunner.gnm1.ann1.7WZH36 Arachis hypogaea HOM05D005924 ORTHO05D007290 5.5e-16 88.2 55 78.2
BolC9t57844H Brassica oleracea HOM05D005924 ORTHO05D007290 9.5e-16 87.4 102 53.9
SMO145G0101 Selaginella moellendorffii HOM05D005924 ORTHO05D007290 2.1e-15 86.3 151 40.4
BcaC04g19914 Brassica carinata HOM05D005924 ORTHO05D007290 2.8e-15 85.9 102 52.9
Os03g0412200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 4.1e-11 72.0 111 44.1
AagrBONN_evm.TU.Sc2ySwM_340.252 Anthoceros agrestis HOM05D005924 ORTHO05D007290 3.3e-08 62.4 106 45.3
C09p49910 Brassica napus HOM05D005924 ORTHO05D007290 1.2e-07 60.5 44 63.6
PSO210G6050 Papaver somniferum HOM05D000045 ORTHO05D000067 1.4e-06 57.0 89 44.9
Zm00001eb019850 Zea mays HOM05D005924 ORTHO05D007290 5.2e-06 55.1 114 38.6


User provided reference genes

Program Settings