Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RJI6AK Arachis hypogaea HOM05D007607 ORTHO05D009603 5.0e-65 251.1 145 100.0
Glyma.07G206400 Glycine max HOM05D007607 ORTHO05D009603 5.3e-30 134.8 155 63.9
Glyma.02G138600 Glycine max HOM05D007607 ORTHO05D009603 4.9e-28 128.3 150 60.0
Lj4g0023803 Lotus japonicus HOM05D007607 ORTHO05D009603 5.5e-27 124.8 151 60.3
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 9.3e-27 124.0 141 58.2
Lalb_Chr16g0384371 Lupinus albus HOM05D007607 ORTHO05D009603 1.5e-24 116.7 147 60.5
Psat7g119360 Pisum sativum HOM05D007607 ORTHO05D009603 3.7e-23 112.1 160 58.1
TPR.G23536 Trifolium pratense HOM05D007607 ORTHO05D009603 5.3e-22 108.2 143 60.8
Phvul.003G059800 Phaseolus vulgaris HOM05D007607 ORTHO05D009603 7.6e-21 104.4 148 58.1
Medtr4g087540 Medicago truncatula HOM05D007607 ORTHO05D009603 3.8e-20 102.1 149 58.4
VMungo0251G2348 Vigna mungo HOM05D007607 ORTHO05D009603 2.5e-19 99.4 153 54.9
Ciclev10022842m.g Citrus clementina HOM05D007607 ORTHO05D009603 7.9e-18 94.4 133 51.9
Actinidia28975 Actinidia chinensis HOM05D007607 ORTHO05D009603 4.1e-14 82.0 132 44.7
CANSAT56G1551 Cannabis sativa HOM05D007607 ORTHO05D009603 4.1e-14 82.0 139 46.8
CiPaw.02G100000 Carya illinoinensis HOM05D007607 ORTHO05D009603 6.9e-14 81.3 132 49.2
Duzib212G0637 Durio zibethinus HOM05D007607 ORTHO05D009603 1.5e-13 80.1 133 46.6
Haze_01353 Corylus avellana HOM05D007607 ORTHO05D009603 4.5e-13 78.6 131 48.9
PGR142G0203 Punica granatum HOM05D007607 ORTHO05D009603 1.7e-12 76.6 139 49.6
Atru.chr4.1481 Acer truncatum HOM05D007607 ORTHO05D009603 2.9e-12 75.9 86 62.8
Cc03_g14540 Coffea canephora HOM05D007607 ORTHO05D009603 2.9e-12 75.9 134 54.5
Gohir.D10G121500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 2.9e-12 75.9 138 47.8
Gorai.011G133600 Gossypium raimondii HOM05D007607 ORTHO05D009603 2.9e-12 75.9 138 47.8
Dinv18311 Davidia involucrata HOM05D007607 ORTHO05D009603 3.8e-12 75.5 136 50.7
Gohir.A10G145500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 3.8e-12 75.5 138 47.8
RhsimUnG0015300 Rhododendron simsii HOM05D007607 ORTHO05D009603 3.8e-12 75.5 133 45.1
Atru.chr4.1510 Acer truncatum HOM05D007607 ORTHO05D009603 5.0e-12 75.1 86 62.8
FvH4_1g00500 Fragaria vesca HOM05D007607 ORTHO05D009603 6.5e-12 74.7 131 50.4
Potri.013G128700 Populus trichocarpa HOM05D007607 ORTHO05D009603 6.5e-12 74.7 136 48.5
ClCG11G013470 Citrullus lanatus HOM05D007607 ORTHO05D009603 8.5e-12 74.3 147 48.3
Cfa015274 Carpinus fangiana HOM05D007607 ORTHO05D009603 1.4e-11 73.6 132 42.4
Rhsim02G0085800 Rhododendron simsii HOM05D007607 ORTHO05D009603 1.4e-11 73.6 136 48.5
Thecc.04G162800 Theobroma cacao HOM05D007607 ORTHO05D009603 1.4e-11 73.6 138 47.8
QL10p057428 Quercus lobata HOM05D007607 ORTHO05D009603 1.9e-11 73.2 136 49.3
QL10p057723 Quercus lobata HOM05D007607 ORTHO05D009603 1.9e-11 73.2 138 50.7
Eucgr.H00285 Eucalyptus grandis HOM05D007607 ORTHO05D009603 2.5e-11 72.8 133 49.6
TWI15G0968 Tripterygium wilfordii HOM05D007607 ORTHO05D009603 3.2e-11 72.4 132 49.2
CSS0037895 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 5.5e-11 71.6 143 45.5
CiPaw.01G169900 Carya illinoinensis HOM05D007607 ORTHO05D009603 5.5e-11 71.6 131 47.3
RcHm_v2.0_Chr2g0085131 Rosa chinensis HOM05D007607 ORTHO05D009603 7.2e-11 71.2 131 46.6
Manes.05G131900 Manihot esculenta HOM05D007607 ORTHO05D009603 9.4e-11 70.9 81 70.4
THA.LOC104813690 Tarenaya hassleriana HOM05D007607 ORTHO05D009603 2.1e-10 69.7 84 64.3
MSTRG.22043 Avicennia marina HOM05D007607 ORTHO05D009603 6.1e-10 68.2 97 56.7
Peaxi162Scf00883g00099 Petunia axillaris HOM05D007607 ORTHO05D009603 6.1e-10 68.2 132 46.2
Aqoxy2G03795 Aquilegia oxysepala HOM05D007607 ORTHO05D009603 7.9e-10 67.8 137 44.5
Cpa.g.sc343.4 Carica papaya HOM05D007607 ORTHO05D009603 7.9e-10 67.8 135 46.7
Lsat_1_v5_gn_8_9141 Lactuca sativa HOM05D007607 ORTHO05D009603 7.9e-10 67.8 86 54.7
DCAR_005451 Daucus carota HOM05D007607 ORTHO05D009603 1.4e-09 67.0 81 56.8
BcaC06g34863 Brassica carinata HOM05D007607 ORTHO05D009603 1.8e-09 66.6 90 57.8
BolC7t42778H Brassica oleracea HOM05D007607 ORTHO05D009603 1.8e-09 66.6 90 57.8
Hund12359 Selenicereus undatus HOM05D007607 ORTHO05D009603 2.3e-09 66.2 88 60.2
TAR362G0213 Trochodendron aralioides HOM05D007607 ORTHO05D009603 2.3e-09 66.2 135 46.7
Sed0020904 Sechium edule HOM05D007607 ORTHO05D009603 3.0e-09 65.9 90 50.0
Prupe.7G267000 Prunus persica HOM05D007607 ORTHO05D009603 3.9e-09 65.5 114 52.6
BraA06t24849Z Brassica rapa HOM05D007607 ORTHO05D009603 5.1e-09 65.1 79 62.0
CAN.G1237.5 Capsicum annuum HOM05D007607 ORTHO05D009603 5.1e-09 65.1 139 46.8
A07p15130 Brassica napus HOM05D007607 ORTHO05D009603 6.7e-09 64.7 82 59.8
A06p17530 Brassica napus HOM05D007607 ORTHO05D009603 8.8e-09 64.3 79 62.0
C05p20400 Brassica napus HOM05D007607 ORTHO05D009603 8.8e-09 64.3 102 52.9
GSVIVG01038189001 Vitis vinifera HOM05D007607 ORTHO05D009603 8.8e-09 64.3 137 46.7
BcaC05g26059 Brassica carinata HOM05D007607 ORTHO05D009603 1.1e-08 63.9 87 59.8
BolC5t30734H Brassica oleracea HOM05D007607 ORTHO05D009603 1.1e-08 63.9 87 59.8
CARHR021860 Cardamine hirsuta HOM05D007607 ORTHO05D009603 1.1e-08 63.9 86 60.5
Zm00001eb318610 Zea mays HOM05D007607 ORTHO05D009603 1.1e-08 63.9 80 58.8
MSTRG.24562 Avicennia marina HOM05D007607 ORTHO05D009603 1.5e-08 63.5 78 62.8
BcaB03g14267 Brassica carinata HOM05D007607 ORTHO05D009603 1.5e-08 63.5 90 55.6
Sopen12g009810 Solanum pennellii HOM05D007607 ORTHO05D009603 1.5e-08 63.5 42 76.2
PGSC0003DMG400029159 Solanum tuberosum HOM05D007607 ORTHO05D009603 1.5e-08 63.5 42 76.2
C07p22190 Brassica napus HOM05D007607 ORTHO05D009603 2.5e-08 62.8 90 56.7
Sp1g19030 Schrenkiella parvula HOM05D007607 ORTHO05D009603 2.5e-08 62.8 79 63.3
AL1G34640 Arabidopsis lyrata HOM05D007607 ORTHO05D009603 3.3e-08 62.4 78 62.8
HanXRQChr02g0059081 Helianthus annuus HOM05D007607 ORTHO05D009603 3.3e-08 62.4 45 75.6
PSO017G0391 Papaver somniferum HOM05D007607 ORTHO05D009603 3.3e-08 62.4 135 41.5
PSO675G5570 Papaver somniferum HOM05D007607 ORTHO05D009603 3.3e-08 62.4 134 38.8
Solyc12g019550.2 Solanum lycopersicum HOM05D007607 ORTHO05D009603 3.3e-08 62.4 136 41.9
CSS0042213 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 4.3e-08 62.0 149 43.0
MBI10_g16327_MAGBIO Magnolia biondii HOM05D007607 ORTHO05D009603 4.3e-08 62.0 83 60.2
Nitab4.5_0008331g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.3e-08 62.0 41 78.0
BcaB07g32146 Brassica carinata HOM05D007607 ORTHO05D009603 5.7e-08 61.6 79 59.5
MELO3C011848.2 Cucumis melo HOM05D007607 ORTHO05D009603 7.4e-08 61.2 142 43.0
Nitab4.5_0000575g0080 Nicotiana tabacum HOM05D007607 ORTHO05D009603 7.4e-08 61.2 42 76.2
ECA233G0487 Erigeron canadensis HOM05D007607 ORTHO05D009603 9.7e-08 60.8 81 46.9
Os09g0517000 Oryza sativa ssp. japonica HOM05D007607 ORTHO05D009603 9.7e-08 60.8 37 81.1
Aa31LG7G5390 Aethionema arabicum HOM05D007607 ORTHO05D009603 1.7e-07 60.1 145 44.1
AUR62002416 Chenopodium quinoa HOM05D007607 ORTHO05D009603 1.7e-07 60.1 76 50.0
Thhalv10009074m.g Eutrema salsugineum HOM05D007607 ORTHO05D009603 1.7e-07 60.1 78 61.5
MD15G1147800 Malus domestica HOM05D007607 ORTHO05D009603 1.7e-07 60.1 97 54.6
Carub.0001s2092 Capsella rubella HOM05D007607 ORTHO05D009603 2.2e-07 59.7 133 43.6
Migut.N03053 Erythranthe guttata HOM05D007607 ORTHO05D009603 2.2e-07 59.7 133 44.4
AT1G21500 Arabidopsis thaliana HOM05D007607 ORTHO05D009603 2.8e-07 59.3 78 60.3
AUR62023773 Chenopodium quinoa HOM05D007607 ORTHO05D009603 2.8e-07 59.3 139 47.5
CsaV3_5G030090 Cucumis sativus L. HOM05D007607 ORTHO05D009603 3.7e-07 58.9 149 43.0
MD02G1004100 Malus domestica HOM05D007607 ORTHO05D009603 4.8e-07 58.5 42 73.8
Ah.13g073390 Amaranthus hybridus HOM05D007607 ORTHO05D009603 6.3e-07 58.2 52 61.5
EL10Ac3g06110 Beta vulgaris HOM05D007607 ORTHO05D009603 2.4e-06 56.2 136 42.6
Sc13g0006620 Simmondsia chinensis HOM05D007607 ORTHO05D009603 2.4e-06 56.2 78 47.4
Nn7g37525 Nelumbo nucifera HOM05D007607 ORTHO05D009603 3.1e-06 55.8 42 71.4
unitig_22.g5705 Utricularia gibba HOM05D007607 ORTHO05D009603 3.1e-06 55.8 91 54.9


User provided reference genes

Program Settings